Biomedical subjects

Milan Stedrý

Publications and source records attributed to Milan Stedrý.

4 recordsLinked to original sources

PubMed2006

Eigenmobilities in background electrolytes for CZE. V. Intensity (amplitudes) of system peaks.

We present a mathematical model of CZE based on the concept of eigenmobilities - the eigenvalues of matrix M tied to the linearized governing equations of electromigration, and the spectral decomposition of matrix M into matrices of amplitudes P(j). Any peak in an electropherogram, regardless of whether it is an analyte peak or a system peak (system zone), is matched with its matrix P(j). This enables calculation of the peak parameters, such as the transfer ratio and the molar conductivity detection response (which give the indirect detection signal and the conductivity detection signal, respectively), when the initial disturbance caused by the injection of the sample is known. We also introduce new quantities, such as the generalized transfer ratio and the conductivity response of system zones, and show how the amplitude (intensity, area) of the analyte peaks and the system peaks can be calculated. We offer a free software, PeakMaster (http://www.natur.cuni.cz/gas), which yields this information in a user-friendly way.

Acetic Acid↗

PubMed2004

Eigenmobilities in background electrolytes for capillary zone electrophoresis: IV. Computer program PeakMaster.

We are introducing a computer implementation of the mathematical model of zone electrophoresis (CZE) described in Stedry, M., Jaros, M., Hruska, V., Gas, B., Electrophoresis 2004, 25, 3071-3079 program PeakMaster. The computer model calculates eigenmobilities, which are the eigenvalues of the matrix tied to the linearized continuity equations, and which are responsible for the presence of system eigenzones (system zones, system peaks). The model also calculates other parameters of the background electrolyte (BGE)-pH, conductivity, buffer capacity, ionic strength, etc., and parameters of the separated analytes--effective mobility, transfer ratio, molar conductivity detection response, and relative velocity slope. This allows the assessment of the indirect detection, conductivity detection and peak broadening (peak distortion) due to electromigration dispersion. The computer model requires the input of the BGE composition, the list of analytes to be separated, and the system instrumental configuration. The output parameters of the model are directly comparable with experiments; the model also simulates electropherograms in a user-friendly way. We demonstrate a successful application of PeakMaster for inspection of BGEs having no stationary injection zone.

Computer Simulation↗

PubMed2003

Eigenmobilities in background electrolytes for capillary zone electrophoresis: II. Eigenpeaks in univalent weak electrolytes.

We analyze in detail a mathematical model of capillary zone electrophoresis (CZE) based on the conception of eigenmobilities, which are eigenvalues of the matrix tied to the linearized continuity equations. Our model considers CZE systems, where constituents are weak electrolytes and where pH of the background electrolyte may reach the full range from 0 to 14. Both hydrogen and hydroxide ions are taken into account in relations for conductivity and electroneutrality. An electrophoretic system with N constituents has N eigenmobilities. We reveal that two of the eigenmobilities have a special meaning as they exist due to the presence of hydrogen ions and hydroxide ions (in water solutions). These two eigenmobilities are responsible for the existence of two corresponding system zones (system peaks). We show that the stationary zone (injection zone, water zone, gap, peak, dip) is in many common background electrolytes composed of these two eigenzones which overlap, due to their very low electrophoretic mobility, into one zone. Other eigenmobilities give rise to system zones originating due to a possible existence of double (or multiple) coconstituents in the background electrolyte. The last group of eigenmobilities is connected with the movement of eigenzones accompanying analytes and enabling their indirect UV or conductivity detection. The model allows assessing experimentally available quantities such as effective mobility of the analyte, molar conductivity detection response, transfer ratio, and relative velocity slope and gives a picture about migration of analytes, their electromigration dispersion and signals obtained in detectors. It allows computer simulation of electropherograms and enables optimization of background electrolytes.

Electric Conductivity↗

PubMed2002

Eigenmobilities in background electrolytes for capillary zone electrophoresis. I. System eigenpeaks and resonance in systems with strong electrolytes.

A background electrolyte system for capillary zone electrophoresis which is composed of three strong univalent ionic constituents is investigated. The ion 1 is considered as a counter-ion and two ions, 2 and 3, are considered as co-ions in relation to the analyte ion 4. We investigate the linearized model of electromigration in such a system and calculate the eigenvalues of a corresponding matrix. The model is formulated in such a way that the eigenvalues of the system are certain mobilities, which we call eigenmobilites, which characterize specific features of the electtrophoretic migration. One of the eigenmobilities is the system eigenmobility u(s) causing the rise of the system peak, called here the system eigenpeak. A situation when the analyte has the same mobility as the system eigenmobility, u(4) = u(s), is analyzed in detail. We show that it leads to the resonance-the mutual jump in the concentration profile of both co-ions, 2 and 3, has a shape of the spatial derivation of the originally sampled analyte profile and, moreover, it grows linearly with time. After a sufficiently long time it can be "amplified" to any value. The resonance has then a great impact on signals of indirect detection methods, like indirect UV detection or conductivity detection. In the framework of the linearized model the relative velocity slope S(x), a measure of electromigration dispersion, is expressed as S(x) = F(u(1) + u(4))(u(2) - u(4))(u(3) - u(4))/[u(4)(u(s) - u(4))], where u(i) is the mobility of the ith ion and F is the Faraday constant. As in practice the concentration of the analyte is not infinitely small and has a certain finite value, the analyte will be at the resonance severely dispersed to a much broader spatial interval. When a specific detector is used, the signal of such an analyte can apparently be missed without any notice.

Electrolytes↗