Biomedical subjects

Kent R Mann

Publications and source records attributed to Kent R Mann.

18 recordsLinked to original sources

PubMed2006

Exploration of ground and excited electronic states of aromatic and quinoid S,S-dioxide terthiophenes. Complementary systems for enhanced electronic organic materials.

We analyze the electronic and molecular structures for the ground and excited electronic states of aromatic terthiophene (3T), the quinodimethane 3',4'-dibutyl-5,5' '-bis(dicyanomethylene)-5,5' '-dihydro-2,2':5',2' '-terthiophene (3Q), and isologues with the middle ring S-oxidized (3TO2, 3QO2). These represent extremes of electron rich and deficient ground states, often exhibiting complementary properties. Oxidizing the central sulfur atom affects the molecular structure, electron affinity, and photophysical properties of both pi systems. The consequences for 3T include de-aromatization of the central thiophene, red-shifting of the electronic absorption spectrum, and lowering of the reduction potential. The electron deficient quinoid 3QO2 shows an enhancement of electron affinity from reducing the electron-donor ability of sulfur, and a blue-shifting of its electronic absorption spectrum was seen. Fluorescence emission is quenched in the sulfonated terthiophene, and the contrary effect again would be expected upon sulfonation of a quinoid emitter. Raman vibrational spectroscopy, electrochemistry, and UV-vis and fluorescence spectroscopies are analyzed in conjunction with theoretical calculations.

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PubMed2006

N- and P-channel transport behavior in thin film transistors based on tricyanovinyl-capped oligothiophenes.

We report the structural and electrical characterization of thin films of organic semiconductor molecules consisting of an oligothiophene core capped with electron-withdrawing tricyanovinyl (TCV) groups. X-ray diffraction and atomic force microscopy of evaporated films of three different TCV-capped oligothiophenes showed that the films were highly crystalline. Electrical transport was measured in thin film transistors employing silver source and drain contacts and channel probes to correct for contact resistance. Three compounds exhibited n-channel (electron) conduction consistent with cyclic voltametry data that indicated they undergo facile reduction. Maximum electron mobilities were 0.02 cm2/V.s with an on/off current ratio of 10(6). A fourth end-capped molecule, TCV-6T-TCV, which had six thiophene rings, exhibited both p- and n-channel transport. Overall, these results confirm that substitution of oligothiophene cores with electron-withdrawing groups is a useful strategy to achieve electron-transporting materials.

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PubMed2006

Optical, redox, and NLO properties of tricyanovinyl oligothiophenes: comparisons between symmetric and asymmetric substitution patterns.

A series of tricyanovinyl (TCV)-substituted oligothiophenes was synthesized and investigated with a number of physical methods including UV/Vis, IR, and Raman spectroscopy, nonlinear optical (NLO) measurements, X-ray diffraction, and cyclic voltammetry. Mono- or disubstituted oligomers were prepared by the reaction of tetracyanoethylene with mono- or dilithiated oligomers. The comparative effects of the symmetric and asymmetric substitutions in the electronic and molecular properties have been addressed. These oligomers display dramatic reductions in both their optical and electrochemical band gaps in comparison with unsubstituted molecules. The analysis of the electronic properties of the molecules was assisted by density functional theory calculations, which are in excellent agreement with the experimental data. TCV substitution influences the energies of the frontier orbitals, especially with respect to the stabilization of LUMO orbitals. X-ray structural characterization of a monosubstituted oligomer exhibits pi-stacking with favorable intermolecular interactions. NLO results agree with the role of the intramolecular charge-transfer feature in the asymmetric samples. These results furthermore exalt the role of conformational flexibility in the disubstituted compounds and reveal an unexpected nonlinear optical activity for symmetric molecules. Regarding the electronic structure, the interpretation of the vibrational data reflects the balanced interplay between aromatic and quinoid forms, finely tuned by the chain length and substitution pattern. The electronic and structural properties are consistent with the semiconducting properties exhibited by these materials in thin film transistors (TFTs).

