Biomedical subjects

Michael C. Mackey

Publications and source records attributed to Michael C. Mackey.

5 recordsLinked to original sources

PubMed2001

Dynamic behavior in mathematical models of the tryptophan operon.

This paper surveys the general theory of operon regulation as first formulated by Goodwin and Griffith, and then goes on to consider in detail models of regulation of tryptophan production by Bliss, Sinha, and Santillan and Mackey, and the interrelationships between them. We further give a linear stability analysis of the Santillan and Mackey model for wild type E. coli as well as three different mutant strains that have been previously studied in the literature. This stability analysis indicates that the tryptophan production systems should be stable, which is in accord with our numerical results. (c) 2001 American Institute of Physics.

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PubMed2001

Molecular, metabolic, and genetic control: An introduction.

The living cell is a miniature, self-reproducing, biochemical machine. Like all machines, it has a power supply, a set of working components that carry out its necessary tasks, and control systems that ensure the proper coordination of these tasks. In this Special Issue, we focus on the molecular regulatory systems that control cell metabolism, gene expression, environmental responses, development, and reproduction. As for the control systems in human-engineered machines, these regulatory networks can be described by nonlinear dynamical equations, for example, ordinary differential equations, reaction-diffusion equations, stochastic differential equations, or cellular automata. The articles collected here illustrate (i) a range of theoretical problems presented by modern concepts of cellular regulation, (ii) some strategies for converting molecular mechanisms into dynamical systems, (iii) some useful mathematical tools for analyzing and simulating these systems, and (iv) the sort of results that derive from serious interplay between theory and experiment. (c) 2001 American Institute of Physics.

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PubMed1996

Propagating fronts, chaos and multistability in a cell replication model.

Numerical solutions to a model equation that describes cell population dynamics are presented and analyzed. A distinctive feature of the model equation (a hyperbolic partial differential equation) is the presence of delayed arguments in the time (t) and maturation (x) variables due to the nonzero length of the cell cycle. This transport like equation balances a linear convection with a nonlinear, nonlocal, and delayed reaction term. The linear convection term acts to impress the value of u(t,x=0) on the entire population while the death term acts to drive the population to extinction. The rich phenomenology of solution behaviour presented here arises from the nonlinear, nonlocal birth term. The existence of this kinetic nonlinearity accounts for the existence and propagation of soliton-like or front solutions, while the increasing effect of nonlocality and temporal delays acts to produce a fine periodic structure on the trailing part of the front. This nonlinear, nonlocal, and delayed kinetic term is also shown to be responsible for the existence of a Hopf bifurcation and subsequent period doublings to apparent "chaos" along the characteristics of this hyperbolic partial differential equation. In the time maturation plane, the combined effects of nonlinearity, nonlocality, and delays leads to solution behaviour exhibiting spatial chaos for certain parameter values. Although analytic results are not available for the system we have studied, consistency and validation of the numerical results was achieved by using different numerical methods. A general conclusion of this work, of interest for the understanding of any biological system modeled by a hyperbolic delayed partial differential equation, is that increasing the spatio-temporal delays will often lead to spatial complexity and irregular wave propagation. (c) 1996 American Institute of Physics.

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PubMed1993

Solution multistability in first-order nonlinear differential delay equations.

The dependence of solution behavior to perturbations of the initial function (IF) in a class of nonlinear differential delay equations (DDEs) is investigated. The structure of basins of attraction of multistable limit cycles is investigated. These basins can possess complex structure at all scales measurable numerically although this is not necessarily the case. Sensitive dependence of the asymptotic solution to perturbations in the initial function is also observed experimentally using a task specific electronic analog computer designed to investigate the dynamics of an integrable first-order DDE.

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PubMed1992

Bifurcations and traveling waves in a delayed partial differential equation.

Here cell population dynamics in which there is simultaneous proliferation and maturation is considered. The resulting mathematical model is a nonlinear first-order partial differential equation for the cell density u(t,x) in which there is retardation in both temporal (t) and maturation variables (x), and contains three parameters. The solution behavior depends on the initial function varphi(x) and a three component parameter vector P=(delta,lambda,r). For strictly positive initial functions, varphi(0) greater, similar 0, there are three homogeneous solutions of biological (i.e., non-negative) importance: a trivial solution u(t) identical with 0, a positive stationary solution u(st), and a time periodic solution u(p)(t). For varphi(0)=0 there are a number of different solution types depending on P: the trivial solution u(t), a spatially inhomogeneous stationary solution u(nh)(x), a spatially homogeneous singular solution u(s), a traveling wave solution u(tw)(t,x), slow traveling waves u(stw)(t,x), and slow traveling chaotic waves u(scw)(t,x). The regions of parameter space in which these solutions exist and are locally stable are delineated and studied.

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