PubMed Health⌕ Search

Biomedical subjects

M W Vannier

Publications and source records attributed to M W Vannier.

At least 19 recordsLinked to original sources
PubMed2004

ImageParser: a tool for finite element generation from three-dimensional medical images.

BACKGROUND: The finite element method (FEM) is a powerful mathematical tool to simulate and visualize the mechanical deformation of tissues and organs during medical examinations or interventions. It is yet a challenge to build up an FEM mesh directly from a volumetric image partially because the regions (or structures) of interest (ROIs) may be irregular and fuzzy. METHODS: A software package, ImageParser, is developed to generate an FEM mesh from 3-D tomographic medical images. This software uses a semi-automatic method to detect ROIs from the context of image including neighboring tissues and organs, completes segmentation of different tissues, and meshes the organ into elements. RESULTS: The ImageParser is shown to build up an FEM model for simulating the mechanical responses of the breast based on 3-D CT images. The breast is compressed by two plate paddles under an overall displacement as large as 20% of the initial distance between the paddles. The strain and tangential Young's modulus distributions are specified for the biomechanical analysis of breast tissues. CONCLUSION: The ImageParser can successfully exact the geometry of ROIs from a complex medical image and generate the FEM mesh with customer-defined segmentation information.

Computer Graphics↗
PubMed2004

Modeling of elastic modulus evolution of cirrhotic human liver.

A micromechanics-based composite model is developed for the elastic behavior and its modulus evolution of cirrhotic human liver correlated with different pathological stages. Microstructurally, the cirrhotic liver is hypothesized to be pathologically elastic nodules embedded in the soft tissue matrix whose hyperelastic behavior is controlled by the Veronda-Westmann model. Under finite deformation, the total strain energy of the liver is collected through the combination of that in nodule particles and that in the tissue matrix. The overall constitutive relation of the pathological liver can further be established through the nonlinear hyperelasticity theory. Predictions of the elastic modulus and its pathological evolution are compared with available experimental data.

Computer Simulation↗
PubMed2004

Craniofacial measurements based on 3D-CT volume rendering: implications for clinical applications.

OBJECTIVES: This study was designed to determine the precision and accuracy of anthropometric measurements using three-dimensional computed tomography (3D-CT) volume rendering by computer systems for craniofacial clinical applications, and to compare the craniometric landmarks using bone and soft tissue protocols. METHODS: The study population consisted of 13 cadaver heads that were examined with spiral CT. The archived CT data were transferred to a workstation, and 3D-CT volume rendered images were generated using computer graphics tools. Linear measurements (n = 10), based upon conventional craniometric anatomical landmarks (n = 08), were identified in 2D-CT and in 3D-CT images by two radiologists twice each independently, and then performed by 3D-CT imaging using a computer graphics systems using bone and soft tissue protocols. In total, 520 imaging measurements were made. The soft tissues were subsequently removed from the cadaver heads and the measurements were repeated using an electromagnetic 3 Space trade mark digitizer. RESULTS: The results demonstrated no statistically significant difference between interobserver and intraobserver measurements or between imaging and physical measurements in both 3D-CT protocols. The standard error was found to be between 0.45% and 1.44% for all the measurements in both protocols, indicating a high level of precision. Furthermore, there was no statistically significant difference between imaging and physical measurements (P > 0.01). The error between the mean actual and mean 3D-based linear measurements was 0.83% for bone and 1.78% for soft tissue measurements, demonstrating high accuracy of both 3D-CT protocols. CONCLUSIONS: 3D-CT volume rendering images using craniometric measurements can be used for anthropological studies involving craniofacial applications.

Aged↗
PubMed2003

Craniofacial computed tomography scanning: technology, applications and future trends.

OBJECTIVES: Craniofacial imaging in three dimensions depends on computed tomography (CT) and related technologies. This paper explains the state-of-the-art for medical and dedicated craniofacial cone-beam CT scanners. METHOD: Current medical CT scanners are surveyed, especially the recently announced 16 simultaneous slice models with subsecond source-detector rotation times and spiral/helical third generation geometry. The medical scanner technology is contrasted with dedicated low-cost craniofacial cone-beam CT scanners to delineate the relevant technologies and clarify the differences. RESULTS: CT scanners performance in any task is determined by their detectors and reconstruction algorithm primarily and to a lesser extent by the X-ray source, dose utilization, computational and display electronics, and software for post-processing. Each of these components differs between medical and low-cost cone-beam scanners, and the differences are tabulated and explained. CONCLUSION: Low-cost craniofacial CT scanners are significantly different from general purpose medical CT scanners, with compromises in technical performance. Despite their limitations, these instruments are remarkably useful for their intended application domain and should improve as computers continue to increase their performance.

Algorithms↗
PubMed2003

Craniofacial imaging informatics and technology development.