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PubMed2005

1,4-dimethyl-1,4-diazoniabicyclo[2.2.2]octane diiodide acetonitrile solvate.

In the crystal structure of the title compound, C(8)H(18)N(2)(2+).2I(-).CH(3)CN, the dication lies on a mirror plane containing the molecular dication threefold axis. The structure displays C-H...I interactions between H atoms of the 1,4-dimethyl-1,4-diazoniabicyclo[2.2.2]octane dication and the iodide anions. The H...I distances are in the range 2.96-3.18 (4) A. The dications pack forming channels along the b axis, which contain the iodide anions and acetonitrile solvent molecules.

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PubMed2004

Preparation and characterization of pi-stacking quinodimethane oligothiophenes. Predicting semiconductor behavior and bandwidths from crystal structures and molecular orbital calculations.

A series of new quinodimethane-substituted terthiophene and quaterthiophene oligomers has been investigated for comparison with a previously studied quinoid oligothiophene that has demonstrated high mobilities and ambipolar transport behavior in thin-film transistor devices. Each new quinoidal thiophene derivative shows a reversible one-electron oxidation between 0.85 and 1.32 V, a quasi-reversible one-electron second oxidation between 1.37 and 1.96 V, and a reversible two-electron reduction between -0.05 and -0.23 V. The solution UV-vis-NIR spectrum of each compound is dominated by an intense (epsilon congruent with 100 000 M(-1) cm(-1)) low energy pi-pi transition that has a lambda(max) ranging between 648 and 790 nm. All X-ray crystal structures exhibit very planar quinoidal backbones and short intermolecular pi-stacking distances (3.335-3.492 A). Structures exhibit a single pi-stacking distance with parallel cofacial stacking (sulfur atoms of equivalent rings pointed in the same direction) or with alternating distances and antiparallel cofacial stacking (sulfur atoms of equivalent rings pointed in the opposite direction). Examples of the layered and herringbone-packing motifs are observed for both the parallel and the antiparallel cofacial stacking. Analysis of the X-ray structures and molecular orbital calculations indicates that all of these compounds have one-dimensional electronic band structures as a result of the pi-stacking. For structures with a unique pi-stacking distance, a simple geometric overlap parameter calculated from the shape of the molecule and the slip from perfect registry in the pi-stack correlates well with the transfer integrals (t) calculated using molecular orbital theory. The calculated valence (633 meV) and conduction (834 meV) bandwidths for a quinoid quaterthiophene structure are similar to those calculated for the benchmark pentacene and indicate that both hole and electron mobilities could be significant.

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PubMed2004

Exploration of the electronic structure of dendrimerlike acetylene-bridged oligothiophenes by correlating Raman spectroscopy, electrochemistry, and theory.

A series of radial thiophene-based structures consisting of a central benzene or thiophene ring surrounded by acetylene-bridged terthienyl arms has been investigated by physical and theoretical methods. Fourier transform Raman spectroscopy of the neutral solids shows that the terthiophene arms are weakly coupled across the core (benzene plus acetylene groups) likely due to cross-conjugation or meta-conjugation effects that may prevent full delocalization. By increasing the number of arms around the central ring, the electronic structure of the molecules seems to be affected only at the core, whereas the outer terthiophene arms remain almost unaltered. Raman spectroelectrochemistry and quantum chemical calculations provide further insight into the charge delocalization of the oxidized species. There is no evidence to suggest that these oxidized forms, obtained upon electrochemical doping of the molecules, show charge delocalization across the core.

Acetylene↗

PubMed2004

p-Decylphenyl isocyanide and p-decylbenzonitrile: isomorphous isonitrile/nitrile isomers.

p-Decylphenyl isocyanide, p-C(10)H(21)-C(6)H(4)-NC or C(17)H(25)N, and p-decylbenzonitrile, p-C(10)H(21)-C(6)H(4)-CN or C(17)H(25)N, are isomorphous. The molecules lie in mirror planes, with the C(6) rings perpendicular to the mirror. The packing of both molecules includes an aliphatic region, with close to ideal packing of the C(10)H(21) chains, and an aromatic region, with phenyl ring-CN interactions. In addition, the CN ends of the molecules are also involved in a CN.NC dipolar interaction.

