Biomedical subjects

Josef Havel

Publications and source records attributed to Josef Havel.

At least 19 recordsLinked to original sources

PubMed2006

The effect of fungicidal treatment on selected quality parameters of barley and malt.

Protection of barley grain against contamination by fungi such as Fusarium spp., particularly by those producing mycotoxins, secondary metabolites with adverse health effects, is of principal importance. Fungicides applied immediately after full heading of spring barley is one method of direct protection. In this work, extensive two-year field experiments combined with a detailed chemical laboratory analysis (barley and malt) were performed with the aim to study the effect of previous crops, different fungicides, and other conditions on the selected barley and malt quality parameters (content of beta-glucans, pentosans, oxalic acid, deoxynivalenol, and gushing), while the main task was to follow the effect of the fungicide (used as a treatment to protect against pathogens, mostly Fusarium) on changes of the chemical composition in barley and malt, and gushing. It was found that the relationship between the studied factors and the parameters usually applied to the evaluation of barley and malt quality is quite complex and not straightforward. The responses show typical features of a multifactorial influence with both positive and negative correlations resulting in a decrease or increase in grain quality (concentrations of beta-glucans, pentosans, deoxynivalenol, and other studied parameters). The role of previous crops was also found to be important. The fungicides should be applied at the time of heading but not at the very beginning of this period.

Edible Grain↗

PubMed2006

A new capillary zone electrophoresis method for the analysis of Ginkgo biloba extracts and Ginkgo biloba pharmaceutical products.

Ginkgo biloba, traditional Chinese medicine is now generally accepted. Separation and determination of active components in G. biloba is important for the product quality control. Therefore, the development of an effective and reliable separation method is important. In this work, a new capillary electrophoretic (CZE) method for separation of the G. biloba leaf extracts components was developed and optimized by the use of experimental design and artificial neural network (ANN). Under best separation conditions, in gamma-CD-modified buffer, the separation was reached within 10 min (36 mM borate BGE, pH 9.2, 1 mM gamma-CD), while the hydrodynamic mode for sample injection (2 s) and UV detection at 270 nm were applied. The method developed was validated and applied for analysis of various extracts and G. biloba products.

Cyclodextrins↗

PubMed2006

Analysis of Salvia officinalis plant extracts by capillary electrophoresis.

Salvia officinalis (commonly called Sage) and similar plants contain many compounds of pharmaceutical interest and are used as a tea or in various pharmaceutical products. In this work, the use of CE for analysis of aqueous or ethanolic extracts from various Salvia plants has been studied. Especially, several buffers like borate, phosphate, acetate, etc., were examined under different concentrations, pH, separation voltage, injection time, and other parameters to find the optimal separation conditions. The optimization was also performed using experimental design and artificial neural networks. The optimal conditions were: separation voltage +20 kV, 40 mM buffer borate, pH 9.2, injection time 5 s, and UV detection at 280 nm. A new CE method has been developed, validated, and applied to analyze samples of S. officinalis from various countries.

Buffers↗

PubMed2006

Electroosmotic flow changes due to interactions of background electrolyte counter-ions with polyethyleneimine coating in capillary zone electrophoresis of proteins.

The properties and behavior of polyethyleneimine (PEI) covalently coated capillaries with respect to different background electrolytes used in capillary zone electrophoresis (CZE) are described. The coating stability and changes of inner surface charge in the capillary were followed by measurement of electroosmotic flow (EOF). Interest was focused mainly on conjugate bases of carboxylic acids as anionic background electrolyte components (acetate, citrate, malate, malonate, tartrate, and succinate). An interesting phenomenon was observed in PEI-coated capillaries: The direction (and the magnitude) of EOF depends on the composition of the background electrolyte and at a certain pH it can undergo reversible change. Ionic complex formation was suggested as a hypothesis to explain this behavior. With this knowledge, the PEI-coated capillary was used for the separation of basic proteins in the above-mentioned background electrolytes. A standard protein mixture of cytochrome c, ribonuclease A, and lysozyme at a concentration of 0.25 mg/mL each was chosen as model sample.

