Biomedical subjects

Kim A Anderson

Publications and source records attributed to Kim A Anderson.

10 recordsLinked to original sources

PubMed2006

Stable isotope and trace element profiling combined with classification models to differentiate geographic growing origin for three fruits: effects of subregion and variety.

Classifications of geographic growing origin of three fresh fruits combining elemental profiles with various modeling approaches were determined. Elemental analysis (Ca, Cd, Cr, Cu, Fe, K, Mg, Mn, Na, Ni, P, V, and Zn) of strawberry, blueberry, and pear samples was performed using inductively coupled plasma argon atomic emission spectrometer. Bulk stable carbon and nitrogen isotope analyses in pear were performed using mass spectrometry as an alternative fingerprinting technique. Each fruit, strawberry (Fragaria x ananassa), blueberry (Vaccinium caesariense/corymbosum), and pear (Pyrus communis), was analyzed from two growing regions: Oregon vs Mexico, Chile, and Argentina, respectively. Principal component analysis and canonical discriminant analysis were used for data visualization. The data were modeled using linear discriminant function, quadratic discriminant function, neural network, genetic neural network, and hierarchical tree models with successful classification ranging from 70 to 100% depending on commodity and model. Effects of Oregon subregional and variety classification were investigated with similar success rates.

Argentina↗

PubMed2006

Effect of season and variety on the differentiation of geographic growing origin of pistachios by stable isotope profiling.

The objectives of this study were to demonstrate if seasonal or variety differences affected the feasibility of stable isotope profiling methods to differentiate the geographical growing regions of pistachios (Pistachia vera). Bulk carbon and nitrogen isotope analyses of approximately 150 pistachios samples were performed. Isotope ratios were determined using a stable isotope mass spectrometer. The pistachio samples analyzed were from the three major pistachio-growing regions: Turkey, Iran, and the United States (California). Geographic regions were well separated on the basis of isotope ratios. Seasonal effects were found to affect some isotopes for some regions. Pistachio varieties within specified geographic regions were not found to affect the discriminating power of stable isotopes, for the varieties tested. This paper reports the development of a simple chemical profiling method using bulk stable isotope ratios that may be widely applied to the determination of the geographic origin of foods.

Carbon Isotopes↗

PubMed2006

Selenium accumulation patterns in lotic and lentic aquatic systems.

Selenium (Se) concentrations in water column, sediment and insect compartments were measured over 3 years, in conjunction with selected physicochemical parameters, from lotic (flowing water) and lentic (standing water) sites within a single watershed in Utah, USA. There was evidence for steady-state concentrations of total [Se] in the insects, sediment and detritus, while there was no correlation between these concentrations and the concentration in surface water. Insect Se burden may therefore provide a more accurate measurement of food web accumulation risk than surface water Se concentration. The importance of organism-specific factors on Se transfer to higher trophic levels was revealed by the steady-state Se body burden within the same insect taxa occupying similar environmental compartments in both aquatic systems. Additionally, however, insect Se body burdens, even within similar taxa, were up to 7 times greater within the lentic compared with the lotic system, and site-specific biogeochemical processes are also likely to play a role in the pattern and level of Se accumulation between hydrogeochemically different aquatic systems occurring within the same watershed. Though a site-specific relationship was apparent between organic content and sediment and detritus Se concentrations, this factor did not account for insect Se accumulation differences between the lotic and lentic aquatic habitats. If carbon content is to be used as a site-specific predictor of Se accumulation potential, further investigations of it's influence on the food web accumulation rate of Se are required.

Animals↗

PubMed2005

Environmental stresses and skeletal deformities in fish from the Willamette River, Oregon.

