PubMed Health⌕ Search

Biomedical subjects

Leonid Khriachtchev

Publications and source records attributed to Leonid Khriachtchev.

At least 19 recordsLinked to original sources
PubMed2006

On theoretical predictions of noble-gas hydrides.

We discuss the present status and reliability of theoretical predictions of noble-gas hydride molecules. It is shown that the single-reference MP2 calculations can produce a rather inaccurate energy diagram for the formation of noble-gas hydrides, and this may mislead the theoretical predictions. We suggest that the computational dissociation energy of the HY precursors should always be compared with the experimental values as a checkpoint for the computational accuracy. The computational inaccuracy probably explains why some compounds that are stable with the single-reference MP2 method (HArC(4)H, HArC(3)N, and HArCN) did not appear in matrix-isolation experiments, whereas the corresponding compounds with Kr and Xe are known.

Journal Article↗
PubMed2006

Insertion of noble gas atoms into cyanoacetylene: an ab initio and matrix isolation study.

A computational and experimental matrix isolation study of insertion of noble gas atoms into cyanoacetylene (HCCCN) is presented. Twelve novel noble gas insertion compounds are found to be kinetically stable at the MP2 level of theory, including four molecules with argon. The first group of the computationally studied molecules belongs to noble gas hydrides (HNgCCCN and HNgCCNC), and we found their stability for Ng = Ar, Kr, and Xe. The HNgCCCN compounds with Kr and Xe have similar stability to that of previously reported HKrCN and HXeCN. The HArCCCN molecule seems to have a weaker H-Ar bond than in the previously identified HArF molecule. The HNgCCNC molecules are less stable than the HNgCCCN isomers for all noble gas atoms. The second group of the computational insertion compounds, HCCNgCN and HCCNgNC, are of a different type, and they also are kinetically stable for Ng = Ar, Kr, and Xe. Our photolysis and annealing experiments with low-temperature cyanoacetylene/Ng (Ng = Ar, Kr, and Xe) matrixes evidence the formation of two noble gas hydrides for Ng = Kr and Xe, with the strongest IR absorption bands at 1492.1 and 1624.5 cm(-1), and two additional absorption modes for each species are found. The computational spectra of HKrCCCN and HXeCCCN fit most closely the experimental data, which is the basis for our assignment. The obtained species absorb at quite similar frequencies as the known HKrCN and HXeCN molecules, which is in agreement with the theoretical predictions. No strong candidates for an Ar compound are observed in the IR absorption spectra. As an important side product of this work, the data obtained in long-term decay of KrHKr+ cations suggest a tentative assignment for the CCCN radical.

Journal Article↗
PubMed2006

UV photolysis products of propiolic acid in noble-gas solids.

Photolysis (193 nm) of propiolic acid (HCCCOOH) was studied with Fourier transform infrared spectroscopy in noble-gas (Ar, Kr, and Xe) solid matrixes. The photolysis products were assigned using ab initio quantum chemistry calculations. The novel higher-energy conformer of propiolic acid was efficiently formed upon UV irradiation, and it decayed back to the ground-state conformer on a time scale of approximately 10 min by tunneling of the hydrogen atom through the torsional energy barrier. In addition, the photolysis produced a number of matrix-isolated 1:1 molecular complexes such as HCCH...CO2, HCCOH...CO, and H2O...C3O. The HCCH...CO2 complex dominated among the photolysis products, and the computations suggested a parallel geometry of this complex characterized by an interaction energy of -9.6 kJ/mol. The HCCOH...CO complex also formed efficiently, but its concentration was strongly limited by its light-induced decomposition. In this complex, the most probable geometry was found to feature the interaction of carbon monoxide with the OH group via the carbon atom, and the computational interaction energy was determined to be -18.3 kJ/mol. The formation of the strong H2O...C3O complex (interaction energy -21 kJ/mol) was less efficient, which might be due to the inefficiency of the involved radical reaction.