Electrolytes↗

PubMed2006

Laser desorption/ionization and laser ablation synthesis of new selenium oxide compounds from selenium(IV) dioxide.

Laser desorption/ionization (LDI) and/or laser ablation (LA) of selenium dioxide crystals or its mixtures with sodium peroxide were studied using a commercial matrix-assisted laser desorption/ionization time-of-flight (MALDI-TOF) mass spectrometer. It was found that LDI and LA of selenium (IV) dioxide not only ionizes SeO(2), but also leads to the formation of several positively and negatively singly charged species: SeO(n) (+) (n = 0-2), Se(2) (+), SeO(n) (-) (n = 0-4), Se(2)O(n) (-) (n = 3-7), Se(3)O(n) (-) (n = 4-9), Se(4)O(n) (-) (n = 8-10). A rather high yield of selenium species in the positive ion mode, Se(m) (+) (m = 1-8) and Se(m)OH(+) (m = 3-7), was obtained by using the MALDI approach while the species detected in the negative ion mode, SeO(n) (-) (n = 0-4), Se(2)O(n) (-) (n = 3-7), Se(3)O(n) (-) (n = 4-9), and Se(4)O(n) (-) (n = 9, 10), were the same as those observed during LDI/LA of selenium dioxide. The addition of sodium peroxide to selenium dioxide with the aim of enhancing its oxidation and thus increasing the production of SeO(4) product resulted in extensive cationization of the species with sodium or potassium. The following positively and negatively charged species were identified: Se(+), Se(2) (+), Se(2)OH(+), Se(2)ONa(+), SeO(n) (-) (n = 0-3), and Se(2)O(n) (-) (n = 0, 1, 4). Also observed in mass spectra of such mixtures, various mixed sodium and/or potassium adducts with selenium oxide species, e.g. Se(2)O(4)K(2)Na(-), were identified. In all, 26 totally new species, Se(2)O(n) (-) (n = 3-6), Se(3)O(n) (-) (n = 4-9), Se(4)O(n) (-) (n = 8-10), Se(4)O(11)H(5) (-), Se(4)O(12)H(3) (-), Se(2)O(4)Na(-), Se(2)O(5)HNa(-), Se(2)O(5)HNa(2) (-), Se(3)O(6)K(2)Na(-), Se(3)O(6)K(2)Na(2) (-), Se(2)ONa(+), and Se(m)OH(+) (m = 3-7), were described for the first time. Also, for the first time, the formation of selenium(IV) diperoxide, O-O-Se-O-O or O(2)SeO(2), is described. The stoichiometries of the compounds generated were confirmed using isotopic pattern modeling.

Journal Article↗

PubMed2006

New possibilities of matrix-assisted laser desorption ionization time of flight mass spectrometry to analyze barley malt quality. Highly sensitive detection of mycotoxins.

The occurrence of mycotoxins in agricultural commodities is a major health concern for livestock, humans, and the environment. Barley and subsequently malt quality is of fundamental importance to obtain good quality beer. Classical methods of analysis often require tedious, laborious, and expensive processes. Matrix-assisted laser desorption ionization time of flight mass spectrometry (MALDI-TOF MS) instrumentation enables highly sensitive and fast analysis and/or detection using a very small sample. The possibilities of MALDI-TOF MS for he identification and/or detection of trichothecene mycotoxins (deoxynivalenol (DON) and nivalenol (NIV), respectively) in barley malt were examined, and it was found that almost all classical MALDI matrices failed to ionize the compounds being studied. This detailed study of the ionization conditions and the search for unconventional matrices led to the discovery of suitable MALDI matrices, which enable ionization of trichothecene mycotoxins. These were: fine powdered synthetic diamond, sodium azide, or hydrazine hydrate. It is possible to detect 8.5 x 10(-12) mol (2.5 ng) of deoxynivalenol or 64 x 10(-12) mol (20 ng) of nivalenol in just 1 microL of barley malt extract (equivalent to 600 microg of DON in 1 kg of barley malt). The procedure developed enables fast determination of DON and NIV in barley, malt, or similar products.

