PubMed Health⌕ Search

Biomedical subjects

M D Porter

Publications and source records attributed to M D Porter.

At least 19 recordsLinked to original sources
PubMed2006

Detection of viruses: atomic force microscopy and surface enhanced Raman spectroscopy.

This paper demonstrates the capability of atomic force microscopy (AFM) and surface enhanced Raman spectroscopy (SERS) to function effectively as ultra-sensitive readout tools for chip-scale platforms designed for pathogen detection in complex biological media. AFM allows direct (i.e., label-free) visualization and quantification of nanometer-sized viruses captured on a smooth, selective surface. AFM readout led to optimization of a capture substrate for feline calicivirus (FCV), and yielded a limit of detection of 3 x 10(6) FCV/mL. SERS-based detection of FCV, carried out in a sandwich-type assay, requires labelling of the substrate-bound FCV with a selective extrinsic Raman label (ERL). These studies yielded a limit of detection of 1 x 10(6) FCV/mL. The prospects of these two readout methods as additions to the arsenal of tools in bioterrorism prevention are briefly discussed.

Calicivirus, Feline↗
PubMed2002

Effects of feed enzymes on nutritive value of soyabean meal fed to broilers.

1. The effects of two enzyme products on the nutritive value of soyabean meal (SBM) were investigated with the emphasis on changes in composition of non-starch polysaccharides (NSP) along the digestive tract. Enzyme A was a commercially available product containing mainly hemicellulase, pectinase, beta-glucanase and some protease activities and Enzyme B was an experimental product with mainly beta-galactanase activity. 2. Enzymes were added at the recommended dosage (normal) and at 5 times the recommended dosage (high) to a semi-purified diet based on maize with SBM as the sole protein source. 3. The enzymes had no effect on digesta viscosity in the jejunum or ileum. 4. Enzyme A at the high dosage significantly (P<0.05) improved AMEN, reduced excreta moisture content and improved ileal protein digestibility. The addition of the same enzyme at the recommended dosage had no effect on any of the above parameters. 5. Analysis of the monosaccharide composition revealed that Enzyme A tended to reduce the amounts of rhamnose and galactose in the soluble and insoluble NSP fractions in thejejunal and ileal digesta. The reduction was significant (P<0.05) when the same enzyme was added at the high dosage. 6. Enzyme B significantly (P<0.05) improved AMEN of the diet but not the growth or the feed conversion ratio (FCR) of the birds. Enzyme B at the high dosage significantly reduced (P<0.05) ileal protein digestibility. 7. Enzyme B significantly (P<0.05) increased the amount of free sugars in thejejunum and reduced (P<0.05) the concentration of soluble NSP in the ileum. 8. Analysis of the monosaccharide composition in the jejunal and ileal digesta showed that this enzyme was highly effective in releasing galactose from both the soluble and insoluble NSP fractions. 9. It is concluded that glycanases with galactanase and pectinase activities supplemented at appropriate dosages can improve the digestibility of the NSP in SBM and increase the metabolisable energy content of the diet containing high levels of SBM. 10. Furthermore, the addition of Enzyme B at the high dosage significantly (P<0.05) reduced protein digestibility without any measurable reduction in growth performance.

Animal Feed↗
PubMed2001

Chemical modification of carbonaceous stationary phases by the reduction of diazonium salts.

This paper describes a new strategy for the creation of chemically modified carbonaceous stationary phases. The strategy exploits the electroreduction of arenediazonium salts as a means for functionalizing the surface of glassy carbon (GC) and porous graphitic carbon (PGC) stationary phases. The one-electron reduction of these salts forms an arene radical which then couples via a carbon-carbon linkage to the carbon framework at the surface of the stationary phase. Two arenediazonium-based modifiers were used in evaluating the potential utility of this strategy: 4-nitrobenzenediazonium tetrafluoroborate for the GC and PGC phases and 4-hexylbenzenediazonium tetrafluoroborate for only the PGC phases. Modifications were carried out by packing the phases into a column used for electrochemically modulated liquid chromatography. The effectiveness of the modifications was assessed by X-ray photoelectron spectroscopy and by comparing the liquid separation of a series of mixtures before and after coating deposition. For the nitrobenzyl-modified GC phase, the test mixture contained both anisole and fluoranthene. The performance of the nitrobenzyl- and hexylbenzyl-modified PGC stationary phases was characterized by the separations of substituted phenols (i.e., nitrophenol and resorcinol) and a few important pharmaceutical agents (i.e., hexobarbital, oxazepam, and nitrazepam). The potential utility of this modification procedure to form stationary phases that are stable upon extended exposure to aggressive mobile phases is discussed and briefly examined.

