PubMed Health⌕ Search

Biomedical subjects

N K Neerchal

Publications and source records attributed to N K Neerchal.

2 recordsLinked to original sources

Comparison of models to identify lame cows based on gait and lesion scores, and limb movement variables.

Bovine lameness results in pain and suffering in cattle and economic loss for producers. A system for automatically detecting lame cows was developed recently that measures vertical force components attributable to individual limbs. These measurements can be used to calculate a number of limb movement variables. The objective of this investigation was to explore whether gait scores, lesion scores, or combined gait and lesion scores were more effectively captured by a set of 5 limb movement variables. A set of 700 hind limb examinations was used to create gait-based, lesion-based, and combined (gait- and lesion-based) models. Logistic regression models were constructed using 1, 2, or 3 d of measurements. Resulting models were tested on cows not used in modeling. The accuracy of lesion-score models was superior to that of gait-score models; lesion-based models generated greater values of areas under the receiving operating characteristic curves (range 0.75 to 0.84) and lower mean-squared errors (0.13 to 0.16) compared with corresponding values for the gait-based models (0.63 to 0.73 and 0.26 to 0.31 for receiving operating characteristic and mean-squared errors, respectively). These results indicate that further model development and investigation could generate automated and objective methods of lameness detection in dairy cattle.

Animals↗

Clustered binary logistic regression in teratology data using a finite mixture distribution.

The beta-binomial distribution introduced by Skellam has been applied in many teratology problems for modelling the litter effect. Recently, Morel and Nagaraj proposed a new distribution for modelling cluster multinomial data when the clustering is believed to be caused by clumped sampling. It turns out that the distribution is a mixture of two binomial distributions and accommodates the estimation of an additional parameter to account for intra-litter effect. The new distribution arises from a cluster mechanism in which some individuals within a cluster exhibit the same behaviour while the remaining individuals from the cluster react independently of each other. Such a mechanism is a natural model in teratology problems, where typically a genetic trait is passed with a certain probability to the foetuses of the same litter. In this article, we use the new distribution to model binary responses with logistic regression. We analyse data from a teratology experiment to demonstrate that the new model provides a useful addition to current methodology. The experiment investigates the synergistic effect of the anticonvulsant phenytoin and trichloropopene oxide on the prenatal development of inbred mice. In a simulation study we investigate the type I error rate and the power of the maximum likelihood ratio test when the data follow a finite mixture distribution.

Animals↗