PubMed Health⌕ Search

Biomedical subjects

K Schmidt-Rohr

Publications and source records attributed to K Schmidt-Rohr.

23 records · Page 2Linked to original sources

Coupling amplification in 2D MAS NMR and its application to torsion angle determination in peptides.

A technique for amplifying the apparent magnitudes of 13C-1H and 15N-1H dipolar interactions in magic-angle spinning experiments is described. By inserting rotor-synchronized 180 degrees pulses in the evolution period of a 2D dipolar-chemical shift experiment, heteronuclear dipolar couplings are doubled or quadrupled relative to the spinning speed. The increased number of dipolar sidebands is desirable for retaining structural information in the indirectly detected dipolar dimension while resolving inequivalent sites in the isotropic chemical shift dimension at relatively high spinning speeds. This coupling amplification method is incorporated into an experiment that determines the peptide torsion angle phi through the relative orientation of the Calpha-Halpha and N-HN bonds. It is shown both experimentally and theoretically that the angular resolution of the measurement is enhanced significantly by the selective doubling of the N-HN coupling.

Chemical Phenomena↗

Conformational constraints on the headgroup and sn-2 chain of bilayer DMPC from NMR dipolar couplings.

This paper presents new NMR constraints on the conformation of the headgroup, glycerol backbone, and sn-2 chain of 1,2-dimyristoyl-sn-glycero-3-phosphatidylcholine (DMPC) in the liquid-crystalline bilayer. Using two-dimensional 13C-1H chemical shift correlation spectroscopy, we find significant dipolar couplings between the carboxyl carbon CO2 and the headgroup protons. This indicates that a conformation in which the DMPC headgroup and the beginning of the sn-2 chain bend toward each other is significantly populated in the fluid bilayer. The predominance of this headgroup orientation can be further confirmed by 31P-13C dipolar couplings from the literature, which constrain the glycerol G2-G3 torsion angle to be close to trans, excluding a significant presence of one of the two conformations found in the DMPC crystal. Combining and reexamining 20 known NMR couplings for the glycerol backbone and its adjacent segments of L alpha-DMPC, we find that several torsion angles and bond orientations in the core of the DMPC molecule are constrained severely and must differ from those in the crystal structure. We propose a consistent molecular model for phosphocholine lipids in the liquid-crystalline phase, with a rigid backbone in the core of the molecule, a bent-back headgroup, and increasing mobility toward the ends of the acyl chains and the headgroup.

Dimyristoylphosphatidylcholine↗

Study of phospholipid structure by 1H, 13C, and 31P dipolar couplings from two-dimensional NMR.

Various motionally averaged 31P-1H, 13C-1H, 1H-1H, and 31P-13C dipolar couplings were measured for natural-abundance and unoriented phosphocholine in the L alpha phase. The couplings were obtained and assigned by a variety of advanced and partly novel two-dimensional solid-state NMR experiments. Whereas 31P-1H and 31P-13C dipolar couplings provide long-range structural constraints, geminal 1H-1H couplings and the signs of 13C-1H couplings are important new elements in a segmental order-tensor analysis of the lipid headgroup and glycerol backbone. The implications of these measured dipolar couplings for the conformational exchange of the lipid headgroup and the bending of the headgroup from the glycerol backbone are discussed. These dipolar couplings are also analyzed semiquantitatively in terms of the segmental order tensor.

Biophysical Phenomena↗

High-sensitivity multinuclear NMR spectroscopy of a smectite clay and of clay-intercalated polymer.

The nuclear magnetic resonance (NMR) properties of a smectite clay low in paramagnetic ions, and NMR experiments to detect organic material near the silicate surfaces with high sensitivity, have been explored by 1H, 29Si, and 13C NMR. In oven-dried hectorite clay, 1H NMR reveals a sharp signal at 0.35 ppm that narrows significantly with spinning speed. It is assigned to the "inner" OH protons of the silicate layers. In fluorohectorite, where the OH groups are replaced by fluorines, no such 1H peak is observed. The assignment is further confirmed by the efficient cross-polarization observed in two-dimensional (2D) 1H-29Si HETCOR spectra, and by 29Si-detected REDOR experiments with 1H-dephasing in the 29Si dipolar field, which yield a 1H-29Si distance of 2.9 + 0.4 A. In these 1H-29Si experiments, the sensitivity of the 29Si signal is enhanced at least fivefold by refocusing the decay resulting from the inhomogeneous broadening of the single 29Si peak, stretching the 29Si signal out over 80 ms. The small 1H linewidth of this signal at spinning frequencies exceeding 4 kHz is attributed to the large proton-proton distances in the clay. The upfield isotropic chemical shift of the OH groups is explained by their inaccessibility to hydrogen-bonding partners, as a result of their location in hexagonal "cavities" of the clay structure. The well-resolved, easily selectable OH-proton signal and the high-sensitivity 29Si detection open excellent perspectives for NMR studies of composites of clays with organic molecules. Two-dimensional 1H-29Si and 1H-1H chemical-shift correlation experiments enable efficient detection of the 1H spectrum of organic segments near the clay surface. Combined with 1H spin diffusion, the organic segments at up to several nanometers from the clay surfaces can be probed. A 2D 1H-13C correlation experiment yields the 13C spectrum of the organic species near the clay surfaces. A mobility gradient of intercalated poly(ethylene oxide), PEO, segments is proven in 1H-3Si WISE experiments with spin diffusion.

Aluminum Silicates↗