Interleukin 12 gene polymorphisms enhance gastric cancer risk in H pylori infected individuals.
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Adenocarcinoma↗
Biomedical subjects
L Caenazzo
Publications and source records attributed to L Caenazzo.
Sex chromosome analysis in Turner Syndrome by a pentaplex PCR assay.
In this study, we describe a pentaplex PCR to determine the parental origin of the X chromosome and the presence of mosaicism, via amplification of four polymorphic markers located along the X chromosome (DXS10011, DXS6807, HUMARA, DXS101) and the X-Y amelogenin marker, in 41 families having a daughter with Turner Syndrome. Our results confirmed the cytogenetic findings and we found that the parental origin of the single X chromosome to be maternal in 84% of cases.
Adult↗
Y-chromosome haplotypes in Italy: the GEFI collaborative database.
A sample of 1176 males from 10 Italian regions have been typed for DYS19, DYS389-I, DYS389-II, DYS390, DYS391, DYS392, DYS393, and DYS385. Individual haplotype data are available on line. A low degree of variation is present among regions. Use of this database is specifically recommended for forensic applications in Italy.
Databases, Factual↗
Type distribution and allele frequencies of three serum proteins in the Asiago Plateau population (northern Italy).
Historical studies on the Asiago Plateau have pointed to the peculiarity of its inhabitants in terms of their socio-cultural development marked by long periods of linguistic and cultural isolation. The present research on some serum protein markers (TF, GC and HP) aims to establish whether this isolation may have caused this population to become different from the others in terms of gene frequencies. For this purpose, transferrin (TF), group-specific component (GC) and human haptoglobin (HP) polymorphisms were studied in 435 subjects. GC and HP were found to be within the range of variation known for the Italian Peninsula.
Alleles↗
The human endothelin-1 gene (EDN1) encoding a peptide with potent vasoactive properties maps distal to HLA on chromosome arm 6p in close linkage to D6S89.
We determined the precise genetic location of the human endothelin-1 gene (EDN1), which encodes a peptide with extremely potent vasoactive properties and is apparently involved in a spectrum of diseases ranging from hypertension to asthma. Analyzing the segregation of a four-allele EDN1 polymorphism in 40 CEPH families including 480 individuals, we detected significant linkage of EDN1 to DNA markers spanning the telomeric half of chromosome arm 6p. EDN1 was closest to the highly polymorphic nucleotide-repeat marker D6S89 at a theta = 0.06 with the highest pairwise LOD score Zmax = 31.2. Subsequent multipoint analysis placed EDN1 at 8 cM distal to D6S89; EDN1 was flanked at its telomeric site at a 13-cM distance by the gene encoding the A subunit of blood clotting factor XIII (F13A1). Furthermore, EDN1 was located at approximately 34-36 cM distal to the HLA region defined by HLA-A, -B, and -DRB1, and 31 cM proximal to the most telomeric marker D6S7. This location of EDN1 on the primary genetic map is strongly supported with odds of 2.7 x 10(12):1 against the next best alternative.
Blotting, Southern↗
HindIII identifies a two allele DNA polymorphism of the human cannabinoid receptor gene (CNR).
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Chromosomes, Human, Pair 6↗
TaqI identifies a four allele DNA polymorphism of the human endothelin-1 gene (EDN1).
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Alleles↗
Genetic and physical mapping of the human cannabinoid receptor gene to chromosome 6q14-q15.