Journal Article↗
PubMed2006

cis-trans formic acid dimer: experimental observation and improved stability against proton tunneling.

We prepared the first cis-trans dimer of formic acid and measured its vibrational spectrum in a low-temperature Ar matrix. This preparation was done by selective vibrational excitation of the trans-trans noncyclic dimer. It was found that the stability of the cis-trans dimer against proton tunneling is strongly improved compared to the monomer, especially at elevated temperatures (>30 K). This surprising phenomenon was explained by differences in dynamical, energetic, and vibrational properties of the dimer and monomer. The obtained results show that the proton tunneling reactions can be strongly modified in the hydrogen-bonded solid network compared to the monomeric species.

Journal Article↗
PubMed2006

HXeCCH in Ar and Kr matrices.

HXeCCH molecule is prepared in Ar and Kr matrices and characterized by IR absorption spectroscopy. The experiments show that HXeCCH can be made in another host than the polarizable Xe environment. The H-Xe stretching absorption of HXeCCH in Ar and Kr is blueshifted from the value measured in solid Xe. The maximum blueshifts are +44.9 and +32.3 cm(-1) in Ar and Kr, respectively, indicating stabilization of the H-Xe bond. HXeCCH has a doublet H-Xe stretching absorption measured in Xe, Kr, and Ar matrices with a splitting of 5.7, 13, and 14 cm(-1), respectively. Ab initio calculations for the 1:1 HXeCCHcdots, three dots, centeredNg complexes (Ng = Ar, Kr, or Xe) are used to analyze the interaction of the hosts with the embedded molecule. These calculations support the matrix-site model where the band splitting observed experimentally is caused by specific interactions of the HXeCCH molecule with noble-gas atoms in certain local morphologies. However, the 1:1 complexation is unable to explain the observed blueshifts of the H-Xe stretching band in Ar and Kr matrices compared to a Xe matrix. More sophisticated computational approach is needed to account in detail the effects of solid environment.

Journal Article↗
PubMed2006

Selective and reversible control of a chemical reaction with narrow-band infrared radiation: HXeCC radical in solid xenon.

The light-induced H + XeC2 <--> HXeCC reaction is studied in solid Xe, and the full optical control of this reaction is demonstrated. By narrow-band excitation in the IR spectral region, HXeCC radicals can be decomposed to a local metastable configuration and then selectively recovered by resonant excitation of the XeC2 vibrations. The novel recovery process is explained by short-range mobility of the reagents promoted by vibrational energy redistribution near the absorbing XeC2 molecule. This means that a chemical reaction can be selectively promoted in a desired place where the chosen absorber locates. The obtained results make a strong case of solid-state reactive vibrational excitation spectroscopy of weak radiationless transitions.

Absorption↗
PubMed2006

Protons solvated in noble-gas matrices: interaction with nitrogen.

The interaction of a (NgHNg)(+) cation (Ng = Ar and Kr) with a nitrogen molecule is studied. The structure, energetics, and vibrational properties of these complexed systems are computationally studied at the MP2/6-311++G(2d,2p) level of theory. The computations reveal two stable structures, linear and T-shaped configurations, with BSSE corrected interaction energies of the order of -1000 cm(-1). The (NgHNg)(+)[dot dot dot]N(2) complexes are characterized experimentally by IR absorption spectroscopy in solid Ar and Kr matrices. The spectra show that only one complex structure is present, as evidenced by the single nitrogen-induced nu(3) band. According to the computational results, the linear structure is more probable in the experiments. However, our results show that the one-to-one complex at the present computational level does not accurately agree with the matrix-isolation experiments, the differences originating possibly from the influence of the surrounding matrix. Based on the current data, the mechanism of cation decay in noble-gas matrices is discussed. The observed similar decay of (NgHNg)(+) and its N(2) complex indicates that the solvated proton is unable to tunnel and is therefore immobile in noble-gas matrices. The observations for the cation decay are consistent with the electron neutralization mechanism.

