Biomedical subjects

Michihiko Ike

Publications and source records attributed to Michihiko Ike.

At least 19 recordsLinked to original sources

PubMed2006

Reduction kinetics of As (V) to As (III) by a dissimilatory arsenate-reducing bacterium, Bacillus sp. SF-1.

This study proposes a kinetic model that accounts for the toxicity of both arsenate and arsenite and characterizes the arsenate reduction ability of a dissimilatory arsenate-reducing bacterium, Bacillus sp. SF-1 as a bioremediation agent. The model results correlated well with a series of batch reduction experiments conducted anaerobically in serum bottles with initial arsenate concentrations of 360, 735, and 1,500 mg-As/L. The reduction rate was expressed by the Haldane equation that describes the inhibitory effect of high concentrations of arsenate. The reduction rate constant k(r), half saturation constant K(S), and inhibition constant K(I) were estimated respectively as 1.2 x 10(9) mg-As/cells/h, 1.5 x 10(2) mg-As/L, and 4.2 x 10(2) mg-As/L. Lethal effects of arsenite that is accumulated as the end-product of arsenate reduction were expressed by the first-order term with a lethal constant of 2.7 x 10(-4) L/mg-As/h. The yield for the bacterial cells by arsenate respiration was estimated at 4.0 x 10(8) cells/mg-As.

Arsenates↗

PubMed2005

Dicarboxylic degradation products of nonylphenol polyethoxylates. Determination and structural elucidation in water samples by solid-phase extraction and gas chromatography-mass spectrometry after methylation.

A reliable method combining solid-phase extraction, derivatization and gas chromatography-chemical ionization mass spectrometry (GC-CI-MS) was developed for the measurement, in river and sewage effluent water, of four select model compounds of dicarboxylic metabolites (dm-CA(5-8)P1EC) and other dicarboxylic metabolites (CA(5-8)P1ECs) of nonylphenol polyethoxylates. These selected isomers were referred as dm-CA(5-8)P1ECs because they have an alpha,alpha-dimethyl configuration (expressed as "dm"), five to eight C atoms and a carboxyl group in the alkyl chain, and an ethoxy acetic acid group. The derivatization of terminal carboxyl groups was successful with (trimethylsilyl)diazomethane. The best extraction conditions were obtained using an Oasis HLB cartridge as a sorbent bed and 4 ml of MTBE/methanol (9:1, v/v) elution mixture. The method detection limits of 0.03-0.07 microg/l for dm-CA(5-8)P1ECs were attained in 500 ml pure water. The recovery was then evaluated for pure water, river and sewage effluent water samples. The high recoveries of typically >89% for each isomer indicated the high performance of the method. Although dm-CA(5-8)P1ECs were not detected in the collected water samples, 21 isomers of CA(5-8)P1ECs were identified by CI-MS and the tentative structures of six out of them were elucidated, mainly limited to the branch at alpha-C atom, by studying the EI-mass spectra. The relative concentrations of individual CA(5-8)P1EC metabolites were calculated based on dm-CA(5-8)P1ECs. The results showed that the main degradation on the nonyl chain occurred via the elimination of two carbon-units and the concentrations in Japan were much lower than those in Taiwan and Italy.

Chemical Fractionation↗

PubMed2005

Bioleaching of metal from municipal waste incineration fly ash using a mixed culture of sulfur-oxidizing and iron-oxidizing bacteria.

We investigated the behavior and characteristics of metal leaching from municipal solid waste incineration (MSWI) fly ash among pure cultures of a sulfur-oxidizing bacterium (SOB) and an iron-oxidizing bacterium (IOB) and a mixed culture. The IOB has a high metal-leaching ability, though its tolerability against the ash addition is low. The SOB might better tolerate an increase in ash addition than the IOB, though metal leaching ability of the SOB is limited. Mixed culture could compensate for these deficiencies, and high metal leachability was exhibited in the 1% ash culture, i.e., 67% and 78% of leachabilities for Cu and Zn, respectively, and 100% for Cr and Cd. Furthermore, comparably high leachabilities such as 42% and 78% for Cu and Zn were observed even in the 3% ash cultures. Characterization of metal leaching by the mixed culture revealed that the acidic and oxidizing condition had remained stable thorough the experimental period. Ferric iron remained in the mixed culture, and the metal leaching was enhanced by redox mechanisms coupling with the leaching by sulfate. An increase of ferrous iron enhanced the Cr, Cu, and As leaching. The optimum concentration of sulfur existed for As and Cr (5 gl(-1)) and Cu (2 gl(-1)). The presence of the degradable and non-degradable organic compound that must be existed in the natural environment or waste landfills made no significant change in the leachability of metals other than Zn. These results suggested that bioleaching using a mixed culture of SOB and IOB is a promising technology for recovering the valuable metals from MSWI fly ash.