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PubMed2004

Spectroscopic and theoretical study of the molecular and electronic structures of a terthiophene-based quinodimethane.

The UV/Vis, infrared absorption, and Raman scattering spectra of 3',4'-dibutyl-5,5"-bis(dicyanomethylene)-5,5"-dihydro-2,2':5',2"-terthiophene have been analyzed with the aid of density functional theory calculations. The compound exhibits a quinoid structure in its ground electronic state and presents an intramolecular charge transfer from the terthiophene moiety to the C(CN)2 groups. The molecular system therefore consists of an electron-deficient terthiophene backbone end-capped with electron-rich C(CN)2 groups. The molecule is characterized by a strong absorption in the red, due to the HOMO-->LUMO pi-pi* electronic transition of the terthiophene backbone that shifts hypsochromically on passing from the solid state to solution and with the polarity of the solvent. The analysis of the vibrational spectra confirms the structural conclusions and supports the existence of an intramolecular charge transfer. Vibrational spectra in several solvents and as a function of temperature have also been studied. Significant frequency upshifts of the vibrations involved in the pi-electron-conjugated pathway have been noticed upon solution in polar solvents and with the lowering of the temperature. Finally, we propose a quinoid molecule as a reliable structural and electronic model for dication species in doped oligothiophenes or for bipolaron charged defects in doped polythiophene.

Crystallography, X-Ray↗

PubMed2004

Triethylammonium tetraphenylborate dichloromethane solvate.

The crystal structure of the title compound, C6H16N+.C24H20B-.CH2Cl2, displays an N-H...pi interaction between the triethylammonium cation and a phenyl ring of the tetraphenylborate anion. The distance between the ammonium H atom and the edge of this phenyl ring is 2.40 (3) A. The ammonium group and the aryl moiety are nearly perpendicular, forming an intramolecular dihedral angle of 90.4 degrees. A C-H...pi interaction between the disordered dichloromethane solvate molecule and a phenyl ring of the tetraphenylborate anion is also present.

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PubMed2003

Synthesis and characterization of tricyanovinyl-capped oligothiophenes as low-band-gap organic materials.

Tricyanovinyl-capped oligothiophenes of up to six rings have been synthesized and characterized. The substituted oligomers display dramatic reductions in both their optical and electrochemical band gaps in comparison to unsubstituted oligomers. The solvatochromic behavior of the terthiophene-substituted molecule was investigated in a variety of solvents. Stable oxidations and reductions were exhibited by the sexithiophene-substituted molecule on the CV time scale. [structure: see text]

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PubMed2003

Nitro-functionalized oligothiophenes as a novel type of electroactive molecular material: spectroscopic, electrochemical, and computational study.

A novel series of terthiophenes bearing electron-donor and electron-acceptor groups at the end alpha-positions has been prepared. The analysis of the UV-vis, infrared, and Raman spectra, performed with the aid of density functional theory calculations, shows that the asymmetrically substituted nitro compounds PhT(3)NO(2) and BrT(3)NO(2) behave as push-pull systems and present an intense photoinduced charge transfer in the visible spectrum. The symmetrically substituted dinitro compound NO(2)T(3)NO(2) displays a highly delocalized structure with a low single-double bond length alternation and also displays a low-energy absorption band in the visible region. The novel nitroterthiophenes possess attractive electrochemical properties since they generate stable species both upon oxidation and reduction. Oxidation mainly involves changes in the oligothiophene backbone and leads to the formation of stable cations even for NO(2)T(3)NO(2). Reduction is mainly nitro-centered but also affects the conjugated structure. Radical anions and dianions are formed for PhT(3)NO(2) and BrT(3)NO(2). Dianions, not radical anions, and trianions are obtained for NO(2)T(3)NO(2). Nitro-functionalized terthiophenes are shown to be very promising as electroactive molecular materials since they behave as push-pull systems, present a very intense photoinduced charge transfer in the visible region, and could act as both n- and p-channel conductors in organic electronic transistors.

