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K V Lakshmi

Publications and source records attributed to K V Lakshmi.

13 recordsLinked to original sources
PubMed2006

Aqueous spectroscopy and redox properties of carboxylate-bound titanium.

The aqueous chemistry of Ti(III) and Ti(IV) in two different chemical environments is investigated given its relevance to environmental, materials, and biological chemistry. Complexes of titanium with the carboxylate ligands citrate and oxalate, found ubiquitously in Nature, were synthesized. The redox properties were studied by using cyclic voltammetry. All the titanium citrate redox couples are quasi-reversible. Electrospray mass spectrometry of the Ti(III) citrate solution shows the presence of a 1:2 Ti/cit complex in solution, in contrast to the predominant 1:3 Ti/cit complex with Ti(IV). The change in the coordination of the ligand to the metal on reduction may explain the quasi-reversible behavior of the electrochemistry. The redox potentials for Ti(IV) citrate in water vary with pH. At pH 7, the approximate E(1/2) is less than -800 mV. This stated change in redox properties is considered in light of the previously reported Ti(IV) citrate solution speciation. Analogous speciation behavior is suggested from the EPR spectroscopy of Ti(III) citrate aqueous solutions. The g tensors are deduced for several pH-dependent species from the simulated data. The X-ray crystal structure of a Ti(III)(2) oxalate dimer Ti(2)(mu-C(2)O(4))(C(2)O(4))(2)(H(2)O)(6).2H(2)O (3), which crystallizes from water below pH 2, is reported. Complex 3 crystallizes in a monoclinic P2(1)/c space group with a = 9.5088(19) Angstroms, b = 6.2382(12) Angstroms, c = 13.494(3) Angstroms, V = 797.8(3) Angstroms(3), and Z = 2. The infrared spectroscopy, EPR spectroscopy, and cyclic voltammetry on complex 3 are reported. The cyclic voltammetry shows an irreversible redox couple approximately -196 mV which likely corresponds to the Ti(IV)(2)/Ti(III)Ti(IV) couple. The EPR spectroscopy on solid complex 3 shows a typical S = 1 triplet-state spectrum. The solid follows non-Curie behavior, and the antiferromagnetic coupling between the two metal centers is determined to be -37.2 cm(-1). However, in solution the complex follows Curie behavior and supports a Ti(III)Ti(IV) oxidation state for the dimer.

Carboxylic Acids↗
PubMed2005

Bidirectional electron transfer in photosystem I: direct evidence from high-frequency time-resolved EPR spectroscopy.

Efficient charge separation occurring within membrane-bound reaction center proteins is the most important step of photosynthetic solar energy conversion. All reaction centers are classified into two types, I and II. X-ray crystal structures reveal that both types bind two symmetric membrane-spanning branches of potential electron-transfer cofactors. Determination of the functional roles of these pairs of branches is of fundamental importance. While it is established that in type II reaction centers only one branch functions in electron transfer, we present the first direct spectroscopic evidence that both cofactor branches are active in the type I reaction center, photosystem I.

Electron Spin Resonance Spectroscopy↗
PubMed2004

Q-band EPR of the S2 state of photosystem II confirms an S = 5/2 origin of the X-band g = 4.1 signal.

Disagreement has remained about the spin state origin of the g = 4.1 EPR signal observed at X-band (9 GHz) from the S2 oxidation state of the Mn cluster of Photosystem II. In this study, the S2 state of PSII-enriched membrane fragments was examined at Q-band (34 GHz), with special interest in low-field signals. Light-induced signals at g = 3.1 and g = 4.6 were observed. The intensity of the signal at g = 3.1 was enhanced by the presence of F- and suppressed by the presence of 5% ethanol, indicating that it was from the same spin system as the X-band signal at g = 4.1. The Q-band signal at g = 4.6 was also enhanced by F-, but not suppressed by 5% ethanol, making its identity less clear. Although it can be accounted for by the same spin system, other sources for the signal are considered. The observation of the signal at g = 3.1 agrees well with a previous study at 15.5 GHz, in which the X-band g = 4.1 signal was proposed to arise from the middle Kramers doublet of a near rhombic S = 5/2 system. Zero-field splitting values of D = 0.455 cm(-1) and E/D = 0.25 are used to simulate the spectra.

Electron Spin Resonance Spectroscopy↗
PubMed2003

Pulsed high-frequency EPR study on the location of carotenoid and chlorophyll cation radicals in photosystem II.