Acidithiobacillus thiooxidans↗

PubMed2005

Acid hydrolysis and quantitative determination of total hexosamines of an exopolysaccharide produced by Citrobacter sp.

During the hydrolysis of an exopolysaccharide (EPS) produced by Citrobacter sp., the maximum liberation of hexosamine was obtained with 6 M HCl at 115 degrees C in an autoclave for 1 h. The glycosidic bond energy and degree of acetylation of the hexosamine in EPS were approximately 77 kJ mol(-1) and 61%, respectively. Thermal destruction of the hexosamines and the effect of salt on the hexosamine determination could be minimized under the optimized hydrolytic conditions. Using a modified Elson-Morgan method, maximum total hexosamine concentration was determined to be 3.2 g l(-1) (29% of crude EPS) after 96 h of fed-batch culture.

Acids↗

PubMed2005

Arsenic extraction from solid phase using a dissimilatory arsenate-reducing bacterium.

We investigated the feasibility of a novel bioremedial strategy for arsenic-contaminated soil using a dissimilatory arsenate-reducing bacterium (DARB), Bacillus sp. SF-1. SF-1 was able to effectively extract arsenic from various arsenic-laden solids, via the reduction of solid-phase arsenate to arsenite, which is much less adsorptive than arsenate. The strain can be an easy-to-handle, and cost-effective bioremedial agent.

Arsenates↗

PubMed2005

Potential of predominant activated sludge bacteria as recipients in conjugative plasmid transfer.

We investigated the possibility of conjugative plasmid transfer to the predominant bacteria in activated sludge and the factors influencing the transfer frequency in the activated sludge process. We performed conjugative transfers of a self-transmissible, broad-host-range plasmid RP4 from Escherichia coli C600 to activated sludge bacteria by broth mating. Most of the activated sludge bacteria tested could acquire plasmid RP4, although the transfer frequencies varied from 8.8 x 10(-7) to 1.3 x 10(-2) transconjugants per recipient. The transfer frequencies in several strains were similar to, or higher than, that in intraspecific transfer to E. coli HB101. Matings under various environmental conditions showed that factors relevant to physiological activity, such as temperature and nutrient conditions, seemed to affect the transfer frequency. In addition, conjugative transfer was detected even in filtered raw and treated wastewaters. Thus, the predominant activated sludge bacteria seem to have sufficient potential as recipients in conjugative plasmid transfer under the conditions likely to occur in the activated sludge process. Transfer frequency was reduced by agitation in the presence of suspended solid. This may suggest that conjugative plasmid transfer is physically inhibited in aeration tanks.

Cell Culture Techniques↗

PubMed2005

Optimal turning method of composting regarding hygienic safety.

The new turning method was proposed and verified its effectiveness to pathogens by laboratory scale experiments. Considering the results obtained from the previous studies, it could be said that turning of a composting pile was essential in terms of hygienic aspects but the number of turning should be minimized. Effectiveness of inactivation was estimated for each composting run. From this estimation, turning by layers, which is different from conventional turning that mixes compost pile entirely, was proposed and investigated its performance by experiments. Composting operations with static pile method, complete mix (conventional) turning method, and proposed turning (layer turning) method were done and their effectiveness on inactivation of indicator microorganism was evaluated and compared. As results, the conventional turning method was not a proper method in terms of pathogen inactivation, whereas, the proposed turning method showed an excellent performance and should be employed in a composting operation.

Bacteria↗

PubMed2004

Dicarboxylic degradation products of nonylphenol polyethoxylates: synthesis and identification by gas chromatography-mass spectrometry using electron and chemical ionization modes.

