Biomedical subjects

Michael Monkenbusch

Publications and source records attributed to Michael Monkenbusch.

7 recordsLinked to original sources

PubMed2006

Starlike dendrimers in solutions: structural properties and internal dynamics.

We measured the shape and the internal dynamics of starlike dendrimers under good solvent conditions with small-angle neutron scattering and neutron spin-echo (NSE) spectroscopy, respectively. Architectural parameters such as the spacer length and generation were varied in a systematic manner. Structural changes occurring in the dendrimers as a function of these parameters are discussed, i.e., in terms of the fractal dimension and deviations of the radius of gyration from the Gaussian value. A first cumulant evaluation of the NSE spectra for each scattering vector q separately yields the length scale dependent relaxation rates. We observe a local minimum in the normalized relaxation rates Omega(q)q(3) on length scales corresponding to the overall dendrimer dimension. The dynamics is discussed within a Rouse-Zimm approach generalized to the case of starlike dendrimers of arbitrary geometry. The model allows an identification of the modes contributing to the relaxation of the dendrimer in the q and time range of the NSE experiment. The local minimum is due to collective breathing motions of (parts of) the dendrons relative to each other. Shape fluctuations are not observed.

Journal Article↗

PubMed2006

Plasticizer effect on the dynamics of polyvinylchloride studied by dielectric spectroscopy and quasielastic neutron scattering.

We have studied the influence of plasticization on the microscopic dynamics of a glass-forming polymer. For this purpose we studied polyvinylchloride (PVC) with and without the commercially used plasticizer dioctylphthalate (DOP). We used dielectric spectroscopy and inelastic neutron scattering employing the neutron spin echo (NSE) technique. For both kinds of spectra the alpha relaxation could be consistently described by a model involving a distribution of individual relaxations of the Kohlrausch type. In contrast to earlier studies it turned out that an asymmetric distribution is necessary to fit the data at the lower temperatures investigated here. The shape parameters of the distribution (width, skewness) for PVC and PVC/DOP turned out to coincide when the characteristic relaxation times were the same. This means that the plasticizer only induces a remapping of the temperature dependence of the alpha relaxation. Comparison of NSE spectra S(Q,t)S(Q) at different scattering vectors Q gave the result that the slowing down at the structure factor peak Q(max) is surprisingly small for PVC while it is in the normal range for PVC/DOP.

Journal Article↗

PubMed2006

Dynamic heterogeneity in hydrogen-bonded polymers.

We report on neutron spin echo experiments on hydrogen-bonded polymers and compare the experimentally found dynamical structure factor with theoretical predictions. Surprisingly, we find that in the melt phase the expected scaling of the Rouse dynamics is not satisfied. We propose an explanation based upon the large spatial volume occupied by the connecting groups. When the effects of these bulky groups on the local friction are taken into account, the usual scaling behavior is restored.

Journal Article↗

PubMed2005

Coupled protein domain motion in Taq polymerase revealed by neutron spin-echo spectroscopy.

Long-range conformational changes in proteins are ubiquitous in biology for the transmission and amplification of signals; such conformational changes can be triggered by small-amplitude, nanosecond protein domain motion. Understanding how conformational changes are initiated requires the characterization of protein domain motion on these timescales and on length scales comparable to protein dimensions. Using neutron spin-echo spectroscopy (NSE), normal mode analysis, and a statistical-mechanical framework, we reveal overdamped, coupled domain motion within DNA polymerase I from Thermus aquaticus (Taq polymerase). This protein utilizes correlated domain dynamics over 70 angstroms to coordinate nucleotide synthesis and cleavage during DNA synthesis and repair. We show that NSE spectroscopy can determine the domain mobility tensor, which determines the degree of dynamical coupling between domains. The mobility tensor defines the domain velocity response to a force applied to it or to another domain, just as the sails of a sailboat determine its velocity given the applied wind force. The NSE results provide insights into the nature of protein domain motion that are not appreciated by conventional biophysical techniques.