When the primary electron-donation pathway from the water-oxidation complex in photosystem II (PS II) is inhibited, chlorophyll (Chl(Z) and Chl(D)), beta-carotene (Car) and cytochrome b(559) are alternate electron donors that are believed to function in a photoprotection mechanism. Previous studies have demonstrated that high-frequency EPR spectroscopy (at 130 GHz), together with deuteration of PS II, yields resolved Car(+) and Chl(+) EPR signals (Lakshmi et al. J. Phys. Chem. B 2000, 104, 10 445-10 448). The present study describes the use of pulsed high-frequency EPR spectroscopy to measure the location of the carotenoid and chlorophyll radicals relative to other paramagnetic cofactors in Synechococcus lividus PS II. The spin-lattice relaxation rates of the Car(+) and Chl(+) radicals are measured in manganese-depleted and manganese-depleted, cyanide-treated PS II; in these samples, the non-heme Fe(II) is high-spin (S = 2) and low-spin (S = 0), respectively. The Car(+) and Chl(+) radicals exhibit dipolar-enhanced relaxation rates in the presence of high-spin (S = 2) Fe(II) that are eliminated when the Fe(II) is low-spin (S = 0). The relaxation enhancements of the Car(+) and Chl(+) by the non-heme Fe(II) are smaller than the relaxation enhancement of Tyr(D)(*) and P(865)(+) by the non-heme Fe(II) in PS II and in the reaction center from Rhodobactersphaeroides, respectively, indicating that the Car(+)-Fe(II) and Chl(+)-Fe(II) distances are greater than the known Tyr(D)(*)-Fe(II) and P(865)(+)-Fe(II) distances. The Car(+) radical exhibits a greater relaxation enhancement by Fe(II) than the Chl(+) radical, consistent with Car being an earlier electron donor to P(680)(+) than Chl. On the basis of the distance estimates obtained in the present study and by analogy to carotenoid-binding sites in other pigment-protein complexes, possible binding sites are discussed for the Car cofactors in PS II. The relative location of Car(+) and Chl(+) radicals determined in this study provides valuable insight into the sequence of electron transfers in the alternate electron-donation pathways of PS II.

Binding Sites↗
PubMed2002

Correlation of the cytochrome c (550) content of cyanobacterial Photosystem II with the EPR properties of the oxygen-evolving complex.

The Mn(4) cluster of PS II advances through a series of oxidation states (S states) that catalyze the breakdown of water to dioxygen in the oxygen-evolving complex. The present study describes the engineering and purification of highly active PS II complexes from mesophilic His-tagged Synechocystis PCC 6803 and purification of PS II core complexes from thermophilic wild-type Synechococcus lividus with high levels of the extrinsic polypeptide, cytochrome c (550). The g = 4.1 S(2) state EPR signal, previously not characterized in untreated cyanobacterial PS II, is detected in high yields in these PS II preparations. We present a complete characterization of the g = 4.1 state in cyanobacterial His-tagged Synechocystis PCC 6803 PS II and S. lividus PS II. Also presented are a determination of the stoichiometry of cytochrome c (550) bound to His-tagged Synechocystis PCC 6803 PS II and analytical ultracentrifugation results which indicate that cytochrome c (550) is a monomer in solution. The temperature-dependent multiline to g = 4.1 EPR signal conversion observed for the S(2) state in cyanobacterial PS II with high cytochrome c (550) content is very similar to that previously found for spinach PS II. In spinach PS II, the formation of the S(2) state g = 4.1 EPR signal has been found to correlate with the binding of the extrinsic 17 and 23 kDa polypeptides. The finding of a similar correlation in cyanobacterial PS II with the binding of cytochrome c (550) suggests a functional homology between cytochrome c (550) and the 17 and 23 kDa extrinsic proteins of spinach PS II.

Journal Article↗
PubMed2001

Factors that determine the unusually low reduction potential of cytochrome c550 in cyanobacterial photosystem II.

A new purification protocol for cytochrome c550 (cyt c550) from His-tagged SYnechocYstis PCC 6803 photosystem II (PSII) was developed which allows the protein to be isolated in high yield and purity. Electron paramagnetic resonance spectroscopy of cyt c550, both free in solution and in intact PSII preparations, yields identical spectra with g values at 1.50, 2.23, and 2.87, which are characteristic for a ferric low-spin bis-histidine coordinated heme. The resonance Raman spectrum of the isolated protein exhibits features characteristic of bis-histidine axial ligation of the iron and a slight ruffling of the heme macrocycle. Together, these results indicate that the heme structure is not very different from most c-type cytochromes, and thus the structure of the heme does not account for its unusually low reduction potential. A direct electrochemical measurement of the reduction potential was performed using square wave voltammetry on a pyrolytic graphite edge electrode, yielding E1.2=-108 mV (vs. NHE) with a peak separation of 5 mV. This value is 150 mV more positive than that previously measured by redox titrations. Because the behavior of the protein in the electrochemistry experiments is indicative of adsorption to the electrode surface, we surmise that binding of the protein to the electrode excludes solvent water from the heme-binding site. We conclude that the degree of solvent exposure makes a significant contribution to the heme reduction potential. Similarly, the binding of cyt c550 to PSII may also reduce the solvent exposure of the heme, and so the direct electrochemical value of the reduction potential may be relevant to the protein in its native state.