Beer↗

PubMed2005

Optimization of solid-phase extraction using artificial neural networks in combination with experimental design for determination of resveratrol by capillary zone electrophoresis in wines.

Solid-phase extraction (SPE) is often used for preconcentration of analytes from biological samples. Such an analytical step requires optimization for obtaining reliable results. Optimization in analytical chemistry is traditionally still often done with relaxation method, when an optimal value of a single variable is searched for (single variable approach (SVA)). However, if the optimized procedure is complex, there is a danger not to find the real optimum by SVA. Therefore, more advanced optimization approaches should be applied-multivariable approach (MVA). Applying MVA optimization and finding the real optimum, better experimental conditions are obtained and thus, time, chemicals and analytical procedure cost can be served. Nowadays, using artificial neural networks (ANN's) in combination with MVA is rapidly expanding. In this work, the optimization of SPE using relaxation method (SVA) and optimization by ANN's in combination with experimental design (MVA) are compared and latter approach is practically illustrated. Advantages of MVA over SVA for optimization are discussed. The prediction of the optimal SPE conditions for determination cis- and trans-resveratrol in Australian wines by capillary zone electrophoresis is described and the improvement of efficiency of SPE using MVA is confirmed.

Chemical Fractionation↗

PubMed2005

Optimisation of high performance liquid chromatography separation of neuroprotective peptides. Fractional experimental designs combined with artificial neural networks.

The study of experimental design conjunction with artificial neural networks for optimisation of isocratic ion-pair reverse phase HPLC separation of neuroprotective peptides is reported. Different types of experimental designs (full-factorial, fractional) were studied as suitable input and output data sources for ANN training and examined on mixtures of humanin derivatives. The independent input variables were: composition of mobile phase, including its pH, and column temperature. In case of a simple mixture of two peptides, the retention time of the most retentive component and resolution were used as the dependent variables (outputs). In case of a complex mixture with unknown number of components, number of peaks, sum of resolutions and retention time of ultimate peak were considered as output variables. Fractional factorial experimental design has been proved to produce sufficient input data for ANN approximation and thus further allowed decreasing the number of experiments necessary for optimisation. After the optimal separation conditions were found, fractions with peptides were collected and their analysis using off-line matrix assisted laser desorption/ionisation time of flight mass spectrometry (MALDI-TOF-MS) was performed.

Amino Acid Substitution↗

PubMed2005

Laser ablation generation of cluster ions from concentrated sulfuric and selenic acids.

The generation and identification of novel homo- and hetero-polyacid clusters was achieved using a standard matrix-assisted laser desorption/ionization time-of-flight (MALDI-TOF) mass spectrometer. The formation of several singly charged species was achieved via the interaction of a laser beam with concentrated sulfuric acid, selenic acid or their mixtures, applied on a graphite microcrucible. A higher yield of the species was observed in the negative detection mode, where sulfuric acid adducts HSO(4) (-) . mH(2)SO(4) (m = 0-3) and HSO(4) (-) . mH(2)SO(4) . SO(3) (m = 1, 2), and selenic acid adducts HSeO(4) (-), HSeO(4) (-) . X (X = SeO(3), H(2)SeO(4), 2SeO(3), H(2)SO(4) . SeO(3)) and NaSeO(4) (-). Y (Y = H(2)SeO(4), H(2)SeO(4). SeO(3), 2H(2)SO(4), H(2)SeO(4) . 2SeO(3), 2H(2)SeO(4) . SeO(3), 3H(2)SeO(4)), were identified. In the mass spectra of the mixture of acids, besides the homo-polyacidic adducts, eleven mixed species containing both sulfuric and selenic acid molecules or ions were identified, of which the heaviest was found to correspond to NaSeO(4) (-) . H(2)SeO(4) . 3SO(3). The stoichiometry of the species was confirmed using isotopic pattern modeling.

Journal Article↗

PubMed2005

Laser ablation synthesis of selenium superoxide anion SeO4- via selenium trioxide photolysis. Time-of-flight mass spectrometry and ab initio calculations.