PURPOSE: 'Craniofacial imaging informatics' refers to image and related scientific data from the dentomaxillofacial complex, and application of 'informatics techniques' (derived from disciplines such as applied mathematics, computer science and statistics) to understand and organize the information associated with the data. METHOD: Major trends in information technology determine the progress made in craniofacial imaging and informatics. These trends include industry consolidation, disruptive technologies, Moore's law, electronic atlases and on-line databases. Each of these trends is explained and documented, relative to their influence on craniofacial imaging. RESULTS: Craniofacial imaging is influenced by major trends that affect all medical imaging and related informatics applications. The introduction of cone beam craniofacial computed tomography scanners is an example of a disruptive technology entering the field. An important opportunity lies in the integration of biologic knowledge repositories with craniofacial images. CONCLUSION: The progress of craniofacial imaging will continue subject to limitations imposed by the underlying technologies, especially imaging informatics. Disruptive technologies will play a major role in the evolution of this field.

Databases as Topic↗
PubMed2003

Analytic modeling of breast elastography.

The elastic moduli of tumors change during their pathological evolution. Elastographic imaging has potential for detecting and characterizing cancers by mapping the stiffness distribution in tissues. In this paper a micromechanics-based analytical method was developed to detect the location, size, and elastic modulus of a tumor mass embedded in a symmetric two-dimensional breast tissue. A closed-form solution for the strain elastograms (forward problem) was derived. A computational algorithm for the inverse problem was developed for the detection, localization, and characterization of a heterogeneous mass embedded in a breast tissue. Numerical examples were presented to evaluate the proposed method's performance. The detectability of a tumor mass was estimated with respect to lesion location, size, and modulus contrast ratio. It was shown that the micromechanics theory provides a powerful tool for the diagnosis of breast cancer.

Absorptiometry, Photon↗
PubMed2002

3D volume rendering using multislice CT for dental implants.

OBJECTIVES: To determine the precision and accuracy of three-dimensional (3D) volume rendering spiral multislice computed tomography (CT)-based linear measurements of the mental foramen for dental implants, in vitro, and their precision, in vivo. METHODS: Five cadaver heads were imaged by multislice spiral CT (Toshiba Aquilion) with 0.5 mm thick axial slices (0.5 mm/0.5 s of table feed) at 0.5 mm interval reconstructions. The image data sets were transferred to a networked computer workstation. Using computer graphics the data were analysed with a 3D volume rendering technique using Vitrea software. Two oral and maxillofacial radiologists, independently, made electronic linear measurements from the superior border of the mental foramen to the crest of the alveolar process. The soft tissues were removed and physical measurements made using a 3 Space (Polhemus, Colchester, VT, USA) electromagnetic digitizer with a personal computer running Windows 98. The same linear measurements of 15 patients using the same imaging methodology were performed and the precision was analysed. RESULTS: The findings showed no statistically significant inter- or intra-observer differences in vitro and in vivo, or between imaging and physical measurements in vitro (P>0.05). CONCLUSIONS: 3D multislice spiral CT imaging allows highly accurate measurements for dental implant placement in proximity to the mental foramen. Computer graphics software, using volume rendering is suitable for implant planning.

Aged↗
PubMed2001

Image-based dose planning of intracavitary brachytherapy: registration of serial-imaging studies using deformable anatomic templates.

PURPOSE: To demonstrate that high-dimensional voxel-to-voxel transformations, derived from continuum mechanics models of the underlying pelvic tissues, can be used to register computed tomography (CT) serial examinations into a single anatomic frame of reference for cumulative dose calculations. METHODS AND MATERIALS: Three patients with locally advanced cervix cancer were treated with CT-compatible intracavitary (ICT) applicators. Each patient underwent five volumetric CT examinations: before initiating treatment, and immediately before and after the first and second ICT insertions, respectively. Each serial examination was rigidly registered to the patient's first ICT examination by aligning the bony anatomy. Detailed nonrigid alignment for organs (or targets) of interest was subsequently achieved by deforming the CT exams as a viscous-fluid, described by the Navier-Stokes equation, until the coincidence with the corresponding targets on CT image was maximized. In cases where ICT insertion induced very large and topologically complex rearrangements of pelvic organs, e.g., extreme uterine canal reorientation following tandem insertion, a viscous-fluid-landmark transformation was used to produce an initial registration. RESULTS: For all three patients, reasonable registrations for organs (or targets) of interest were achieved. Fluid-landmark initialization was required in 4 of the 11 registrations. Relative to the best rigid bony landmark alignment, the viscous-fluid registration resulted in average soft-tissue displacements from 2.8 to 28.1 mm, and improved organ coincidence from the range of 5.2% to 72.2% to the range of 90.6% to 100%. Compared to the viscous-fluid transformation, global registration of bony anatomy mismatched 5% or more of the contoured organ volumes by 15-25 mm. CONCLUSION: Pelvic soft-tissue structures undergo large deformations and displacements during the external-beam and multiple-ICT course of radiation therapy for locally advanced cervix cancer. These changes cannot be modeled by the conventional rigid landmark transformation method. In the current study, we found that the deformable anatomic template registration method, based on continuum-mechanics models of deformation, successfully described these large anatomic shape changes before and after ICT. These promising modeling results indicate that realistic registration of the cumulative dose distribution to the organs (or targets) of interest for radiation therapy of cervical cancers is achievable.