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PubMed2002

Quinonoid oligothiophenes as electron-donor and electron-acceptor materials. A spectroelectrochemical and theoretical study.

Two quinonoid bis(dicyanomethylene) oligothiophenes, terthiophene and quaterthiophene analogues of TCNQ, have been investigated by spectroelectrochemical experiments and density functional theory calculations. Electrochemical data show that the molecules can be both reduced and oxidized at relatively low potentials, and that the quaterthiophene derivative forms four stable redox species, the dianion, neutral, cation radical, and dication. The neutral oligomers are characterized by a strong electronic absorption in the red or near-infrared region and can be viewed as structural and electronic analogues of aromatic oligothiophenes in the dication or bipolaron state. Upon reduction, dianions, not anion radicals, are formed which absorb in the visible region. The theoretical calculations show that the dianions have aromatic oligothiophene moieties with two anionic dicyanomethylene groups. The transition from a quinonoid to an aromatic structure is fully supported by UV-vis-near-IR and vibrational spectroscopic data. Oxidation, generating cation radicals and dications, occurs at rather low potentials similar to those reported for oligothiophenes. The electronic spectra of these cations are understood from the calculations, which suggest that the oxidized species are stabilized by the partial aromatization of the oligothiophene backbone. IR spectra of the species, especially the CN stretching frequencies, confirm the structural conclusions and allow comparison with TCNQ and the TCNQ dianion.

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PubMed2002

Synthesis and characterization of radial oligothiophenes: a new class of thiophene-based conjugated homologues.

[structure: see text] A series of thiophene-based homologues with an aromatic core surrounded by terthiophene "arms" with acetylene linkages has been synthesized by using Sonogashira coupling methods. The homologues were investigated spectroscopically in solution and in the solid state. They display extended pi-conjugation through the aromatic core that affects the strong emission and redox properties.

Journal Article↗

PubMed2002

Dinitro and quinodimethane derivatives of terthiophene that can be both oxidized and reduced. Crystal structures, spectra, and a method for analyzing quinoid contributions to structure.

Two new oligothiophenes, the dinitro compound 3',4'-dibutyl-5,5' '-dinitro-2,2':5',2' '-terthiophene (1) and the quinodimethane 3',4'-dibutyl-5,5' '-bis(dicyanomethylene)-5,5' '-dihydro-2,2':5',2' '-terthiophene (2), have been synthesized and studied with electrochemistry, UV-vis-NIR-IR spectroscopy, ESR, and X-ray crystallography. These compounds, designed to be both electron and hole carriers, show redox properties that are unusual for oligothiophenes. Cyclic voltammetry and spectroelectrochemistry demonstrated that each compound could be oxidized to a cation radical and reduced to an anion radical and dianion. The spectra of 2 and its three redox partners were analyzed in terms of a limiting structure in which the neutral 2 has orbitals corresponding to those of a substituted-terthiophene dication. Compound 1 crystallizes with the thiophene rings held in an unusual nonplanar, cisoid configuration in face-to-face pi-stacks, with a spacing between molecules of 3.65 A. The C-C bond lengths of the outer nitro-substituted rings have quinoid character. Compound 2 crystallizes with the thiophene rings in a planar, transoid configuration. The molecules are held in pi-stacks formed from pi-dimers with a spacing between molecules of 3.47 and 3.63 A. The C-C bond distances of the thiophene rings of 1 and 2 and other oligomers were analyzed by a principal component analysis. The analysis found that 93% of the structural variance resided in one principal component related to the quinoid structure of the oligothiophene moiety. The analysis reliably demonstrated a quinoid contribution to the structure of 1. This method should be applicable to understanding the structure of other conjugated molecules in which quinoid structures contribute.

Journal Article↗

PubMed2002

Ligand substitution, pH dependent deoxygenation, and linkage isomerization reactions of the 2,2'-bipyridinetetranitroruthenate dianion.

