Biomedical subjects

L Ramírez-Piscina

Publications and source records attributed to L Ramírez-Piscina.

14 recordsLinked to original sources

PubMed2005

Sharp-interface projection of a fluctuating phase-field model.

We present a derivation of the sharp-interface limit of a generic fluctuating phase-field model for solidification. As a main result, we obtain a sharp-interface projection which presents noise terms in both the diffusion equation and in the moving boundary conditions. The presented procedure does not rely on the fluctuation-dissipation theorem, and can therefore be applied to account for both internal and external fluctuations in either variational or nonvariational phase-field formulations. In particular, it can be used to introduce thermodynamical fluctuations in nonvariational formulations of the phase-field model, which permit to reach better computational efficiency and provide more flexibility for describing some features of specific physical situations. This opens the possibility of performing quantitative phase-field simulations in crystal growth while accounting for the proper fluctuations of the system.

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PubMed2004

Numerical study of the shape and integral parameters of a dendrite.

We present a numerical study of sidebranching of a solidifying dendrite by means of a phase-field model. Special attention is paid to the regions far from the tip of the dendrite, where linear theories are no longer valid. Two regions have been distinguished outside the linear region: a first one in which sidebranching is in a competition process and a second one further down where branches behave as independent of each other. The shape of the dendrite and integral parameters characterizing the whole dendrite (contour length and area of the dendrite) have been computed and related to the characteristic tip radius for both surface tension and kinetic dominated dendrites. Conclusions about the different behaviors observed and comparison with available experiments and theoretical predictions are presented.

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PubMed2002

Kinematic reduction of reaction-diffusion fronts with multiplicative noise: derivation of stochastic sharp-interface equations.

We study the dynamics of generic reaction-diffusion fronts, including pulses and chemical waves, in the presence of multiplicative noise. We discuss the connection between the reaction-diffusion Langevin-like field equations and the kinematic (eikonal) description in terms of a stochastic moving-boundary or sharp-interface approximation. We find that the effective noise is additive and we relate its strength to the noise parameters in the original field equations, to first order in noise strength, but including a partial resummation to all orders which captures the singular dependence on the microscopic cutoff associated with the spatial correlation of the noise. This dependence is essential for a quantitative and qualitative understanding of fluctuating fronts, affecting both scaling properties and nonuniversal quantities. Our results predict phenomena such as the shift of the transition point between the pushed and pulled regimes of front propagation, in terms of the noise parameters, and the corresponding transition to a non-Kardar-Parisi-Zhang universality class. We assess the quantitative validity of the results in several examples including equilibrium fluctuations and kinetic roughening. We also predict and observe a noise-induced pushed-pulled transition. The analytical predictions are successfully tested against rigorous results and show excellent agreement with numerical simulations of reaction-diffusion field equations with multiplicative noise.

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PubMed2001

Sidebranching induced by external noise in solutal dendritic growth.

We have studied sidebranching induced by fluctuations in dendritic growth. The amplitude of sidebranching induced by internal (equilibrium) concentration fluctuations in the case of solidification with solutal diffusion is computed. This amplitude turns out to be significantly smaller than values reported in previous experiments. The effects of other possible sources of fluctuations (of an external origin) are examined by introducing nonconserved noise in a phase-field model. This reproduces the characteristics of sidebranching found in experiments. Results also show that sidebranching induced by external noise is qualitatively similar to that of internal noise, and it is only distinguished by its amplitude.

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PubMed1999

Modeling of spatiotemporal patterns in bacterial colonies.

A diffusion-reaction model for the growth of bacterial colonies is presented. The often observed cooperative behavior developed by bacteria which increases their motility in adverse growth conditions is here introduced as a nonlinear diffusion term. The presence of this mechanism depends on a response which can present hysteresis. By changing only the concentrations of agar and initial nutrient, numerical integration of the proposed model reproduces the different patterns shown by Bacillus subtilis OG-01.

Agar↗

PubMed1999

Phase-field model for Hele-Shaw flows with arbitrary viscosity contrast. I. Theoretical approach.

We present a phase-field model for the dynamics of the interface between two inmiscible fluids with arbitrary viscosity contrast in a rectangular Hele-Shaw cell. With asymptotic matching techniques we check the model to yield the right Hele-Shaw equations in the sharp-interface limit, and compute the corrections to these equations to first order in the interface thickness. We also compute the effect of such corrections on the linear dispersion relation of the planar interface. We discuss in detail the conditions on the interface thickness to control the accuracy and convergence of the phase-field model to the limiting Hele-Shaw dynamics. In particular, the convergence appears to be slower for high viscosity contrasts.

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PubMed1999

Phase-field model for Hele-Shaw flows with arbitrary viscosity contrast. II. Numerical study.

We implement a phase-field simulation of the dynamics of two fluids with arbitrary viscosity contrast in a rectangular Hele-Shaw cell. We demonstrate the use of this technique in different situations including the linear regime, the stationary Saffman-Taylor fingers, and the multifinger competition dynamics, for different viscosity contrasts. The method is quantitatively tested against analytical predictions and other numerical results. A detailed analysis of convergence to the sharp interface limit is performed for the linear dispersion results. We show that the method may be a useful alternative to more traditional methods.

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PubMed1996