Journal Article↗
PubMed2005

Neutralization of solvated protons and formation of noble-gas hydride molecules: matrix-isolation indications of tunneling mechanisms?

The (NgHNg)+ cations (Ng = Ar and Kr) produced via the photolysis of HFAr, HFKr, and HBrKr solid mixtures are studied, with emphasis on their decay mechanisms. The present experiments provide a large variety of parameters connected to this decay phenomenon, which allows us to reconsider various models for the decay of the (NgHNg)+ cations in noble-gas matrices. As a result, we propose that this phenomenon could be explained by the neutralization of the solvated protons by electrons. The mechanism of this neutralization reaction probably involves tunneling of an electron from an electronegative fragment or another trap to the (NgHNg)+ cation. The proposed electron-tunneling mechanism should be considered as a possible alternative to the literature models based on tunneling-assisted or radiation-induced diffusion of protons in noble-gas solids. As a novel experimental observation of this work, the efficient formation of HArF molecules occurs at 8 K in a photolyzed HFAr matrix. It is probable that the low-temperature formation of HArF involves local tunneling of the H atom to the Ar-F center, which in turn supports the locality of HF photolysis in solid Ar. In this model, the decay of (ArHAr)+ ions and the formation of HArF molecules observed at low temperatures are generally unconnected processes; however, the decaying (ArHAr)+ ions may contribute to some extent to the formation of HArF molecules.

Journal Article↗
PubMed2005

Infrared absorption and electron paramagnetic resonance studies of vinyl radical in noble-gas matrices.

Vinyl radicals produced by annealing-induced reaction of mobilized hydrogen atoms with acetylene molecules in solid noble-gas matrices (Ar, Kr, and Xe) were characterized by Fourier transform infrared and electron paramagnetic resonance (EPR) spectroscopies. The hydrogen atoms were generated from acetylene by UV photolysis or fast electron irradiation. Two vibrational modes of the vinyl radical (nu7 and nu5) were assigned in IR absorption studies. The assignment is based on data for various isotopic substitutions (D and 13C) and confirmed by comparison with the EPR measurements and density-functional theory calculations. The data on the nu7 mode is in agreement with previous experimental and theoretical results whereas the nu5 frequency agrees well with the computational data but conflicts with the gas-phase IR emission results.

Journal Article↗
PubMed2005

Internal rotation in propionic acid: near-infrared-induced isomerization in solid argon.

The conformational system of propionic acid (CH3CH2COOH) is studied in solid argon. It is predicted by the ab initio calculations that this molecule has four stable conformers. These four structures are denoted Tt, Tg+/-, Ct, and Cg+/-, and they differ by the arrangement around the C-O and Calpha-C bonds. The ground-state Tt conformer is the only form present at 8 K after deposition of an argon matrix containing propionic acid. For the CH3CH2COOH and CH3CH2COOD isotopologues, narrow-band excitation of the first hydroxyl stretching overtone of the conformational ground state promotes the Calpha-C and C-O internal rotations producing the Tg+/- and Ct conformers, respectively. A subsequent vibrational excitation of the produced Tg+/- form induces its conversion to the Cg+/- conformer by rotation around the C-O bond. In the dark, all of the produced conformers decay to the conformational ground state at different rates. The decay kinetics and its temperature dependence allow the identification of the conformers by IR absorption spectroscopy, which is supported by ab initio calculations of their vibrational spectra. For the CH3CH2COOD isotopologue, the excitation of molecules isolated in different matrix sites results in site-dependent photoisomerization rates for the Calpha-C and C-O internal rotations, which also confirm the identification of the photoproducts.

Journal Article↗
PubMed2005

Infrared absorption spectrum of matrix-isolated noble-gas hydride molecules: fingerprints of specific interactions and hindered rotation.