The synthesis, mass spectra and detectability of four selected dicarboxylic degradation products (CAPECs) of nonylphenol polyethoxylates (NPEOs) are reported. The selected isomers have an alpha,alpha-dimethyl configuration (expressed as "dm" in their abbreviation), five to eight C atoms and a carboxyl group in the alkyl chain, and a carboxymethoxy acid group (dm-CA5-8P1ECs). The synthesis was successfully accomplished via a reaction sequence that started from anisole. After trimethylsilylation with N,O-bis(trimethylsilyl)acetamide or methylation with (trimethylsilyl)diazomethane, the derivatives of the dm-CA5-8P1ECs were subjected to a GC-electron ionization (EI)-MS and GC-isobutane chemical ionization (CI)-MS. In EI-MS, ion peaks at m/z = 265 and 207, corresponding to the alpha,alpha-dimethyl structures via the benzyl cleavage of carboxyalkyl chain, were the most significant ions of the trimethylsilyl and methyl derivatives, respectively. In CI-MS, the main ion peaks of dm-CA5-, dm-CA6-, dm-CA7-, and dm-CA8P1EC after methylation were at m/z= 129, 143, 157, and 171, respectively, corresponding to the loss of methyl phenoxyacetate from [M+ H]+; meanwhile significant peaks were detected at 321, 335, 349, and 363, corresponding to the loss of the trimethylsilanol after trimethylsilylation. The potential for the identification and quantification of individual branched carboxyalkyl isomeric mixtures of CA5-, CA6-, CA7-, and CA8P1EC metabolites based on corresponding dm-CA5-8P1ECs revealed the advantage of the GC-CI-MS although the detection limits in CI were clearly higher than those in EI.

Dicarboxylic Acids↗

PubMed2004

Development of enzyme-linked immunosorbent assay for detection of alkylphenol polyethoxylates and their biodegradation products.

An enzyme-linked immunosorbent assay (ELISA) was developed for the quantitative analysis of alkylphenol polyethoxylates (APnEOs) and their biodegradation products. To generate a specific monoclonal antibody (mAb) for the ELISA, hybridoma cells were produced by the fusion of mouse myeloma cells and spleen cells from mice immunized with nonylphenol polyethoxylate (NPnEO) derivatives coupled to bovine serum albumin. The developed ELISA showed the detection limits of 16 and 30 microg/L NP10EO when 10% and 60% (v/v) methanol solutions were used as assay diluent. The mAb was shown to be specific to APnEOs and their metabolites, such as short-ethoxy-chain APnEOs and alkylphenoxy carboxylic acids, except for nonylphenol. Moreover, no response was observed with non-APnEO surfactants as well as other compounds structurally similar to APnEOs. The percentage river water recoveries of 85-118% were obtained for 10 microg/L NP10EO fortification after preconcentration by C18 solid-phase extraction. The ELISA was also validated by comparing it with high-performance liquid chromatography for the analysis of APnEOs and their metabolites in river samples; the correlation coefficient between the values obtained by these assays was 0.96.

Animals↗

PubMed2004

Monitoring behaviour of catabolic genes and change of microbial community structures in seawater microcosms during aromatic compound degradation.

The behaviour of microbial populations responsible for degradation of the aromatic compounds, phenol, benzoate, and salicylate, and changes of microbial community structures in seawater microcosms were analysed quantitatively and qualitatively using MPN-PCR and PCR-DGGE. The purpose of the study was to investigate the ecology of the entire microbial community during bioremediation. Bacterial populations possessing catechol 1,2-dioxygenase (C12O) DNA were evidently the primary degraders of phenol and benzoate, but others possessing catechol 2,3-dioxygenase (C23O) DNA increased to enhance substrate degradation under high-load conditions when the substrates were present for long periods. However, salicylate degradation was evidently facilitated by specific bacterial populations possessing C23O DNA. PCR-DGGE analyses suggested that bacterial populations already relatively dominant in the original microcosm contributed to phenol degradation. Bacteria composing a minor fraction of the original population apparently increased and contributed to benzoate degradation. Bacterial populations possessing C23O DNA were responsible for salicylate degradation, however, and different degrading bacteria were evidently selected for, depending on the initial salicylate concentration. Microbial community structure tended to be simplified by aromatic compound degradation. Thus, microbial monitoring can elucidate the behaviour of bacterial populations responsible for aromatic compound degradation and be used to assess the effects of bioremediation on intact microbial ecosystems.

Bacteria↗

PubMed2004

The degradability of biodegradable plastics in aerobic and anaerobic waste landfill model reactors.

Degradabilities of four kinds of commercial biodegradable plastics (BPs), polyhydroxybutyrate and hydroxyvalerate (PHBV) plastic, polycaprolactone plastic (PCL), blend of starch and polyvinyl alcohol (SPVA) plastic and cellulose acetate (CA) plastic were investigated in waste landfill model reactors that were operated as anaerobically and aerobically. The application of forced aeration to the landfill reactor for supplying aerobic condition could potentially stimulate polymer-degrading microorganisms. However, the individual degradation behavior of BPs under the aerobic condition was completely different. PCL, a chemically synthesized BP, showed film breakage under the both conditions, which may have contributed to a reduction in the waste volume regardless of aerobic or anaerobic conditions. Effective degradation of PHBV plastic was observed in the aerobic condition, though insufficient degradation was observed in the anaerobic condition. But the aeration did not contribute much to accelerate the volume reduction of SPVA plastic and CA plastic. It could be said that the recalcitrant portions of the plastics such as polyvinyl alcohol in SPVA plastic and the highly substituted CA in CA plastic prevented the BP from degradation. These results indicated existence of the great variations in the degradability of BPs in aerobic and anaerobic waste landfills, and suggest that suitable technologies for managing the waste landfill must be combined with utilization of BPs in order to enhance the reduction of waste volume in landfill sites.