Models, Molecular↗

PubMed2005

Dynamic properties of microemulsions modified with homopolymers and diblock copolymers: the determination of bending moduli and renormalization effects.

The properties of bicontinuous microemulsions, consisting of water, oil, and a surfactant, can be modified by the addition of diblock copolymers (boosting effect) and homopolymers (inverse boosting effect) or a combination of both. Here, the influence of the addition of homopolymers (PEP(X) and PEO(X), X=5k or 10k molecular weight) on the dynamics of the surfactant layer is studied with neutron spin echo spectroscopy (NSE). Combining the results with the previous findings for diblock copolymers allows for a better separation of viscosity and bending modulus effects. With the addition of homopolymers, a significant increase of the relaxation rate compared to the pure microemulsion has been observed. The influence on the bending rigidity kappa is measured with NSE experiments. Homopolymer addition reduces kappa by up to Deltakappa approximately -0.5k(B)T, whereas the diblock copolymer yields an increase of kappa by approximately 0.3k(B)T. Comparison of the bending moduli that are obtained by analysis of the dynamics to those obtained from small angle neutron scattering (SANS) sheds light on the different renormalization length scales for NSE and SANS. Variation of the surfactant concentration at otherwise constant conditions of homopolymer or diblock-copolymer concentration shows that NSE results are leading to the pure bending rigidity, while the renormalized one is measured with SANS.

Journal Article↗

PubMed2004

Concentration fluctuations in polymer gel investigated by neutron scattering: static inhomogeneity in swollen gel.

By using small-angle neutron scattering (SANS) and neutron spin echo (NSE), we have quantitatively investigated the static inhomogeneity in poly (N-isopropyl acrylamide) gel (PNIPA) in microscopic length scales of 0.015<q<0.16 A(-1), where q is a wave number of scattered neutrons. NSE revealed that at lower q( congruent with 0.015 A(-1)), the concentration fluctuations in the PNIPA gel decays more slowly as compared to the PNIPA solution without crosslinks. According to our scenario that the slower decay found for the PNIPA gel is due to the static inhomogeneity coexisting in the swollen gel, small-angle scattering S(q) obtained by SANS has been quantitatively decomposed into thermal and static scattering components, respectively, S(th)(q) and S(st)(q). It was further revealed that (i) the q-region where S(st)(q) becomes dominant is closely related to that for the abnormal butterfly scattering under stretching, and (ii) as the temperature increases toward the temperature for volume phase transition, S(st)(q) of a squared Lorentzian shape increases more drastically than S(th)(q) of a Lorentzian shape. These findings were quantitatively understood in the theoretical framework by Panyukov and Rabin [Macromolecules 29, 7960 (1996)] or by Onuki [J. Phys. II. France 2, 45 (1992)], taking into account stress-fluctuation coupling under coexistence of the inherent structural heterogeneity in the real gel. We further found that the static inhomogeneity showing S(st)(q) seems to relate to the necklacelike microstructure, appearing after a shallow quench into the collapsed phase.

Journal Article↗

PubMed2002

Neutron scattering study on the structure and dynamics of oriented lamellar phase microemulsions.

Lamellar phases consisting of water and oil with intervening surfactant monolayer interfaces (eventually containing low molecular weight amphiphilic block-copolymers) are studied. Structural and dynamical investigations of oriented lamellar phases at the length scale of the intermembrane distance and beyond are performed using small-angle neutrons scattering and neutron spin-echo spectroscopy. The data analysis in terms of static and dynamic structure factors for a stack of elastic interfacial membranes yields information of the membrane curvature elasticity and membrane interactions in terms of phenomenological parameters such as the bending elastic modulus kappa and compression modulus (-)B, and on the dissipation related to the viscosity eta. The influence of the block-copolymers anchored to the surfactant monolayers is studied for a series of lamellar phase microemulsions containing equal volume fraction of surfactant and polymer, by varying only the polymer molecular weight. Based on numerical evaluations and fits to the data the conditions of applicability of the available theoretical concepts are discussed.

Journal Article↗