Noble-gas hydride molecules with the general formula HNgY (Ng denotes noble-gas atom and Y denotes electronegative fragment) are usually prepared in solid noble gases. In many cases, the matrix-isolated HNgY molecules show a characteristic structure of the H-Ng stretching absorption: A close doublet as the main spectral feature and a weaker satellite at higher energy. This characteristic band structure is studied here for matrix-isolated HXeBr and HKrCl molecules. Based on the experimental and theoretical results, we suggest a model explaining the common features of the band structure of the HNgY molecules in noble-gas matrices. In this model, the main doublet bands are attributed to matrix sites where the splitting is caused by specific interactions of the embedded molecule with noble-gas matrix atoms in certain local morphology. The weaker blueshifted band is probably a fingerprint of hindered rotation (libration) of the embedded molecule in the lattice. This librational band has a mirror counterpart at lower energies appearing at higher matrix temperatures. Our present ab initio calculations for the one-to-one Xe...HXeBr complexes and the simulation of hindered rotation in a matrix support this image.

Journal Article↗
PubMed2004

Organo-noble-gas hydride compounds HKrCCH, HXeCCH, HXeCC, and HXeCCXeH: formation mechanisms and effect of 13C isotope substitution on the vibrational properties.

We investigate the formation mechanism of HXeCCXeH in a Xe matrix. Our experimental results show that the HXeCCXeH molecules are formed in the secondary reactions involving HXeCC radicals. The experimental data on the formation of HXeCCXeH is fully explained based on the model involving the HXeCC+Xe+H-->HXeCCXeH reaction. This reaction is the first case when a noble-gas hydride molecule is formed from another noble-gas molecule. In addition, we investigate the (12)C/(13)C isotope effect on the vibrational properties of organo-noble-gas hydrides (HKrCCH, HXeCCH, HXeCC, and HXeCCXeH) in noble-gas matrixes. The present experimental results and ab initio calculations on carbon isotope shifts of the vibrational modes support the previous assignments of these molecules. Upon (12)C to (13)C isotope substitution, we observed a pronounced effect on the H-Kr stretching mode of HKrCCH (downshift of 1.0-3.6 cm(-1), depending on the matrix site) and a small anomalous shift (+0.1 cm(-1)) of the H-Xe stretching mode of HXeCCH and HXeCCXeH.

Journal Article↗
PubMed2004

Formation of HXeO in a xenon matrix: indirect evidence of production, trapping, and mobility of XeO (1(1)Sigma+) in solid Xe.

IR spectroscopy, laser induced fluorescence (LIF), and thermoluminescence (TL) measurements have been combined to monitor trapping, thermal mobility, and reactions of oxygen atoms in solid xenon. HXeO and O(3) have been used as IR active species that probe the reactions of oxygen atoms. N(2)O and H(2)O have been used as precursors for oxygen atoms by photolysis at 193 nm. Upon annealing of matrices after photolysis, ozone forms at two different temperatures: at 18-24 K from close O ...O(2) pairs and at approximately 27 K due to global mobility of oxygen atoms. HXeO forms at approximately 30 K reliably at higher temperature than ozone. Both LIF and TL show activation of oxygen atoms around 30 K. Irradiation at 240 nm after the photolysis at 193 nm depletes the oxygen atom emission at 750 nm and reduces the amount of HXeO generated in subsequent annealing. Part of the 750 nm emission can be regenerated by 266 nm and this process increases the yield of HXeO in annealing as well. Thus, we connect oxygen atoms emitting at 750 nm with annealing-induced formation of HXeO radicals. Ab initio calculations at the CCSD(T)/cc-pV5Z level show that XeO (1(1)Sigma(+)) is much more deeply bound [D(e) = 1.62 eV for XeO --> Xe+O((1)D)] than previous calculations have predicted. Taking into account the interactions with the medium in an approximate way, it is estimated that XeO (1(1)Sigma(+)) has a similar energy in solid xenon as compared with interstitially trapped O((3)P) suggesting that both possibly coexist in a low temperature solid. Taking into account the computational results and the behavior of HXeO and O(3) in annealing and irradiations, it is suggested that HXeO may be formed from singlet oxygen atoms which are trapped in a solid as XeO (1(1)Sigma(+)).