Carbon↗
PubMed2001

Electrochemically actuated mercury pump for fluid flow and delivery.

This paper describes the development of a prototype pumping system with the potential for incorporation into miniaturized, fluid-based analytical instruments. The approach exploits the well-established electrocapillarity phenomena at a mercury/electrolyte interface as the mechanism for pump actuation. That is, electrochemically induced changes in the surface tension of mercury result in the pistonlike movement of a mercury column confined within a capillary. We present herein theoretical and experimental assessments of pump performance. The design and construction of the pump are detailed, and the potential attributes of this design, including the generated pumping pressure, flow rate, and power consumption, are discussed. The possible miniaturization of the pump for use as a field-deployable, fluid-delivery device is also briefly examined.

Electrochemistry↗
PubMed2000

Graphite microparticles as coatings for quartz crystal microbalance-based gas sensors.

The use of graphite particles (1-2 microm) as coatings on quartz crystal microbalances (QCMs) for detection and monitoring of toluene and other volatile organic compounds (VOCs) is described. Unlike the more commonly used polymeric coatings with low glass transition temperatures (Tg), particulate graphitic coatings are not as susceptible to loss of acoustic energy when coating thickness or operational temperature increases. This situation enables the use of relatively thick coatings, which increases the absolute amount of vapor sorbed in the coating and, consequently, lowers the level of detection and enhances operation over a wide temperature range. The use of small size particles also results in a coating with a more porous structure, which facilitates uptake and release of VOCs in comparison to coatings made from high Tg polymers, which have a lower porosity. These attributes, coupled with the inherent stability of graphitic materials, make particulate graphite coatings especially suitable for applications at high temperatures. The advantages of using particulate graphite as a coating on QCMs are demonstrated by comparison to the performance of a few low-Tg polymers [i.e., poly(isobutylene) and poly(diphenoxyphosphazene)] and high-Tg polymers (i.e., polystyrene).

Crystallization↗
PubMed2000

Monoclonal antibody--gold biosensor chips for detection of depurinating carcinogen--DNA adducts by fluorescence line-narrowing spectroscopy.

A new direct readout methodology for detection and quantitation of fluorescent carcinogen-DNA adducts is described. It combines the binding specificity of an immobilized monoclonal antibody (MAb) with high-resolution, low-temperature fluorescence spectroscopy. The MAb, which is covalently bound to a gold surface via a chemisorbed disulfide coupling agent, binds the adduct of interest in an aqueous sample. Laser-induced fluorescence under nonline narrowing (FNLN) and line-narrowing (FLN) conditions was used to detect (benzo[a]pyren-6-yl)guanine (BP-6-N7Gua) bound to immobilized MAb. At room temperature, the BP-6-N7Gua fluorescence was not detected, most likely because of quenching by the gold surface and/or efficient dynamical quenching. However, fluorescence was observed at room temperature when the surface was covered with a thin layer of glycerol, and possible reasons for the fluorescence enhancement are considered. Lowering of the temperature to 77 K led to nearly an order of magnitude increase in fluorescence intensity. Highly structured FLN spectra obtained at 4.2 K allowed for definitive adduct identification. The potential of this methodology for risk assessments of individuals exposed to polycyclic aromatic hydrocarbons is discussed.

Antibodies, Monoclonal↗
PubMed2000

Electrochemically modulated liquid chromatography coupled on-line with electrospray mass spectrometry.