The reaction of the [Ru(bpy)(NO(2))(4)](2-) (bpy = 2,2'-bipyridine) ion in aqueous solutions produces two different nitrosyl complexes, depending on the pH of the solution. At acidic pH, complex cis,cis-Ru(bpy)(NO(2))(2)(ONO)(NO) was isolated. At neutral or basic pH, [Ru(bpy)(NO(2))(4)](2-) reacts to give cis,trans-Ru(bpy)(NO(2))(2)(NO)(OH). Both new complexes were fully characterized by elemental analysis and UV-vis, IR, (1)H NMR, and (15)N NMR spectroscopy. A single-crystal X-ray structure of cis,trans-Ru(bpy)(NO(2))(2)(NO)(OH) was also obtained. cis,cis-Ru(bpy)(NO(2))(2)(ONO)(NO) isomerizes in acetone or water solution to give a mixture of the trans,cis-Ru(bpy)(NO(2))(2)(ONO)(NO) and cis,cis-Ru(bpy)(ONO)(2)(NO(2))(NO) linkage isomers as determined by (1)H and (15)N NMR spectroscopy. A single-crystal X-ray structure of a solid solution of cis,cis-Ru(bpy)(ONO)(2)(NO(2))(NO)/trans,cis-Ru(bpy)(NO(2))(2)(ONO)(NO) was also obtained. This pair of isomers is the first crystallographically characterized compound with nitro, nitrito, and nitrosyl ligands. The kinetic studies of the Ru-NO(2) --> Ru-NO conversion reactions of [Ru(bpy)(NO(2))(4)](2)(-) in buffered solutions from pH 3 to pH 9 complement previous studies of the reverse reaction. The reactions are first order in [Ru(bpy)(NO(2))(4)](2-). At high pH, the reaction is independent of the concentration of H(+) while, at low pH, the reaction is first order in the concentration of H(+). The rate determining step of the high pH reaction involves breakage of the Ru-NO(2) bond while, at low pH, the mechanism involves a rapid reversible protonation of a NO(2) ligand followed by the rate determining loss of hydroxide to produce a nitrosyl ligand.

Journal Article↗

PubMed2002

Characterization of a cross-reactive electronic nose with vapoluminescent array elements.

A three-channel cross-reactive sensor array based on vapoluminescent platinum(II) double salt materials has been characterized. Two arrays were studied, one consisting of [Pt(CN-cyclododecyl)4][Pt(CN)4] (1), [(phen)Pt(CN-cyclohexyl)2][Pt(CN)4] (2), and [Pt(CN-n-tetradecyl)4][Pt-(CN)4] (3) materials, where phen = 1,10-phenanthroline, and a second array that has compound 3 replaced by the mixed double salt material [(phen)Pt(CN-cyclododecyl)Cl)]2[(phen)Pt(CN-cyclododecyl)2]2[Pt(CN)4]3 (4). Compounds 2, 3 and 4 are characterized here for the first time. Inclusion of solvent vapors into these materials often leads to dramatic shifts in their solid-state absorption and luminescence spectra. In these studies the arrays were exposed to a set of 10 test solvent vapors to determine the ability of each cross-reactive array to give reproducible vapoluminescent spectra characteristic of each solvent vapor. It was discovered that temperature programming between solvent vapor exposures greatly improved the reproducibility of the luminescence spectra obtained. A statistical analysis of three-dimensional resolution factors between pairs of solvent clusters in principal component space supported this assertion. The success of the temperature programming protocol was limited by the thermal stability and the sensitivity to low background water vapor levels of some platinum(II) double salt materials. The ability of the cross-reactive sensor array to differentiate between two different solvent vapors over a large concentration range was also investigated. Acetone and methanol were found to occupy two distinct regions of the three-dimensional principal component space. Detection limits for acetone and methanol were estimated from the principal component analysis as 75 and 6 g/m3, respectively.

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PubMed2002

A pi-stacking terthiophene-based quinodimethane is an n-channel conductor in a thin film transistor.