Journal Article↗
PubMed2004

Formation of HArF in solid Ar revisited: are mobile vacancies involved in the matrix-site conversion at 30 K?

The HArF molecule can occupy in solid Ar thermally unstable and stable configurations, and their microscopic structure is not understood at the moment. We present additional experimental results on the formation of two HArF configurations and analyze them with emphasis on possible reactions of the unstable configuration with matrix vacancies to form the stable configuration. We conclude that the existing computational scenarios do not describe fully the present experimental data. In order to explain qualitatively the experimental results, two tentative models are discussed. The first model is based on local mobility of matrix vacancies produced during photolysis and the second model considers isomerization of the HArF at Arn supermolecule. More importantly, the present results constitute the experimental basis for future theoretical studies.

Journal Article↗
PubMed2003

Chemical compounds formed from diacetylene and rare-gas atoms: HKrC4H and HXeC4H.

New organic rare-gas compounds, HRgC4H (Rg = Kr or Xe), are identified in matrix-isolation experiments supported by ab initio calculations. These compounds are the largest molecules among the known rare-gas hydrides. They are prepared in low-temperature rare-gas matrixes via UV photolysis of diacetylene and subsequent thermal mobilization of H atoms at approximately 30 and 45 K for Kr and Xe, respectively. The strongest IR absorption bands of the HRgC4H molecules are the H-Rg stretches with the most intense components at 1290 cm(-1) for HKrC4H and at 1532 cm(-1) for HXeC4H, and a number of weaker absorptions (C-H stretching, C-C-C bending, and C-C-H bending modes) are also found in agreement with the theoretical predictions. As probably the most important result, the IR absorption spectra indicate some further stabilization of the HRgC4H molecules as compared with the corresponding HRgC2H species identified recently (Khriachtchev et al. J. Am. Chem. Soc. 2003, 125, 4696 and Khriachtchev et al. J. Am. Chem. Soc. 2003, 125, 6876). The computational energetic results support this trend. HXeC4H is predicted to be 2.5 eV lower in energy than H + Xe + C4H, which is approximately 1 eV larger than the corresponding value for HXeC2H. We expect that the larger molecules HRgC6H and HRgC8H are even more stable and the HRgC2nH species are good candidates for bulk organic rare-gas material.

Journal Article↗
PubMed2003

A gate to organokrypton chemistry: HKrCCH.

An organic molecule containing krypton, HKrCCH, is reported. The preparation of HKrCCH includes 193-nm photolysis of H2C2/Kr solid mixtures at 8 K and subsequent thermal mobilization of hydrogen atoms at >/=30 K. The identification is based on infrared absorption spectroscopy and supported by ab initio calculations which show ionic and covalent contributions to the bonding. We believe that a series of similar organokrypton molecules can be prepared as computationally demonstrated for HKrC4H and HKrC3H3. These results feature a generally novel way for activating chemically the H-CC- group, which can find practical applications of the krypton catalysis.

Journal Article↗
PubMed2003

Fluorine-free organoxenon chemistry: HXeCCH, HXeCC, and HXeCCXeH.

Three novel Xe-containing organic compounds, HXeCCH, HXeCC (open-shell species), and HXeCCXeH, are identified using infrared absorption spectroscopy. They are prepared in a low-temperature Xe matrix using UV photolysis of acetylene and subsequent annealing at 40-45 K. The experimental observations are supported by extensive ab initio calculations. This work demonstrates a new way to activate the H-Ctbd1;C- group without use of XeF(2), which can extend the range of organoxenon compounds.

Journal Article↗