Algorithms↗
PubMed2001

Semiautomatic segmentation of the cochlea using real-time volume rendering and regional adaptive snake modeling.

The human cochlea in the inner ear is the organ of hearing. Segmentation is a prerequisite step for 3-dimensional modeling and analysis of the cochlea. It may have uses in the clinical practice of otolaryngology and neuroradiology, as well as for cochlear implant research. In this report, an interactive, semiautomatic, coarse-to-fine segmentation approach is developed on a personal computer with a real-time volume rendering board. In the coarse segmentation, parameters, including the intensity range and the volume of interest, are defined to roughly segment the cochlea through user interaction. In the fine segmentation, a regional adaptive snake model designed as a refining operator separates the cochlea from other anatomic structures. The combination of the image information and expert knowledge enables the deformation of the regional adaptive snake effectively to the cochlear boundary, whereas the real-time volume rendering provides users with direct 3-dimensional visual feedback to modify intermediate parameters and finalize the segmentation. The performance is tested using spiral computed tomography (CT) images of the temporal bone and compared with the seed point region growing with manual modification of the commercial Analyze software. Our method represents an optimal balance between the efficiency of automatic algorithm and the accuracy of manual work.

Cochlea↗
PubMed2001

Design of a PC-based multimedia telemedicine system for brain function teleconsultation.

During time-critical brain surgery, the detection of developing cerebral ischemia is particularly important because early therapeutic intervention may reduce the mortality of the patient. The purpose of this system is to provide an efficient means of remote teleconsultation for the early detection of ischemia, particularly when subspecialists are unavailable. The hardware and software design architecture for the multimedia brain function teleconsultation system including the dedicated brain function monitoring system is described. In order to comprehensively support remote teleconsultation, multi-media resources needed for ischemia interpretation were included: EEG signals, CSA, CD-CSA, radiological images, surgical microscope video images and video conferencing. PC-based system integration with standard interfaces and the operability over the Ethernet meet the cost-effectiveness while the modular software was customized with a diverse range of data manipulations and control functions necessary for shared workspace and standard interfaces.

Brain Ischemia↗
PubMed2001

Evaluation of an ossifying fibroma using three-dimensional computed tomography.

We describe the appearance of a mandibular ossifying fibroma in spiral computed tomography-based multiplanar (MPR) and three-dimensional (3D) reconstruction using computer graphics. The usefulness of the interactive reconstructed images, especially using a vascular protocol, for qualitative and quantitative analyses is demonstrated. This technique is an important adjunct to evaluation with conventional axial CT.

Adolescent↗
PubMed2001

The craniofacial anomalies archive at St. Louis Children's Hospital: 20 years of craniofacial imaging experience.

This article describes how the Craniofacial Imaging Laboratory at the Cleft Palate and Craniofacial Deformities Institute, St. Louis Children's Hospital, Washington University Medical Center, has developed an electronic archive for the storage of computed tomography image digital data that is independent of scanner hardware and independent of units of storage media (i.e., floppy disks and optical disks). The archive represents one of the largest repositories of high-quality computed tomography data of children with craniofacial deformities in the world. Archiving reconstructed image data is essential for comparative imaging, surgical simulation, quantitative analysis, and use with solid model fabrication (e.g., stereolithography). One tertiary craniofacial center's experience in the establishment and maintenance of such an archive through three generations of storage technology is reported. The current archive is housed on an external 35-GB hard drive attached to a Windows-based desktop server. Data in the archive were categorized by specific demographics into groups of patients, number of scans, and diagnoses. The Craniofacial Imaging Laboratory archive currently contains computed tomography image digital data for 1827 individual scans. The earliest scan was done in 1980; the most recently stored scan for the purposes of this report occurred in May of 2000. The average number of scans archived per complete year was 94, with a range of 59 to 138. Of the 1827 total scans, 74 percent could be classified into specific diagnostic categories. The majority of the archive (55 percent) is composed of the following five diagnoses: sagittal synostosis (17 percent), unilateral coronal synostosis (11 percent), hemifacial microsomia (10 percent), plagiocephaly without synostosis (10 percent), and metopic synostosis (7 percent). Storage of computed tomography image data in a digital archive currently allows for continuous upgrading of image display and analysis and facilitates longitudinal and cross-sectional studies, both intramural and extramural. Internet access for clinical and research purposes is feasible, but contingent on protection of patient confidentiality. The future of digital imaging regarding craniofacial computed tomography scan storage and processing is also discussed.