Anaerobiosis↗

PubMed2004

Effect of preozonation on improvement of settleability of solid in highly concentrated organic wastewater of Japanese wheat and sweet potato spirit-distillery.

Solid-liquid separation of the wastewater is very difficult because of high viscosity and high SS concentration. In this study, the effectiveness of preozonation on improving the settleability of the solids in wheat and sweet potato wastewaters was investigated using a bench-scale system and pilot treatment system respectively. Results showed that solid-liquid separation in the wheat wastewater was greatly improved by the decanter in the system (SS reduction from 24100 mg/L to 100 mg/L). However, preozonation practice did not show a significant effect on solid-liquid separation of the sweet potato wastewater. Effect of preozonation on solid-liquid separation between wheat and sweet potato wastewater showed different.

Biodegradation, Environmental↗

PubMed2004

Sorption of biodegradation end products of nonylphenol polyethoxylates onto activated sludge.

Nonylphenol(NP), nonylphenoxy acetic acid (NP1EC), nonylphenol monoethoxy acetic acid (NP2EC), nonylphenol monoethoxylate (NP1EO) and nonylphenol diethoxylate (NP2EO) are biodegradation end products (BEPs) of nonionic surfactant nonylphenolpolyethoxylates (NPnEO). In this research, sorption of these compounds onto model activated sludge was characterized. Sorption equilibrium experiments showed that NP, NP1EO and NP2EO reached equilibrium in about 12 h, while equilibrium of NP1EC and NP2EC were reached earlier, in about 4 h. In sorption isotherm experiments, obtained equilibrium data at 28 degrees C fitted well to Freundlich sorption model for all investigated compounds. For NP1EC, in addition to Freundlich, equilibrium data also fitted well to Langmuir model. Linear sorption model was also tried, and equilibrium data of all NP, NP1EO, NP2EO and NP2EC except NP1EC fitted well to this model. Calculated Freundlich coefficient (K(F)) and linear sorption coefficient (K(D)) showed that sorption capacity of the investigated compounds were in order NP > NP2EO > NP1EO > NP1EC approximately NP2EC. For NP, NP1EO and NP2EO, high values of calculated K(F) and K(D) indicated an easy uptake of these compounds from aqueous phase onto activated sludge. Whereas, NP1EC and NP2EC with low values of K(F) and K(D) absorbed weakly to activated sludge and tended to preferably remain in aqueous phase.

Adsorption↗

PubMed2004

Improved borate method for the rapid distinction of glucosamine and galactosamine in an exopolysaccharide produced by Citrobacter sp.

An improved borate method for the quantitative distinction of glucosamine (GlcN) and galactosamine (GalN) in a mixture is presented which is based on the Elson-Morgan method with addition of sodium borate to differentiate colour formation by the two hexosamines. The r2 value and maximum deviation of the method based on calculations derived in this study were 0.9979 and 5.1 %, respectively. Using this method, the GlcN/GalN ratio in an exopolysaccharide (EPS) produced by Citrobacter sp. was found to change with time during the production process, with a maximum value at 9.8:1.

Borates↗

PubMed2003

Simultaneous determination of degradation products of nonylphenol polyethoxylates and their halogenated derivatives by solid-phase extraction and gas chromatography-tandem mass spectrometry after trimethylsilylation.

An efficient method for the simultaneous determination of the degradation products of nonylphenol polyethoxylates (NPnEOs, n = number of ethoxy units), i.e., nonylphenol (NP), NPnEOs (n = 1-3), nonylphenoxy carboxylic acids (NPnECs, n = 1-2, number of ethoxy units plus an acetate) and their halogenated derivatives (XNP, XNP1EO and XNP1EC; X = Br or Cl), in water samples were developed. After trimethylsilylation with N,O-bis(trimethysilyl)acetamide, all the analytes were determined by gas chromatography-tandem mass spectrometry (GC-MS-MS) with electron ionization (EI). The ion peaks of [M - 85]+ of the derivatives were selected as precursor ions and their product ions showing the highest intensities were used for the quantitative analysis. The instrumental detection limits were in the range from 2.1 to 11 pg. The recoveries of the analytes from the water samples were optimized by using solid-phase extraction (SPE). The deuterated reagents of octylphenol, octylphenol monoethoxylate and octylphenoxyacetic acid were used as the surrogates. The method detection limits (500 ml water sample) using C18 SPE were from 2.5 to 18 ng/l. The recoveries from spiked pure water and the environmental water samples were greater than 78%. The method was successfully applied to environmental samples. Remarkably, the concentrations of the halogenated compounds (CINP, CINP1EO and BrNP1EO) were detected at the hundreds of ng/l levels in the Neya river.