Electrochemically modulated liquid chromatography (EMLC) has been coupled to an electrospray mass spectrometer. This combination takes advantage of the ability of EMLC to manipulate retention and enhance separation efficiency solely through changes in the potential applied to a conductive stationary phase, thereby minimizing complications because of possible changes in analyte ionization efficiencies when gradient elution techniques are used. Three examples are presented that demonstrate the attributes of this EMLC/electrospray mass spectrometry (ES-MS) coupling. The first two examples involve the separation of mixtures of corticosteroids or of benzodiazepines, showing the general utility of the union for eluent identification and low-level detection. The ability to identify products from on-column redox transformations is also demonstrated using the benzodiazepine mixture. The third example investigates the electrooxidation of aniline by utilizing an EMLC column as an on-line electrochemical reactor and product separator and ES-MS for detection and product identification.

Adrenal Cortex Hormones↗
PubMed2000

Ultrasound-guided Kopans' needle location and removal of a retained foreign body.

Penetrating injury with retained foreign body is a common problem. Location of the foreign body and surgical excision may be difficult. Ultrasound can be a sensitive and cost-effective tool in both the detection and surgical removal of retained foreign bodies in soft tissue. We report a case in which ultrasound-guided needle localization was used for removal of a wooden foreign body

Dermatologic Surgical Procedures↗
PubMed2000

Kinetic mechanism of the p38-alpha MAP kinase: phosphoryl transfer to synthetic peptides.

p38 is a member of the mitogen-activated protein (MAP) kinase family. Activation (phosphorylation) of p38 acts as a switch for the transcriptional and translational regulation of a number of proteins, including the proinflammatory cytokines. Investigation of a set of small peptides revealed that, as with protein substrates, p38-alpha behaves as a proline-directed Ser/Thr MAP kinase for a peptide substrate, peptide 4 (IPTSPITTTYFFFKKK). We investigated the steady-state kinetic mechanism of the p38-alpha-catalyzed kinase reaction with EGF receptor peptide, peptide 1, as a substrate. Lineweaver-Burk analysis of the substrate kinetics yielded a family of lines intersecting to the left of the ordinate, with either ATP or peptide 1 as the varied substrate. Kinetic analysis in the presence of ADP yielded a competitive inhibition pattern when ATP was the varied substrate and a noncompetitive pattern if peptide 1 was the varied substrate. At saturating peptide substrate concentrations, inhibition by phosphopeptide product yielded an uncompetitive pattern when ATP was the varied substrate. These data are consistent with ordered binding with ATP as the initial substrate. We provide further evidence of the existence of a productive p38.ATP binary complex in that (a) activated p38-alpha has intrinsic ATPase activity, (b) ATPase and kinase activities are coupled, and (c) inhibitors of ATPase activity also inhibit the kinase activity with a similar inhibition constant. The k(cat) for the kinase reaction was lowered by 1.8-fold when ATP-gamma-S was used. Microviscosity linearly affected the k(cat) values of both the ATP and ATP-gamma-S reactions with a slope of about 0.8. These observations were interpreted to mean that the phosphoryl transfer step is not rate-limiting and that the release of product and/or enzyme isomerization is a possible rate-limiting step(s).

Adenosine Triphosphatases↗
PubMed2000

Immunosensing platforms using spontaneously adsorbed antibody fragments on gold.

This paper describes the construction and characterization of miniaturized antigenic immunosurfaces composed of spontaneously adsorbed Fab'-SH fragments on gold. Rabbit Fab'-SH fragments contain a free sulfhydryl group that forms a thiolate bond with a gold substrate as detailed by X-ray photoelectron spectroscopy. This approach creates surfaces of higher epitope density, a factor critical to the early detection of disease, than surfaces composed of adsorbed whole molecule IgG on gold. The viability and specificity of antigenic Fab'-SH immunosurfaces is demonstrated using atomic force microscopy and confocal fluorescence microscopy, and possible explanations for the larger epitope density are discussed.

Adsorption↗
PubMed2000

The effects of enzyme addition to broiler diets containing high concentrations of canola or sunflower meal.