Laser desorption/ionisation and laser ablation of solid selenium trioxide, as well as the gas-phase behaviour of selenium trioxide, were studied. Selenium trioxide undergoes photochemical decomposition and, from the mass spectra obtained by laser desorption/ionisation time-of-flight mass spectrometry (LDI-TOF-MS), the following species were identified: O-, O2-, O3-, SeO-, SeO2-, SeO3-, SeO4-, Se2O7-, Se3O11-, and Se4O14-. Formation of the selenium superoxide SeO4- anion is described in this work for the first time. In addition, low-abundance selenium species such as Se2O8H2-, Se3O11H-, and Se4O15H2- were also detected. The stoichiometry of all ions was confirmed via isotopic pattern modeling and/or post-source decay (PSD) analysis. Photolysis of selenium trioxide leads partly to ozone formation. It was found that the most likely mechanisms of selenium superoxide formation are oxidation of selenium trioxide with ozone and/or reactive oxygen radicals, or photolysis of selenium trioxide tetramer (SeO3)4. Therefore, ab initio calculations were performed to support the mass spectrometric evidence and to suggest probable geometries for selenium superoxide anion SeO4- and diselenium superoxide anion Se2O7-, as well as to provide insight into and/or predict possible formation pathways. It has been found that both cyclic and non-cyclic peroxide structures of SeO4- and Se2O7- ions are possible. In addition, the SeO4 structure was also calculated guided by thermodynamic considerations using Gaussian-2 methodology, and the inferred stability of the SeO4 neutral molecule was supported by ab initio calculations.

Journal Article↗

PubMed2005

Spectroscopic characterization of Eu(III) complexes with new monophosphorus acid derivatives of H(4)dota.

The luminescence lifetimes of europium(III) complexes with new monophosphorus acid derivatives of H(4)dota were measured by means of time-resolved laser-induced luminescence spectroscopy in H(2)O and D(2)O. The hydration numbers of these complexes were estimated using different empirical equations [Horrocks and Sudnick (1979) J. Am. Chem. Soc. 101 (1979) 334; Choppin and Barthelemy(1989) Inorg. Chem. 28, 3354-3357; Choppin and Bünzli Lanthanide probes in life, chemical and earth sciences. Theory and practice (1989); Kimura and Kato J. Alloys Comp. 275-277 (1998) 806; Parker (1999) J. Chem. Soc., Perkin Trans. 2, 493-503; Supkowski and Horroks (2002) Inorg. Chim. Acta. 340, 44-48]. It was shown that all the relationships gave similar results with a satisfactory precision. The hydration numbers of complexes of H(3)do3a and H(4)dota agreed with the literature values. One water molecule is coordinated in complexes of the new ligands. The results showed that the Choppin formula based on measurements only in H(2)O can be satisfactorily used for estimation of the hydration numbers.

Journal Article↗

PubMed2004

Humic acids from oxidized coals I. Elemental composition, titration curves, heavy metals in HA samples, nuclear magnetic resonance spectra of HAs and infrared spectroscopy.

The formation of humic acids (HAs) from bituminous coal was verified by laboratory oxidation. In a relatively short time the oxidation by air at temperature above 150 degrees C led to the formation of HAs. These HAs were compared with those isolated from oxidized bituminous coal from the vicinity of red bed bodies, from weathered bituminous coal, oxihumolite and lignite. For this the organic and inorganic elemental composition of HAs, apparent dissociation constants, metal-binding capacities, nuclear magnetic resonance and infrared spectra were determined and evaluated. With increasing temperature of laboratory oxidation of bituminous coal the percentage of aromaticity of HAs increases. HAs prepared from coal oxidized at 150 degrees C are characterized by an aromaticity index 78% while for HAs prepared at 250 and 300 degrees C by 95% aromaticity. The same index for HAs isolated from naturally oxidized bituminous coals is of about 87% whereas it is of about 50% for oxihumolite and lignite. The apparent dissociation constants (Kapp) are much higher in HAs isolated from oxihumolite and lignite (pKapp from 3.35 to 3.80) than those from oxidized bituminous coal samples (pKapp from 4.47 to 4.85). There is a good negative correlation between Pb-binding capacity and pKapp of all samples suggesting that metallic ions are bonded to acidic groups of HAs. Also contents of inorganic elements like Fe, Al, Si are much higher in HAs isolated from lignite and oxihumolite than those in HAs from oxidized bituminous coal. Thus, it seems that the temperatures below 150 degrees C and the long oxidation time are necessary conditions for the formation of HAs in oxidative altered bituminous coal deposited deeply under the earth surface.

