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Michał J Chmielewski

Publications and source records attributed to Michał J Chmielewski.

4 recordsLinked to original sources
PubMed2006

Cadmium(II) and zinc(II) complexes of S-confused thiaporphyrin.

The synthesis of 5,10,15,20-tetraphenyl-2-thia-21-carbaporphyrin [S-confused thiaporphyrin, (SCPH)H] was optimized. The formation of the phlorin was detected, which was saturated at the meso carbon adjacent to thiophene. Phlorin converted readily to (SCPH)H in the final oxidation process. Insertion of cadmium(II) and zinc(II) into S-confused thiaporphyrin yielded (SCPH)Cd(II)Cl and (SCPH)Zn(II)Cl complexes. The macrocycle acted as a monoanionic ligand. Three nitrogen atoms and the C(21)H fragment of the inverted thiophene occupied equatorial positions. The compensation of the metal charge required the apical chloride coordination. The characteristic C(21)H resonances of the inverted thiophene ring were located at 1.71 and 1.86 ppm in the 1H NMR spectra of (SCPH)Cd(II)Cl and (SCPH)Zn(II)Cl, respectively. The proximity of the thiophene fragment to the metal ion induced direct scalar couplings between the spin-active nucleus of the metal (111/113Cd) and the adjacent 1H nucleus (J(CdH) = 8.97 Hz). The interaction of the metal ion and C(21)H also was reflected by significant changes of C(21) chemical shifts: (SCPH)Zn(II)Cl, 92.9 ppm and (SCPH)Cd(II)Cl, 88.2 ppm (free ligand (SCPH)H, 123.7 ppm). The X-ray analysis performed for (SCPH)Cd(II)Cl confirmed the side-on cadmium-thiophene interaction. The Cd...C(21) distance (2.615(7) A) exceeded the typical Cd-C bond lengths, but was much shorter than the corresponding van der Waals contact. The density functional theory (DFT) was applied to model the molecular structures of zinc(II) and cadmium(II) complexes of S-confused thiaporphyrin. Subsequent AIM analysis demonstrated that the accumulation of electron density between the metal and thiophene, which is necessary to induce these couplings, was fairly small. A bond path linked the cadmium(II) ion to the proximate C(22) carbon of the thiophene.

Journal Article↗
PubMed2006

Anion binding versus intramolecular hydrogen bonding in neutral macrocyclic amides.

Although amide groups are important hydrogen-bond donors in natural and synthetic anion receptors, studies on structure-affinity relationships of amide-based macrocyclic receptors are still very limited. Therefore, we synthesized a series of macrocyclic tetraamides 5-8 derived from 1,3-benzenedicarboxylic (isophthalic) acid and aliphatic alpha,omega-diamines of different lengths. (1)H NMR titrations in DMSO solution show that the anion affinity of these receptors decreases with increasing size of the macrocycle irrespective of the anion, and this suggests a minor role of geometric complementarity. Comparison with their previously studied pyridine congeners reveals that the isophthalic acid based macrocycles are less potent, in contrast to what was found for simple model diamides. Combined theoretical and experimental structural studies were carried out to determine the reasons behind this behaviour. The results show that the unexpectedly low anion binding ability of the isophthalic acid-based receptors is due to the self-complementary nature of the isophthalic bis-amide fragments: when two such moieties are present within a sufficiently flexible macrocycle, they adopt syn-anti conformations and bind each other by two strong intramolecular hydrogen bonds that close the macrocyclic cavity. Nevertheless, anion binding is able to break these hydrogen bonds and switch a macrocycle into a convergent all-syn conformation. Despite the ill-preorganized conformation, 20-membered receptor 6 is better than either its open-chain analogue (macrocyclic effect) and/or its isomer having differently placed carbonyl groups. The crystal structures of four anion complexes of the macrocyclic receptors are reported. X-ray studies and solution NMR data confirmed the inclusive nature of the complexes and pointed to strong involvement of aromatic CH hydrogen atoms in anion binding.

Amides↗
PubMed2005

Anion recognition by neutral macrocyclic amides.

Although amides often serve as anchoring groups in natural and synthetic anion receptors, the structure-affinity relationship studies of amide-based macrocyclic receptors are still very limited. Therefore, we decided to investigate the influence of the size of the macroring on the strength and selectivity of anion binding by uncharged, amide-based receptors. With this aim, we synthesized a series of macrocyclic tetraamides derived from 2,6-pyridinedicarboxylic acid and aliphatic alpha,omega-diamines of different lengths. X-ray analysis shows that all ligands studied adopt expanded conformations in the solid state with the convergent arrangement of all four hydrogen-bond donors. 1H NMR titrations in DMSO solution revealed a significant effect of the ring size on the stability constants of anion complexes; the 20-membered macrocyclic tetraamide 2 is a better anion receptor than its both 18- and 24-membered analogues. This effect cannot be interpreted exclusively in terms of matching between anion diameter and the size of macrocyclic cavity, because 2 forms the most stable complexes with all anions studied, irrespective of their sizes. However, geometric complementarity manifests in extraordinarily high affinity of 2 towards the chloride anion. The results obtained for solutions were interpreted in the light of solid-state structural studies. Taken together, these data suggest that anion binding by this family of macrocycles is governed by competitive interplay between their ability to adjust to a guest, requiring longer aliphatic spacers, and preorganization, calling for shorter spacers. The 20-membered receptor 2 is a good compromise between these factors and, therefore, it was selected as a promising leading structure for further development of anion receptors. Furthermore, the study of an open chain analogue of 2 revealed a substantial macrocyclic effect. X-ray structure of the acyclic model 14 suggests that this may be due to its ill-preorganized conformation, stabilized by two intramolecular hydrogen bonds.

Amides↗