Cyanobacteria↗
PubMed2001

Pulsed electron paramagnetic resonance methods for macromolecular structure determination.

Pulsed electron paramagnetic resonance (EPR) distance measurement techniques target macromolecular structure elucidation at both the local and global level. Recent developments in pulse microwave technology and high-field EPR have led to the development of a variety of pulsed EPR distance measurement techniques. These methods have emerged as powerful tools for the determination of structure/function relationships in macromolecular systems. In this review article, we discuss recent applications of long-range and short-range EPR distance measurements.

Animals↗
PubMed1999

Location of the iron-sulfur clusters FA and FB in photosystem I: an electron paramagnetic resonance study of spin relaxation enhancement of P700+.

Photosystem I (PS I) mediates electron-transfer from plastocyanin to ferredoxin via a photochemically active chlorophyll dimer (P700), a monomeric chlorophyll electron acceptor (A0), a phylloquinone (A1), and three [4Fe-4S] clusters (FX/A/B). The sequence of electron-transfer events between the iron-sulfur cluster, FX, and ferredoxin is presently unclear. Owing to the presence of a 2-fold symmetry in the PsaC protein to which the iron-sulfur clusters F(A) and F(B) are bound, the spatial arrangement of these cofactors with respect to the C2-axis of symmetry in PS I is uncertain as well. An unequivocal determination of the spatial arrangement of the iron-sulfur clusters FA and FB within the protein is necessary to unravel the complete electron-transport chain in PS I. In the present study, we generate EPR signals from charge-separated spin pairs (P700+-FredX/A/B) in PS I and characterize them by progressive microwave power saturation measurements to determine the arrangement of the iron-sulfur clusters FX/A/B relative to P700. The microwave power at half saturation (P1/2) of P700+ is greater when both FA and FB are reduced in untreated PS I than when only FA is reduced in mercury-treated PS I. The experimental P1/2 values are compared to values calculated by using P700-FA/B crystallographic distances and assuming that either FA or FB is closer to P700+. On the basis of this comparison of experimental and theoretical values of spin relaxation enhancement effects on P700+ in P700+ [4Fe-4S]- charge-separated pairs, we find that iron-sulfur cluster FA is in closer proximity to P700 than the FB cluster.

Chlorophyll↗
PubMed1999

Orientation of the tetranuclear manganese cluster and tyrosine Z in the O(2)-evolving complex of photosystem II: An EPR study of the S(2)Y(Z)(*) state in oriented acetate-inhibited photosystem II membranes.

Inhibitory treatment by acetate, followed by illumination and rapid freezing, is known to trap the S(2)Y(Z)(*) state of the O(2)-evolving complex (OEC) in photosystem II (PS II). An EPR spectrum of this state exhibits broad split signals due to the interaction of the tyrosyl radical, Y(Z)(*), with the S = 1/2 S(2) state of the Mn(4) cluster. We present a novel approach to analyze S(2)Y(Z)(*) spectra of one-dimensionally (1-D) oriented acetate-inhibited PS II membranes to determine the magnitude and relative orientation of the S(2)Y(Z)(*) dipolar vector within the membrane. Although there exists a vast body of EPR data on isolated spins in oriented membrane sheets, the present study is the first of its kind on dipolar-coupled electron spin pairs in such systems. We demonstrate the feasibility of the technique and establish a rigorous treatment to account for the disorder present in partially oriented 1-D membrane preparations. We find that (i) the point-dipole distance between Y(Z)(*) and the Mn(4) cluster is 7.9 +/- 0.2 A, (ii) the angle between the interspin vector and the thylakoid membrane normal is 75 degrees, (iii) the g(z)()-axis of the Mn(4) cluster is 70 degrees away from the membrane normal and 35 degrees away from the interspin vector, and (iv) the exchange interaction between the two spins is -275 x 10(-)(4) cm(-)(1), which is antiferromagnetic. Due to the sensitivity of EPR line shapes of oriented spin-coupled pairs to the interspin distance, the present study imposes a tighter constraint on the Y(Z)-Mn(4) point-dipole distance than obtained from randomly oriented samples. The geometric constraints obtained from the 1-D oriented sample are combined with published models of the structure of Mn-depleted PS II to propose a location of the Mn(4) cluster. A structure in which Y(Z) is hydrogen bonded to a manganese-bound hydroxide ligand is consistent with available data and favors maximal orbital overlap between the two redox center that would facilitate direct electron- and proton-transfer steps.