The Willamette River, one of 14 American Heritage Rivers, flows through the most densely populated and agriculturally productive region of Oregon. Previous biological monitoring of the Willamette River detected elevated frequencies of skeletal deformities in fish from certain areas of the lower (Newberg pool [NP], rivermile [RM] 26 - 55) and middle (Wheatland Ferry [WF], RM 72 - 74) river, relative to those in the upper river (Corvallis [CV], RM 125-138). The objective of this study was to determine the likely cause of these skeletal deformities. In 2002 and 2003, deformity loads in Willamette River fishes were 2-3 times greater at the NP and WF locations than at the CV location. There were some differences in water quality parameters between the NP and CV sites, but they did not readily explain the difference in deformity loads. Concentrations of bioavailable metals were below detection limits (0.6 - 1 microg/ L). Concentrations of bioavailable polychlorinated biphenyls (PCBs) and chlorinated pesticides were generally below 0.25 ng/L. Concentrations of bioavailable polycyclic aromatic hydrocarbons were generally less than 5 ng/L. Concentrations of most persistent organic pollutants were below detection limits in ovary/oocyte tissue samples and sediments, and those that were detected were not significantly different among sites. Bioassay of Willamette River water extracts provided no evidence that unidentified compounds or the complex mixture of compounds present in the extracts could induce skeletal deformities in cyprinid fish. However, metacercariae of a digenean trematode were directly associated with a large percentage of deformities detected in two Willamette River fishes, and similar deformities were reproduced in laboratoryfathead minnows exposed to cercariae extracted from Willamette River snails. Thus, the weight of evidence suggests that parasitic infection, not chemical contaminants, was the primary cause of skeletal deformities observed in Willamette River fish.

Animals↗

PubMed2005

Use of chemical profiling to differentiate geographic growing origin of raw pistachios.

The objective of this study was to demonstrate the feasibility of chemical profiling methods combined with multivariate methods to differentiate the geographical growing regions of pistachios (Pistachia vera). Elemental analysis (Ba, Be, Ca, Cu, Cr, K, Mg, Mn, Na, V, Fe, Co, Ni, Cu, Zn, Sr, Ti, Cd, and P) of pistachios samples was performed using inductively coupled plasma atomic emission spectrometry. Analysis of inorganic anions and organic acids (selenite, bromate, fumarate, malate, selenate, pyruvate, acetate, phosphate, and ascorbate) of pistachio samples was performed using capillary electrophoresis. Bulk carbon and nitrogen isotope ratios were performed using stable isotope MS. There were nearly 400 pistachio samples analyzed from the three major pistachio growing regions: Turkey, Iran, and California (United States). A computational evaluation of the trace element data sets was carried out using statistical pattern recognition methods including principal component analysis, canonical discriminant analysis, discriminant analysis, and neural network modeling. Several linear discriminant function models classified the data sets with 95% or higher accuracy. We report the development of a method combining elemental analysis and classification techniques that may be widely applied to the determination of the geographical origin of foods.

Analysis of Variance↗

PubMed2002

Chemical marker for ALS-inhibitor herbicides: 2-aminobutyric acid proportional in sub-lethal applications.

A chemical profiling technique for sub-lethal acetolactate synthase (ALS)-inhibitor herbicides (e.g., sulfonylureas, imidazolines, triazolopyrimidine sulfonanilides, and pyrimidyloxy salicylic) was developed using 2-aminobutyric acid, and was found to be directly proportional to application rates in field studies on two varieties of potato plants. An uncomplicated, benign-by-design analytical method for the determination of 2-aminobutyric acid in plant tissue was developed. The method is simple, fast, and automated, entailing a water-trichloroacetic acid extraction followed by precolumn on-line derivatization using o-phthalaldehyde (OPA) solution and liquid chromatographic analyses. Use of reagents and chlorinated organic solvents, and generation of waste, are minimized as compared to other ALS-inhibitor herbicide analytical techniques. Recoveries for a series of fortified plant tissues ranged from 82 to 103%. Two 20-day field trials on two potato varieties, Russet Burbank and Shepody, were conducted during the 2000 and 2001 growing seasons. The study demonstrated that the 2-aminobutyric acid method is an excellent, selective chemical marker technique for ALS-inhibitor herbicides for real world plant matrixes.

Acetolactate Synthase↗

PubMed2002

Chemical profiling to differentiate geographic growing origins of coffee.

