Biomedical subjects

N Grønbech-Jensen

Publications and source records attributed to N Grønbech-Jensen.

6 recordsLinked to original sources

PubMed2004

Microwave-induced thermal escape in Josephson junctions.

We investigate, by experiments and numerical simulations, thermal activation processes of Josephson tunnel junctions in the presence of microwave radiation. When the applied signal resonates with the Josephson plasma frequency oscillations, the switching current may become multivalued in a temperature range far exceeding the classical to quantum crossover temperature. Plots of the switching currents traced as a function of the applied signal frequency show very good agreement with the functional forms expected from Josephson plasma frequency dependencies on the bias current. Throughout, numerical simulations of the corresponding thermally driven classical Josephson junction model show very good agreement with the experimental data.

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PubMed2002

Effective temperature in driven vortex lattices with random pinning.

We study numerically correlation and response functions in nonequilibrium driven vortex lattices with random pinning. From a generalized fluctuation-dissipation relation, we calculate an effective transverse temperature in the fluid moving phase. We find that the effective temperature decreases with increasing driving force and becomes equal to the equilibrium melting temperature when the dynamic transverse freezing occurs. We also discuss how the effective temperature can be measured experimentally from a generalized Kubo formula.

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PubMed2001

Moving Wigner glasses and smectics: dynamics of disordered Wigner crystals.

We examine the dynamics of driven classical Wigner solids interacting with quenched disorder from charged impurities. For strong disorder, the initial motion is plastic, in the form of crossing winding channels. For increasing drive, there is a reordering into a moving Wigner smectic with the electrons moving in separate 1D channels. These different dynamic phases can be related to the conduction noise and I(V) curves. For strong disorder, we show criticality in the voltage onset just above depinning. We obtain the dynamic phase diagram for driven Wigner solids and demonstrate a finite threshold of force for transverse sliding, recently observed experimentally.

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PubMed2001

Mode locking in ac-driven vortex lattices with random pinning.

We find mode-locking steps in simulated current-voltage characteristics of ac-driven vortex lattices with random pinning. For low frequencies there is mode locking above a finite ac force amplitude, while for large frequencies there is mode locking for any small ac force. This is correlated with the nature of temporal order in the different regimes in the absence of ac drive. The mode-locked state is a frozen solid pinned in the moving reference of frame, and the depinning from the step shows plastic flow and hysteresis.

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PubMed2000

Static and dynamic coupling transitions of vortex lattices in disordered anisotropic superconductors.

We use three-dimensional molecular dynamics simulations of magnetically interacting pancake vortices to study vortex matter in disordered, highly anisotropic materials such as BSCCO. We observe a sharp 3D-2D transition from vortex lines to decoupled pancakes as a function of relative interlayer coupling strength, with an accompanying large increase in the critical current reminiscent of a second peak effect. We find that decoupled pancakes, when driven, simultaneously recouple and order into a crystalline-like state at high drives. We construct a dynamic phase diagram and show that the dynamic recoupling transition is associated with a double peak in dV/dI.

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PubMed1997

Highly constrained multiple-copy refinement of protein crystal structures.

In the course of refining atomic protein structures, one often encounters difficulty with molecules that are unusually flexible or otherwise disordered. We approach the problem by combining two relatively recent developments: simultaneous refinement of multiple protein conformations and highly constrained refinement. A constrained Langevin dynamics refinement is tested on two proteins: neurotrophin-3 and glutamine synthetase. The method produces closer agreement between the calculated and observed scattering amplitudes than standard, single-copy, Gaussian atomic displacement parameter refinement. This is accomplished without significantly increasing the number of fitting parameters in the model. These results suggest that loop motion in proteins within a crystal lattice can be extensive and that it is poorly modeled by isotropic Gaussian distributions for each atom.

Animals↗