Electron Spin Resonance Spectroscopy↗
PubMed1998

Characterization of the interaction between manganese and tyrosine Z in acetate-inhibited photosystem II.

When acetate-inhibited photosystem II (PSII) membranes are illuminated at temperatures above 250 K and quickly cooled to 77 K, a 240 G-wide electron paramagnetic resonance (EPR) signal is observed at 10 K. This EPR signal arises from a reciprocal interaction between the spin 1/2 ground state of the S2 state of the Mn4 cluster, for which a multiline EPR signal with shifted 55Mn hyperfine peaks is observed, and the oxidized tyrosine residue, YZ*, for which a broadened YZ* EPR spectrum is observed. The S2YZ* EPR signal in acetate-inhibited PSII is the first in which characteristic spectral features from both paramagnets can be observed. The observation of distinct EPR signals from each of the paramagnets together with the lack of a half-field EPR transition indicates that the exchange and dipolar couplings are weak. Below 20 K, the S2YZ* EPR signal in acetate-inhibited PSII is in the static limit. Above 20 K, the line width narrows dramatically as the broad low-temperature S2YZ* EPR signal is converted to a narrow YZ* EPR signal at room temperature. The line width narrowing is interpreted to be due to averaging of the exchange and dipolar interactions between YZ* and the S2 state of the Mn4 cluster by rapid spin-lattice relaxation of the Mn4 cluster as the temperature is increased. Decay of the S2YZ* intermediate at 200 K shows that the g = 4.1 form of the S2 state is formed and that a noninteracting S2-state multiline EPR signal is not observed as an intermediate in the decay. This result shows that a change in the redox state of YZ induces a spin-state change in the Mn4 cluster in acetate-inhibited PSII. The interconversion between spin states of the Mn4 cluster in acetate-inhibited PSII supports the idea that YZ oxidation or YZ* reduction is communicated to the Mn4 cluster through a direct hydrogen-bonding pathway, possibly involving a ligand bound to the Mn4 cluster.

Electron Spin Resonance Spectroscopy↗
PubMed1994

Solid state 13C and 15N NMR investigations of the N intermediate of bacteriorhodopsin.

Previous solid state 13C NMR studies of bacteriorhodopsin (bR) have inferred the C = N configuration and the protonation state of the retinal-lysine Schiff base (SB) linkage from the [13-13C]-retinal, [14-13C]retinal, and [epsilon-13C]lysine-216 chemical shifts in the bR555, bR568, and M412 states. Here we determine the C = N configuration and the protonation state of the N photointermediate that is cryotrapped along with the M photointermediate at high salt concentrations (0.1 M NaCl) and high pH (10.0). We obtained 13C and 15N SSN MR spectra of [epsilon-15N]lysine bR and [12-13C]- and [13-13C]retinal bR for samples illuminated under the above conditions. Two species are observed, both of which decay to bR568 upon warming. One species has chemical shifts identical to those obtained previously for M thermally trapped in guanidine.HCl at high pH (Smith et al., 1989a; Farrar et al., 1993). In the other species, the [epsilon-15N]lysine and 13-13C chemical shifts indicate that the SB is protonated, the 12-13C shift indicates a 13 = 14 cis configuration, and the previously published [14-13C]- and [epsilon-13C]lysine shifts indicate a C = N anti configuration. These results are consistent with other studies of the N photointermediate.

Bacteriorhodopsins↗
PubMed1993

Solid state NMR study of [epsilon-13C]Lys-bacteriorhodopsin: Schiff base photoisomerization.

Previous solid state 13C-NMR studies of bacteriorhodopsin (bR) have inferred the C = N configuration of the retinal-lysine Schiff base linkage from the [14-13C]retinal chemical shift (1-3). Here we verify the interpretation of the [14-13C]-retinal data using the [epsilon-13C]lysine 216 resonance. The epsilon-Lys-216 chemical shifts in bR555 (48 ppm) and bR568 (53 ppm) are consistent with a C = N isomerization from syn in bR555 to anti in bR568. The M photointermediate was trapped at pH 10.0 and low temperatures by illumination of samples containing either 0.5 M guanidine-HCl or 0.1 M NaCl. In both preparations, the [epsilon-13C]Lys-216 resonance of M is 6 ppm downfield from that of bR568. This shift is attributed to deprotonation of the Schiff base nitrogen and is consistent with the idea that the M intermediate contains a C = N anti chromophore. M is the only intermediate trapped in the presence of 0.5 M guanidine-HCl, whereas a second species, X, is trapped in the presence of 0.1 M NaCl. The [epsilon-13C]Lys-216 resonance of X is coincident with the signal for bR568, indicating that X is either C = N anti and protonated or C = N syn and deprotonated.

Bacteriorhodopsins↗