Coal↗

PubMed2003

Separation and characterization of humic acids from Antarctica by capillary electrophoresis and matrix-assisted laser desorption ionization time-of-flight mass spectrometry. Inclusion complexes of humic acids with cyclodextrins.

A new capillary electrophoresis procedure based on micellar electrokinetic capillary chromatography for the separation of humic acids (HAs) isolated from Antarctica soil was developed. The HAs were separated and characterized using a background electrolyte containing 0.09 M borate+0.09 M Tris+0.001 M EDTA (BTE) of pH 8.3, modified with alpha-, beta-, or gamma-cyclodextrins (CDs) and sodium dodecyl sulfate. It was found that from alkaline solution of HAs in the presence of CDs, the HAs are not completely precipitated with a strong acid and a certain part (some fractions) remains soluble. Mass spectrometry shows that HAs contain 15-25 simple low-Mr compounds and several families of compounds with similar structure (m/z approximately 800-1200). Comparison of HA analysis from Antarctica soil with those of soil HAs from the American continent show a high similarity between the samples and confirm several identical compounds and some with very similar structural units.

Antarctic Regions↗

PubMed2003

High thermodynamic stability and extraordinary kinetic inertness of copper(II) complexes with 1,4,8,11-tetraazacyclotetradecane-1,8-bis(methylphosphonic acid): example of a rare isomerism between kinetically inert penta- and hexacoordinated copper(II) complexes.

In an aqueous solution at room temperature, 1,4,8,11-tetraazacyclotetradecane-1,8-bis(methylphosphonic acid) (H(4)L(1)) and Cu(I) (I) form a pentacoordinated (pc) complex, pc-[Cu(L(1))](2-), exhibiting conformation I of the cyclam ring. At high temperature, the complex isomerises to a hexacoordinated isomer, trans-O,O-[Cu(L(1))](2-), with a trans-III conformation of the cyclam ring. In pc-[Cu(L(1))](2-), four ring nitrogen atoms and one phosphonate oxygen atom are arranged around Cu(I) (I) in a structure that is half-way between a trigonal bipyramid and a tetragonal pyramid, with one phosphonic acid group uncoordinated. In the trans-O,O-[Cu(L(1))](2-) isomer, the nitrogen atoms form a plane and the phosphonic acid groups are in a mutually trans configuration. A structurally very similar ligand, 4-methyl-1,4,8,11-tetraazacyclotetradecane-1,8-bis(methylphosphonic acid) (H(4)L(2)), forms an analogous pentacoordinated complex, pc-[Cu(L(2))](2-), at room temperature. However, the complex does not isomerise to the octahedral complex analogous to trans-O,O-[Cu(L(1))](2-). Because of the high thermodynamic stability of pc-[Cu(L(1))](2-), (logbeta=25.40(4), 25 degrees C, I=0.1 mol dm(-3) KNO(3)) and the formation of protonated species, Cu(I) (I) is fully complexed in acidic solution (-log [H(+)] approximately 3). Acid-assisted decomplexation of both of the isomers of [Cu(H(2)L(1))] takes place only after protonation of both uncoordinated oxygen atoms of each phosphonate moiety and at least one nitrogen atom of the cycle. The exceptional kinetic inertness of both isomers is illustrated by their half-lives tau(1/2)=19.7 min for pc-[Cu(H(2)L(1))] and tau(1/2) about seven months for trans-O,O-[Cu(H(2)L(1))] for decomplexation in 5 M HClO(4) at 25 degrees C. The mechanism of formation of pc-[Cu(L(1))](2-) is similar to those observed for other macrocyclic complexes.