The objective of this research was to demonstrate the feasibility of this method to differentiate the geographical growing regions of coffee beans. Elemental analysis (K, Mg, Ca, Na, Al, V, Cr, Mn, Fe, Co, Ni, Cu, Zn, Mo, S, Cd, Pb, and P) of coffee bean samples was performed using ICPAES. There were 160 coffee samples analyzed from the three major coffee-growing regions: Indonesia, East Africa, and Central/South America. A computational evaluation of the data sets was carried out using statistical pattern recognition methods including principal component analysis, discriminant function analysis, and neural network modeling. This paper reports the development of a method combining elemental analysis and classification techniques that may be widely applied to the determination of the geographical origin of foods.

Africa, Eastern↗

PubMed2002

Trace element concentration in tree-rings biomonitoring centuries of environmental change.

Inductively coupled plasma mass spectrometry (ICP-MS) was used to examine trace element concentration in tree-rings over three and half centuries to assess macro-trends of environmental change. Tree-rings of a 350+ year old mammoth ponderosa pine (Pinus ponderosa) were analyzed for element concentration and evaluated versus local and global historical events. The ponderosa pine was located 100 miles south of the Canada/USA border and 180 miles east of the Pacific Ocean, and grew near apple orchards, a public road, and Swakane Creek in western Washington, USA. The elements tested did not all display the same time versus concentration patterns. Copper and chromium displayed cyclic concentration patterns over the last 350+ years, which appear to be associated with local events. Strontium, barium, zinc and cadmium were found to be relatively constant between the mid 1600s and the early 1800s. Strontium, barium, zinc, and cadmium then increased beginning in the early 1800s for approximately 50 years then decreased to present day 2000. Significantly, similar changes seen in Ca, Mg, and Zn in other studies have been attributed to acid rain, whereas, in our study area there is no history of anthropogenic acid rain. Most importantly, our data goes back to the mid-1600s several hundred years further back than most other studies of this nature. This additional time data provides for a better context of trend data not previously available.

Acid Rain↗

PubMedDate not supplied

Determination of pyrethrin and pyrethroid pesticides in urine and water matrixes by liquid chromatography with diode array detection.

The following pyrethrin and pyrethroid pesticides were determined in urine and water matrixes by liquid chromatography with diode array detection (LC-DAD): pyrethrin I, pyrethrin II, tetramethrin, baythroid, bifenthrin, fenvalerate, phenothrin, allethrin, resmethrin, cis-permethrin, and trans-permethrin. In addition, 3-phenoxybenzyl alcohol, a metabolite of various pyrethroids, was also successfully determined by the analytical method. The matrix extraction was simple, inexpensive, and fast, using only sodium chloride and acetonitrile. The acetonitrile extract was filtered and analyzed by LC-DAD. The method detection limits for the pyrethrin pesticides in 5 mL urine were determined to range from 0.002 to 0.04 microg/mL, depending on the individual pyrethrin. Recoveries from spiked tap water ranged from 77 to 96%; recoveries from urine ranged from 80 to 117%. This method is especially well-suited to clinical investigations, in which rapid analysis of forensic samples is often required.

Calibration↗

PubMedDate not supplied

Analytical method for dimethenamid-P in selected raw agricultural commodities by gas chromatography with electron capture detection.

A sensitive and simple method for the extraction and quantification of the herbicide dimethenamid-P from several raw agricultural commodities (RAC) is presented. The method provides sensitive and well-defined chromatography with baseline resolution in all matrixes tested. Homogenized samples were extracted with methanol-water, filtered, and then extracted with hexanes. A Florisil solid-phase extraction was then applied for the final cleanup. Sample separation and quantification were performed by gas chromatography with an electron capture detector. The instrument detection limit was 0.007 microg/mL, and the practical quantification limit was 0.003 microg/g (w/w) based on a 25 g sample. Recoveries for a series of fortified plant tissues ranged from 69 to 103%. The study demonstrated selective and sensitive recovery of dimethenamid-P from the RAC tested.

Acetanilides↗