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Martin A Lindquist

Publications and source records attributed to Martin A Lindquist.

3 recordsLinked to original sources

Validity and power in hemodynamic response modeling: a comparison study and a new approach.

One of the advantages of event-related functional MRI (fMRI) is that it permits estimation of the shape of the hemodynamic response function (HRF) elicited by cognitive events. Although studies to date have focused almost exclusively on the magnitude of evoked HRFs across different tasks, there is growing interest in testing other statistics, such as the time-to-peak and duration of activation as well. Although there are many ways to estimate such parameters, we suggest three criteria for optimal estimation: 1) the relationship between parameter estimates and neural activity must be as transparent as possible; 2) parameter estimates should be independent of one another, so that true differences among conditions in one parameter (e.g., hemodynamic response delay) are not confused for apparent differences in other parameters (e.g., magnitude); and 3) statistical power should be maximized. In this work, we introduce a new modeling technique, based on the superposition of three inverse logit functions (IL), designed to achieve these criteria. In simulations based on real fMRI data, we compare the IL model with several other popular methods, including smooth finite impulse response (FIR) models, the canonical HRF with derivatives, nonlinear fits using a canonical HRF, and a standard canonical model. The IL model achieves the best overall balance between parameter interpretability and power. The FIR model was the next-best choice, with gains in power at some cost to parameter independence. We provide software implementing the IL model.

Brain↗

A generalization of the two-dimensional prolate spheroidal wave function method for nonrectilinear MRI data acquisition methods.

The two-dimensional (2-D) prolate spheroidal wave function (2-D PSWF) method was previously introduced as an efficient method for trading off between spatial and temporal resolution in magnetic resonance imaging (MRI), with minimal penalty due to truncation and partial volume effects. In the 2-D PSWF method, the k-space sampling area and a matching 2-D PSWF filter, with optimal signal concentration and minimal truncation artifacts, are determined by the shape and size of a given convex region of interest (ROI). The spatial information in the reduced k-space data is used to calculate the total image intensity over a nonsquare ROI instead of producing a low-resolution image. This method can be used for tracking dynamic signals from non-square ROIs using a reduced k-space sampling area, while achieving minimal signal leakage. However, the previous theory is limited to the case of rectilinear sampling. In order to make the 2-D PSWF method more suitable for dynamic studies, this paper presents a generalized version of the 2-D PSWF theory that can be applied to nonrectilinear data acquisition methods. The method is applied to an fMRI study using a spiral trajectory, which illustrates the methods efficiency at tracking hemodynamic signals with high temporal resolution.

Algorithms↗

Two dimensional prolate spheroidal wave functions for MRI.

The tradeoff between spatial and temporal resolution is often used to increase data acquisition speed for dynamic MR imaging. Reduction of the k-space sampling area, however, leads to stronger partial volume and truncation effects. A two dimensional prolate spheroidal wave function (2D-PSWF) method is developed to address these problems. Utilizing prior knowledge of a given region of interest (ROI) and the spatial resolution requirement as constraints, this method tailors the k-space sampling area with a matching 2D-PSWF filter so that optimal signal concentration and minimal truncation artifacts are achieved. The k-space sampling area is reduced because the shape and size of the sampling area match the resolution posed by the non-rectangular shape of a convex ROI. The 2D-PSWF method offers an efficient way for spatial and temporal tradeoff with minimal penalty due to truncation, and thus, it promises a wide range of applications in MRI research.

Adult↗