Journal Article↗

PubMed2003

Capillary electrophoresis determinations of trace concentrations of inorganic ions in large excess of chloride: soft modelling using artificial neural networks for optimisation of electrolyte composition.

In this work, using a combination of experimental design (ED) and artificial neural networks (ANN), the composition of a triethanolamine-buffered chromate electrolyte was optimised for determination of sulphate anions in the presence of high chloride excess. The optimal electrolyte, allowing a baseline-resolved separation of sulphate from chloride present in a 1500 multiple excess in less than 170 s, consists of 10 mmol/L CrO(3), 2 mmol/L hexamethonium hydroxide, 10% methanol, and triethanolamine added to adjust the pH to 8.0. The method is suitable to a wide concentration range of chloride (4-1757 mg/L) and sulphate (4-590 mg/L) with linear calibration plots (R(2) = 0.9937-0.9999). Relative standard deviations are less than 2.0% for both anions for migration times and peak areas. The detection limits (hydrodynamic injection of 1 s) were 0.6 mg/L for sulphate and 0.5 mg/L for chloride. The method was successfully applied to determination of sulphate in mineral waters containing a high chloride concentration and to determination of sulphate traces in an anticancer drug injection preparation containing a physiological level of chloride. It was shown that alpha-cyclodextrin as an electrolyte additive has a significant potential for further increasing the separation selectivity for inorganic anions.

Anions↗

PubMed2003

Quantification of analytes in overlapping peaks from capillary electrophoresis using multivariate curve resolution-alternating least squares methods.

Application of multivariate curve resolution with alternating least squares (ALS) methods to second-order data from capillary electrophoresis diode array detector (CE-DAD) is shown. Second-order data are easily obtained by setting individual data matrix of CE run one in top of the other. Initial qualitative solutions obtained by evolving factor analysis can be further optimized by simultaneous analysis of multiple electrophoresis run data with ALS regression. Quantification is achieved by the comparison of the analyte peak areas with that of pure standards. During the ALS regression procedure, the following constraints were applied: (i) both concentrations and unit pure spectra of the resolved components must be positive; (ii) elution profiles have an unimodal shape; (iii) correspondence exists between common species in the different data matrices; (iv) the pure spectrum of each species is the same in all runs where it is present. The above methods were applied for the determination of dinitrotoluene (DNT) isomeric compounds in overlapping peaks from CE.

Dinitrobenzenes↗

PubMed2003

Quantitative chiral analysis in capillary electrophoresis from unresolved peaks using derivative electropherograms, experimental design, and artificial neural networks.

Quantitative capillary electrophoretic analysis of chiral compounds might be difficult or even impossible when baseline separation is not reached. In this work, the use of n-th derivative of the electropherogram was studied and examined on model and experimental data. The electropherograms should be first smoothed using Savitzky-Golay method and the quantitative analysis is then possible using either a graphical method or multivariate calibration applying a combination of experimental design (ED) and artificial neural networks (ANNs). The best results were obtained for the first derivative, higher derivatives are not suitable because of noise accumulation. The method was applied to real experimental data to quantify chiral amino acids from unresolved peaks, but it is applicable for quantitative analysis of any other chiral analytes from poorly resolved peaks. Precision of analysis from partially resolved peaks reached was about +/- 3.2% relative standard deviation.

Amino Acids↗

PubMed2002

Evaluation of calibration data in capillary electrophoresis using artificial neural networks to increase precision of analysis.

Increase of precision in capillary electrophoresis can be achieved applying suitable markers and evaluating calibration curves and data analysis with artificial neural networks. They are able to account for errors in both x- and y-axes, nonlinear response of detector and non-linearity of calibration curves eventually. A comparison of the artificial neural networks approach with ordinary least-squares (OLS) and bivariate least-squares regression (BLS) was done. While OLS and BLS give similar results, the method proposed and tested in analysis of several pharmaceutical products yields lower prediction errors than traditional linear least-squares methods and the precision of analysis was found in the range 0.5-1.5% relative.

Calibration↗