Gas Chromatography-Mass Spectrometry↗

PubMed2003

Short- and long-term sorption/desorption of polycyclic aromatic hydrocarbons onto artificial solids: effects of particle and pore sizes and organic matters.

In order to elucidate the effect of nanopores and organic matters on sequestration of contaminants, short- and long-term sorption and desorption of naphthalene and pyrene in seven artificial solid-water systems were studied. Fast sorption occurred in every case; steady states were reached within 1-5h. Sorption constants varied drastically among the seven absorbents, ranging from 1.19 to 5.29 x 10(3) for naphthalene, and from 24.3 to 6.52 x 10(4) for pyrene. Slow sorption continued to take place in some cases, especially on absorbents containing humic matter. Desorption usually took place in two stages, fast and slow, on both unaged and aged absorbents. Irreversibility of desorption occurred for every absorbent except for silica particles modified with octadecyl silyl. Aging led to a reduction of fast desorption fraction due to entrapment of the chemicals into nanopores and partitioning of the chemicals into condensed areas of humic matters, and showed no effect on slow desorption and irreversibility of desorption. On the whole, entrapment into nanopores and partitioning into humic matters are considered to be important for sequestration of contaminants. Irreversibility of desorption is considered to be a more influencing factor than percentage of desorption for describing the extent of sequestration.

Adsorption↗

PubMed2003

Dissimilatory arsenate reduction by a facultative anaerobe, Bacillus sp. strain SF-1.

Bacillus sp. strain SF-1, isolated first as a selenate-reducing bacterium, was characterized as a novel arsenate-reducing bacterium. Strain SF-1 rapidly reduced 10 mM levels of arsenate to arsenite with concomitant cell growth and lactate oxidation under anoxic conditions, indicating that arsenate can act as the terminal electron acceptor for anaerobic respiration (dissimilatory arsenate reduction). Strain SF-1 can use various organic compounds including synthetic sewage mainly composed of peptone and meat extract as the electron donors for arsenate reduction. Although strain SF-1 can grow aerobically, which is very rare for dissimilatory arsenate-reducing bacteria, the presence of oxygen inhibited the arsenate reduction. On the other hand, the presence of nitrate or selenate, which can support the growth of strain SF-1 as electron acceptors, did not significantly inhibit the arsenate reduction. Arsenate-reducing activity, that is, arsenate reductase, was exhibited in strain SF-1 only when grown on arsenate, but the enzyme could not reduce other oxyanions including nitrate and selenate. It was presumed that arsenate reduction was carried out by an enzyme system separate from those of nitrate and selenate reduction, and the arsenate reductase was inducible and specific for arsenate. These results suggest that strain SF-1 may be utilized for extracting arsenic from contaminated soil for the purpose of bioremediation.

Journal Article↗

PubMed2002

Laboratory-scale continuous reactor for soluble selenium removal using selenate-reducing bacterium, Bacillus sp. SF-1.

A model continuous flow bioreactor (volume 0.5 L) was constructed for removing toxic soluble selenium (selenate/selenite) of high concentrations using a selenate-reducing bacterium, Bacillus sp. SF-1, which transforms selenate into elemental selenium via selenite for anaerobic respiration. Model wastewater contained 41.8 mg-Se/L selenate and excess lactate as the carbon and energy source; the bioreactor was operated as an anoxic, completely mixed chemostat with cell retention time between 2.2-95.2 h. At short cell retention times selenate was removed by the bioreactor, but accumulation of selenite was observed. At long cell retention times soluble selenium, both selenate and selenite, was successfully reduced into nontoxic elemental selenium. A simple mathematical model is proposed to evaluate Se reduction ability of strain SF-1. First-order kinetic constants for selenate and selenite reduction were estimated to be 2.9 x 10(-11) L/cells/h and 5.5 x 10(-13) L/cells/h, respectively. The yield of the bacterial cells by selenate reduction was estimated to be 2.2 x 10(9) cells/mg-Se.

Bacillus↗