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Monica K Hurdal

Publications and source records attributed to Monica K Hurdal.

3 recordsLinked to original sources

Estimating linear cortical magnification in human primary visual cortex via dynamic programming.

Human primary visual cortex is organized retinotopically, with adjacent locations in cortex representing adjacent locations on the retina. The spatial sampling in cortex is highly nonuniform: the amount of cortex devoted to a unit area of retina decreases with increasing retinal eccentricity. This sampling property can be quantified by the linear cortical magnification factor, which is expressed in terms of millimeters of cortex per degree of visual angle. In this paper, we present a new method using dynamic programming and fMRI retinotopic eccentricity mapping to estimate the linear cortical magnification factor in human primary visual cortex (V1). We localized cortical activity while subjects viewed each of seven stationary contrast- reversing radial checkerboard rings of equal thickness that tiled the visual field from 1.62 to 12.96 degrees of eccentricity. Imaging data from all epochs of each ring were contrasted with data from fixation epochs on a subject-by-subject basis. The resulting t statistic maps were then superimposed on a local coordinate system constructed from the gray/white matter boundary surface of each individual subject's occipital lobe, separately for each ring. Smoothed maps of functional activity on the cortical surface were constructed using orthonormal bases of the Laplace-Beltrami operator that incorporate the geometry of the cortical surface. This allowed us to stably track the ridge of maximum activation due to each ring via dynamic programming optimization over all possible paths on the cortical surface. We estimated the linear cortical magnification factor by calculating geodesic distances between activation ridges on the cortical surface in a population of five normal subjects. The reliability of these estimates was assessed by comparing results based on data from one quadrant to those based on data from the full hemifield along with a split-half reliability analysis.

Brain Mapping↗

Quantitative evaluation of three cortical surface flattening methods.

During the past decade, several computational approaches have been proposed for the task of mapping highly convoluted surfaces of the human brain to simpler geometric objects such as a sphere or a topological disc. We report the results of a quantitative comparison of FreeSurfer, CirclePack, and LSCM with respect to measurements of geometric distortion and computational speed. Our results indicate that FreeSurfer performs best with respect to a global measurement of metric distortion, whereas LSCM performs best with respect to angular distortion and best in all but one case with a local measurement of metric distortion. FreeSurfer provides more homogeneous distribution of metric distortion across the whole cortex than CirclePack and LSCM. LSCM is the most computationally efficient algorithm for generating spherical maps, while CirclePack is extremely fast for generating planar maps from patches.

Algorithms↗

Cortical cartography using the discrete conformal approach of circle packings.

Cortical flattening algorithms are becoming more widely used to assist in visualizing the convoluted cortical gray matter sheet of the brain. Metric-based approaches are the most common but suffer from high distortions. Conformal, or angle-based algorithms, are supported by a comprehensive mathematical theory. The conformal approach that uses circle packings is versatile in the manipulation and display of results. In addition, it offers some new and interesting metrics that may be useful in neuroscientific analysis and are not available through numerical partial differential equation conformal methods. In this paper, we begin with a brief description of cortical "flat" mapping, from data acquisition to map displays, including a brief review of past flat mapping approaches. We then describe the mathematics of conformal geometry and key elements of conformal mapping. We introduce the mechanics of circle packing and discuss its connections with conformal geometry. Using a triangulated surface representing a cortical hemisphere, we illustrate several manipulations available using circle packing methods and describe the associated "ensemble conformal features" (ECFs). We conclude by discussing current and potential uses of conformal methods in neuroscience and computational anatomy.

Algorithms↗