Biomedical subjects

Kazutoshi Fujikawa

Publications and source records attributed to Kazutoshi Fujikawa.

2 recordsLinked to original sources

PubMed2006

A gridified protein structure prediction system "Rokky-G" and its implementation issues.

In recent years, simulation using computer systems has been of increasing importance in the life sciences. We have developed a system called "Rokky-G" that facilitates a protein structure prediction strategy called "Rokky" on Grid systems. Rokky-G provides the framework of protein structure prediction on the Grid. In this paper we discuss the architecture of Rokky-G and implementation issues identified in order to obtain highly reliable results.

Algorithms↗

PubMed2005

Applying a grid technology to protein structure predictor "ROKKY".

This paper describes a sub-project of BioGrid project called "HTC (High Throughput Computing) group." Generally, a protein structure prediction which requires large amount of computational resources is done by trial-and-error method. HTC group have been developing a high throughput computing system with a flexible workflow handling mechanism for a protein structure prediction. In this paper, we show how to apply our high throughput computing system to the protein structure predictor called "ROKKY."

Computational Biology↗