A cDNA encoding a G protein-coupled receptor that appears to mediate the behavioral effects of cannabinoids, the psychoactive ingredients of marijuana, has recently been cloned from rat cerebral cortex and expressed. We have now determined the genomic location of the human cannabinoid receptor gene (CNR) by a combination of genetic linkage mapping and chromosomal in situ hybridization. The segregation pattern of a CNR DNA polymorphism was analyzed in 508 individuals from two or three generations of 40 families. Linkage of CNR to chromosome 6 centromeric loci and to DNA markers on the long and short arms was detected. CNR was tightly linked to D6S27, which is known to be located at 6q (log10 odds ratio [lod score, Zmax] of 10.54 at a recombination fraction [theta] of 0.02). Close linkage was suggested between CNR and CGA, the locus for the alpha subunit of human chorionic gonadotropin (Zmax = 2.71 at theta = 0). Moreover, CNR was linked to the two markers 308/BamHI (theta = 0.14) and 308/TaqI (theta = 0.20) defining locus D6Z1, an extended, highly repetitive, and highly conserved sequence localized exclusively to centromeres of all chromosomes and enriched on chromosome 6. In situ hybridization using a biotinylated cosmid probe localizes the gene to 6q14-q15, thereby confirming the linkage analysis and defining a precise alignment of the genetic and cytogenetic maps.
Cannabinoids↗
Genetic polymorphism of C3 in the Veneto population, Italy.
The distribution of C3 phenotypes in the population of Veneto was investigated by electrophoresis on agarose gel. In our sample (n = 810) the three common phenotypes C3 SS, C3 FF and C3 FS and a further phenotype, C3 S-VF, were observed. The following gene frequencies could be calculated: C3S = 0.8068, C3F = 0.1926 and C3V = 0.0006. These frequencies have been compared with those found in other populations. The analysis of 21 mother-child pairs was in agreement with an autosomal codominant inheritance.
Complement C3↗
Properdin factor B(Bf) polymorphism in the population of Veneto, Italy.
The distribution of Bf phenotypes in the population of Veneto was investigated by agarose gel electrophoresis and immunofixation. In our sample (n = 592), the seven common phenotypes F, S, F-S, S-S0.7, S-F1, F-S0.7, F-F1 were observed and the following gene frequencies calculated: Bf*S = 0.7399; Bf*F = 0.2280; Bf*F1 = 0.0177; Bf*S0.7 = 0.0144. These gene frequencies are compared to those found in other populations. Analysis of 21 mother-child pairs was in agreement with an autosomal codominant inheritance.
Complement Factor B↗
Genetic study of red cell esterase D polymorphism by ultrathin layer isoelectric focusing. Distribution in the Veneto population (Italy).
Human red cell Esterase D (EsD) was analyzed by isoelectric focusing (IEF) on ultrathin-layer polyacrylamide gel with a pH range of 5.0-6.0. Hemolysates were treated with Dithiothreitol to avoid loss of activity and change of the isozyme patterns by in vitro storage effects. In our sample of 951 unrelated persons from Veneto, seven different phenotypes were observed. The following allele frequencies were calculated: EsD1 = 0.8476, EsD2 = 0.1336, EsD5 = 0.0178, and EsDV = 0.0010.
Carboxylesterase↗
Genetic studies on the Asmat population (Irian-Jaya, Indonesia).
The Asmat are a population of about 35,000 people living on the South-West coast of Irian-Jaya (Indonesia; New Guinea). This paper presents the results of enzyme group and serum protein group typings in a sample of Asmats living in the coastal region around Agats. Red cell enzyme polymorphisms (EaP, PGM1, 6-PGD, EsD, ADA and AK) could be typed in 154 blood samples, serum protein polymorphisms (Ge, alpha 1-AT, PLG, Tf and Hp) in 160 blood samples. The results of this study are discussed in detail.
Blood Proteins↗
The polymorphism of plasminogen (PLG) by ultrathin-layer isoelectric focusing. Distribution in the Veneto population (Italy).
The distribution of plasminogen phenotypes in the population of Veneto was investigated by ultrathin-layer isoelectric focusing. In our sample (n = 1325), the three common phenotypes PLG1, PLG2, PLG2-1 and two further phenotypes PLG1-V and PLG2-V were, observed and the following frequencies calculated: PLG1 = 0.84038; PLG2 = 0.15811; PLGV = 0.00151. These gene frequencies are compared to those found in other populations. Analysis of 41 mother-child pairs was in agreement with an autosomal codominant inheritance.