Child↗
PubMed2000

Fast algorithm for soft straightening of the colon.

RATIONALE AND OBJECTIVES: In this study, the authors developed a fast algorithm for soft straightening of the colon with computed tomographic data that greatly accelerates the unraveling process based on the interpolation of representative electric force lines. MATERIALS AND METHODS: Each curved cross section of the colon is defined by electric force lines of a common origin on an electrically charged central path and is constructed by interpolating most of these force lines from a limited number of representative force lines that are traced directly. Both a synthetic colon phantom and a colon in a living patient were used to demonstrate the feasibility of the fast interpolation algorithm compared with direct implementation for soft straightening of the colon. RESULTS: The interpolation-based soft-straightening algorithm ran approximately 40 times faster than the direct implementation of the electric field-based soft-straightening algorithm. CONCLUSION: The fast algorithm for soft straightening of the colon has potential for use in computed tomographic colonography.

Algorithms↗
PubMed2000

Distortion reduction for fast soft straightening of the colon.

RATIONALE AND OBJECTIVES: The purpose of this study was to suppress the geometric distortion associated with soft straightening of the colon by moderately adjusting curved cross sections, which is equivalent to appropriately modifying the underlying electrical field. MATERIALS AND METHODS: A computational mechanism to reduce the geometric distortion associated with soft straightening was developed. Because the cause of distortion is uneven sampling of the colon wall with curved cross sections, the curved cross sections formed according to a numerically simulated electrical field were redistributed in the distortion reduction process. This mechanism can be directly incorporated into a previously published fast soft-straightening algorithm. Simulations were performed to evaluate the effectiveness of the mechanism, and a phantom colon with digitally implanted, spherical polyps was straightened and rendered to visually display the efficacy of the mechanism. RESULTS: The distortion reduction mechanism was advantageous regarding shape preservation of polyps and alleviated distortion substantially. The mechanism occupied only a small portion of the total processing time. CONCLUSION: The distortion reduction mechanism can effectively reduce the geometric distortion associated with soft straightening at little computational cost and has potential for use with computed tomographic colonography.

Algorithms↗
PubMed2000

Accuracy and precision of spiral CT in the assessment of neoplastic lesions associated with the mandible.

RATIONALE AND OBJECTIVES: The purpose of this study was to determine the accuracy (validity) and precision (reliability) of spiral computed tomographic (CT) images by using film- and computer graphics-based measurements of simulated neoplastic lesions associated with the mandible. MATERIALS AND METHODS: Four cadaver heads, each with two simulated tumors containing contrast medium positioned medial to the mandibles, were examined by using a subsecond spiral CT scanner. Data were transferred to film and to a computer workstation. With computer graphics, data were analyzed by using multiplanar reconstructed images. Linear measurements of the length, width, and depth of simulated tumors were made by two observers, twice each, on the film scans by using manual calipers and on the multiplanar reconstructed images by using computerized measurements. The soft tissues were then removed from the cadavers and the same measurements made by using the same calipers. RESULTS: No statistically significant differences between computer graphics- or film-based measurements and physical measurements (P > .05) or between inter- and intraobserver measurements (P > .05) were found. CONCLUSION: The authors found high reproducibility of measurements for all dimensions. Spiral CT allows accurate computer graphics- and film-based measurements of neoplastic lesions associated with the mandible.

Aged↗
PubMed2000

Fast iterative algorithm for metal artifact reduction in X-ray CT.

RATIONALE AND OBJECTIVES: The reduction of metal artifacts in x-ray computed tomography (CT) has important clinical applications. An iterative method adapted from the expectation maximization (EM) formula for emission CT was shown to be effective for metal artifact reduction, but its computational speed is slow. The goal of this project was to accelerate that iterative method for metal artifact reduction. MATERIALS AND METHODS: Using the row-action/ordered-subset (EM) formula for emission CT as a basis, the authors developed a fast iterative algorithm for metal artifact reduction. In each iteration of this algorithm, both reprojection from an intermediate image and backprojection from discrepancy data are performed. RESULTS: The feasibility of the fast iterative algorithm was demonstrated in numerical and phantom experiments. In comparison with the nonaccelerated iterative algorithm, the speed of iterative metal artifact reduction is improved by an order of magnitude given image quality in terms of visual inspection, I-divergence in the projection domain, and the euclidean distance in the image domain. CONCLUSION: The fast iterative algorithm corrects intermediate reconstruction according to subsets of projections and produces satisfactory image quality at a much faster speed than the previously published iterative algorithm. This algorithm has important potential in clinical applications, such as orthopedic, oncologic, and dental imaging.

Algorithms↗