The effects of two commercial enzyme products on the nutritive value of canola meal (CM) and sunflower meal (SFM) were determined in a classical AME bioassay with special emphasis on the utilization of nonstarch polysaccharides (NSP). The enzymes were added to semi-purified broiler grower diets based on corn and casein containing 35% CM or 35% SFM, respectively. Feed intake, growth, and AME of the diets were significantly (P < 0.001) affected by type of oilseed meal included in the diet. Birds fed the SFM-based diets had a significantly (P < 0.001) higher growth rate and AME and a lower feed conversion ratio (FCR) than did birds fed the CM-based diets. The addition of enzymes to either CM- or SFM-based diets had no significant effects on growth performance and AME; however, the addition of enzymes to CM-based diets resulted in a significant reduction in the concentration of soluble NSP in the jejunum (Enzyme A) or a significant reduction of total NSP in the jejunum (Enzyme B). The AMEn was significantly lower in diets containing CM supplemented with Enzyme B. The addition of enzymes to SFM-based diets significantly improved NSP digestion in the jejunum and protein digestion in the ileum. The results of this study indicate that commercial enzyme products had some effects in diets containing high concentrations of CM or SFM. However, these effects could only be seen after detailed analyses of feed and digesta and did not result in significant improvement in growth performance of broilers.

Animal Nutritional Physiological Phenomena↗
PubMed1999

Immunoassay readout method using extrinsic Raman labels adsorbed on immunogold colloids.

An immunoassay readout method based on surface-enhanced Raman scattering (SERS) is described. The method exploits the SERS-derived signal from reporter molecules that are coimmobilized with biospecific species on gold colloids. This concept is demonstrated in a dualanalyte sandwich assay, in which two different antibodies covalently bound to a solid substrate specifically capture two different antigens from an aqueous sample. The captured antigens in turn bind selectively to their corresponding detection antibodies. The detection antibodies are conjugated with gold colloids that are labeled with different Raman reporter molecules, which serve as extrinsic labels for each type of antibody. The presence of a specific antigen is established by the characteristic SERS spectrum of the reporter molecule. A near-infrared diode laser was used to excite efficiently the SERS signal while minimizing fluorescence interference. We show that, by using different labels with little spectral overlap, two different antigenic species can be detected simultaneously. The potential of this concept to function as a readout strategy for multiple analytes is briefly discussed.

Adsorption↗
PubMed1998

Design and synthesis of novel conformationally restricted HIV protease inhibitors.

A set of HIV protease inhibitors represented by compound 2 has previously been described. Structural and conformational analysis of this compound suggested that conformational restriction of the P1/P2 portion of the molecule could lead to a novel set of potent protease inhibitors. Thus, probe compounds 3-7 were designed, synthesized, and found to be potent inhibitors of HIV protease.

Anti-HIV Agents↗
PubMed1998

Microminiaturized immunoassays using atomic force microscopy and compositionally patterned antigen arrays.

This paper combines the topographic imaging capability of the atomic force microscope (AFM) with a compositionally patterned array of immobilized antigenic rabbit IgG on gold as an approach to performing immunoassays. The substrates are composed of micrometer-sized domains of IgG that are covalently linked to a photolithographically patterned array of a monolayer-based coupling agent. The immobilized coupling agent, which is prepared by the chemisorption of dithiobis(succinimidyl undecanoate) on gold, is separated by micrometer-sized grids of a monolayer formed from octadecanethiol (ODT). The strong hydrophobicity of the ODT adlayer, combined with the addition of the surfactant Tween 80 to the buffer solution that is used in forming the antibody-antigen pairs, minimizes the nonspecific adsorption of proteinaceous materials to the grid regions. This minimization allows the grids to function as a reference plane for the AFM detection of the height increase when a complementary antibody-antigen pair is formed. The advantageous features of this strategy, which include ease of sample preparation, an internal reference plane for the detection of topographic changes, and the potential for regeneration and reuse, are demonstrated using rabbit IgG as an immobilized antigen and goat anti-rabbit IgG as the complementary antibody. The prospects for further miniaturization are discussed.

Animals↗