A terthiophene-based quinodimethane, 3',4'-dibutyl-5,5' '-bis(dicyanomethylene)-5,5' '-dihydro-2,2':5',2' '-terthiophene (1) was synthesized and crystallized. Compound 1 has a planar quinoid geometry that is stabilized by dicyanomethylene groups at each end of the molecule. In the crystal each molecule is part of a dimerized face-to-face pi-stack, with intermolecular spacings of 3.47 and 3.63 A, respectively. Cyclic voltammetry showed that 1 could be reversibly reduced and oxidized in methylene chloride solution. Thin film transistors (TFTs) were prepared by vacuum evaporation of 1 onto SiO2(300 nm)/Si substrates, followed by evaporation of Ag source and drain contacts. The doped Si substrate served as the gate electrode. X-ray diffraction and atomic force microscopy indicate the films are polycrystalline, with the long axes of the molecules approximately perpendicular to the substrate. The TFT measurements revealed n-channel conduction in films of 1, with room-temperature electron field effect mobilities as high as 0.005 cm2/Vs. The butyl side chains give 1 appreciable solubility in a range of common solvents, and preliminary TFT results on films cast from chlorobenzene show electron mobility as high as 0.002 cm2/Vs. These results indicate that pi-stacked quinoidal thiophene oligomers are a promising new class of soluble n-channel organic semiconductors.

Journal Article↗

PubMed2002

Synthesis and characterization of Pt(CN-p-(C(2)H(5))C(6)H(4))(2)(CN)(2), a crystalline vapoluminescent compound that detects vapor-phase aromatic hydrocarbons.

The vapochromic and vapoluminescent compound Pt(CN-p-(C(2)H(5))C(6)H(4))(2)(CN)(2) (abbreviated PtC(2)) is conveniently synthesized by the thermal rearrangement of [Pt(CN-p-(C(2)H(5))C(6)H(4))(4)][Pt(CN)(4)]. Recrystallization of PtC(2) gives a crystalline orange morph (O-PtC(2)) and an amorphous purple morph (P-PtC(2)) that both contain the cis isomer and differ only in their solid-state packing arrangements. Both compounds were fully characterized by elemental analysis, X-ray powder diffraction, NMR, IR, and TGA. O-PtC(2) is vapochromic and vapoluminescent: it reversibly sorbs aromatic hydrocarbons and ethanol from air or nitrogen with resulting color changes and shifts in the emission spectrum. The lambda(max) values (nm) for emission from O-PtC(2) x (guest) are as follows: no guest, 611; toluene, 565; benzene, 586; chlorobenzene, 592; p-xylene, 585; mesitylene, 565; ethanol, 587. In the case of toluene and mesitylene, intermediate emitting phases are observed. Recrystallization of O-PtC(2) from dichloromethane/toluene gave single crystals of PtC(2) x 0.5(toluene). The single-crystal X-ray structure of PtC(2) x 0.5(toluene) contains infinite stacks of cis geometry and planar molecules with chains of platinum atoms parallel to the c axis of the monoclinic unit cell. The average Pt-Pt separation in PtC(2) x 0.5(toluene) is c/4 = 3.288(2) A. There are solvent channels parallel with the c axis that contain the toluene molecule guests. Thin films of O-PtC(2) rapidly sorb toluene from the gas phase to form PtC(2) x 0.25(toluene) and PtC(2) x 0.5(toluene). Long-term exposure gives PtC(2) x 1.0(toluene). Removal of the toluene source causes rapid desorption to PtC(2) x 0.5(toluene) and then to PtC(2) x 0.25(toluene). The remaining 0.25(toluene) lattice guests require heating for rapid removal. X-ray powder diffraction identified the PtC(2),PtC(2) x .25(toluene), and PtC(2) x 0.5(toluene) phases and showed that the sorption of toluene is accompanied by small changes in the unit cell dimensions that include lengthening the Pt-Pt distances in the structure. The sorption process improves the packing in the structure by utilizing some of the free volume for the toluene lattice guests.

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