Adult↗
Gc subtypes determined by ultrathin-layer isoelectric focusing. Distribution in the Veneto population (Italy).
The distribution of Gc phenotypes in the population of Veneto was investigated by ultrathin-layer isoelectric focusing. In our sample (n = 732) the six common phenotypes, Gc 1S, 1F, 1S1F, 2, 2-1S, 2-1F and a further phenotype, GC 1S1C3, were observed and the following frequencies calculated: Gc 1S = 0.560792; GC 1F = 0.159153; Gc2 = 0.277323; Gc 1C3 = 0.002732. Our gene frequencies have been compared with those found in other populations.
Gene Frequency↗
The PGM1 polymorphism as revealed by ultrathin-layer isoelectric focusing in the population of Padua.
The occurrence of PGM1 phenotypes in 589 samples from the population of Padua was investigated by ultrathin-layer isoelectric focusing. All ten phenotypes were observed. Frequencies of the PGM1 alleles (1+ = 0.6180; 1- = 0.1163; 2+ = 0.2122; 2- = 0.0535) have been compared to those found in other populations.
Erythrocytes↗
Problems in probability of paternity interpretation.
This paper discusses the statistical interpretation of blood group findings in paternity testing. As a consequence of the large number of systems now employed, high probabilities of paternity are usual and evaluation problems arise. The purpose of this investigation was to calculate the paternity probabilities for a sample of legitimate families with a true father compared with those obtained in some cases of non-excluded men chosen randomly from the population as the accused fathers for the same mother-child pairs. The calculations were based on Essen-Möller formula, derived from Bayes' Theorem. The blood group systems taken into account were ABO, Rh, MNSs, Kell-Cellano, P1, Duffy, Lutheran, Kidd, Gc, Hp, Gm, Km, Tf, alpha 1-AT, AcP, PGM1, AK, ADA, EsD, 6-PGDH and GLO-I. Applied together these give an exclusion probability of 97.32%. The results of probability of paternity for some mother-child-father triplets and its comparison with the chance of exclusion for the same mother-child pairs are reported.
Humans↗
Prenatal sexing and sex determination in infants with ambiguous genitalia by polymerase chain reaction.
Sex determination in both fetuses and infants with ambiguous external genitalia usually necessitates time-consuming and costly karyotyping. We propose a simple, rapid, and reliable method of prenatal and postnatal sex determination by means of the PCR, a technique currently used to identify gender for forensic purposes. DNA was extracted from 20 samples of whole blood from infants with ambiguous genitalia and from five samples of amniotic fluid. Three markers were amplified from each specimen: a Y chromosome alphoid repeat sequence and two homologous genes, amelogenin (AME) and zinc finger protein (ZFP). All three were detected in under 10 hr. A comparison of the results obtained with those of cytogenetic analysis of the same samples showed a perfect sex match, demonstrating that this PCR technique provides an accurate means of determining gender.
Amelogenin↗
The distribution of some polymorphisms in Italy.
A wide data collection on blood group gene frequencies in Italian regions and provinces is presented. This report is the result of a joint collaboration of human geneticists and forensic haematologists started in 1979 and updates a previous work by the same group. The following genetic polymorphisms have been examined: red-cell antigens (ABO, FY, Kell, Kidd, Lewis, Lutheran, MNSs, P, Rhesus), red-cell enzymes (ACP1, ADA, AK1, ESD, GLO1, GPT, PGD, PGM1), plasma proteins (BF, C3, GC, HP, IGK, PI, TF). Data have been classified according to genetic systems, Italian regions and provinces. Gene frequencies were estimated by the maximum likelihood method. The goodness of fit to Hardy-Weinberg proportions has been evaluated by the likelihood ratio statistics. Genetic heterogeneity of provinces and regions is reported.
Blood Group Antigens↗