Biomedical subjects
P Shears
Publications and source records attributed to P Shears.
Community-acquired infections among children in an urban environment: a 2-year prospective study in Liverpool, U.K.
Community-acquired infections are an important cause of admission of children to hospital. We have made a 2-year prospective study of 1,599 children admitted with infection to the Royal Liverpool Children's Hospital in order to determine the pattern of infections, their seasonal distribution and the role of the laboratory in isolating causative agents. Respiratory infections (32% cases) and gastroenteritis (28% cases) were the principal causes of admission. Of all admissions, 64% were children aged less than 1 year. Appropriate specimens were obtained and/or investigations made of 48% cases. Overall, a causative agent was determined in 21% cases. Individual pathogens showed marked seasonality. Respiratory syncytial virus, rotavirus and Shigella species were found more often in the winter months, while Salmonella species and adenovirus infections were most common in the summer. The results provide local data that is relevant to both public health and hospital planning. They also emphasise the need for continuing surveillance of community-acquired infections.
Water sources and environmental transmission of multiply resistant enteric bacteria in rural Bangladesh.
The role of different water sources in the spread of multiply resistant enteric bacteria was investigated in rural Bangladesh. The prevalence of resistance to commonly used antimicrobial agents in the faecal flora of village children and the water quality and prevalence of resistance in village water sources were studied. Most of the children studied (81%) had multiply resistant faecal coliform bacteria, i.e. bacteria resistant to at least three antimicrobials. Although tubewells provided water with low faecal coliform counts, 62% of household storage pots contained water with moderate to high counts. Most of the storage pots (76%) and each of the river and pond sites tested contained multiply resistant isolates. Contamination of water within the household, and the widespread distribution of resistant coliforms in the environment, contribute to the high prevalence of multiply resistant enteric flora in the community. These findings are of importance in understanding the spread of multiply resistant enteric pathogens.
A pseudo outbreak of tuberculosis.
Three cases of suspected tuberculosis were diagnosed over a ten day period at an oncology unit. Case finding was carried out and six further cases were diagnosed. However, doubts were raised about these diagnoses and a review of the outbreak investigation was carried out. Investigation of laboratory procedures found that the 'outbreak' was likely to be due to a contaminated phenol red solution. This incident highlights the importance of a critical evaluation of outbreak investigations, and the need for close collaboration between clinicians, epidemiologists and laboratory staff.
Genomic characterization of rotavirus strains obtained from hospitalized children with diarrhoea in Bangladesh.
Faecal samples were obtained from 111 children hospitalized with acute watery gastroenteritis in a children's hospital in Bangladesh from January to December, 1989. Rotavirus was detected as the aetiologic agent in 35 (32%) of these patients. The electrophoretic pattern of ds-RNA extracted from the rotaviruses showed 11 different migration patterns (six short and five long), as well as some short and long mixed profiles. All four major G serotypes were identified by amplification of a segment of the gene for VP7 using the polymerase chain reaction. A specific serotype could be assigned in 32 (91%) cases. Serotypes G1-G4 accounted for 11%, 37%, 11%, and 23% of isolates respectively. Three (9%) mixed serotypes were identified by this method and were found to be mixtures of serotypes G1 and G4, G2 and G4, and G3 and G4.
Cholera.
Although it is more than a century since the discovery of the vibrio bacillus, cholera remains one of the great epidemic diseases of the tropical world. The epidemiology of cholera is an interaction between the biological and ecological properties of Vibrio cholerae and the complex patterns of human behaviour in tropical environments. The seventh pandemic has spread through all areas of the tropics, and cholera has become endemic in many new areas. The view that cholera was primarily water borne and that humans were the only long-term reservoir has been challenged by the discovery that V. cholerae can survive, often in a dormant state, in aquatic environments. The recent appearance of V. cholerae 0139, a new serotype that causes a disease clinically and epidemiologically indistinct from cholera, has further complicated our understanding of this ancient disease. Developments in the molecular characterization of V. cholerae are providing new information to explain the genetic and epidemiological variations.
Application of pyrolysis mass spectroscopy and SDS-PAGE in the study of the epidemiology of Pseudomonas cepacia in cystic fibrosis.
Representative isolates of Pseudomonas cepacia from 15 cystic fibrosis (CF) patients attending the Respiratory Unit of Alder Hey Childrens' Hospital were investigated by SDS-PAGE of whole-cell polypeptides and by pyrolysis mass spectroscopy (PMS). SDS-PAGE was less discriminatory than PMS. Eleven isolates were indistinguishable by PMS and considered to represent re-isolates of an endemic strain; four isolates were distinct from this group, and from one another. P. cepacia was first isolated on the unit in July 1989 from a patient who had attended a UK selection meeting for a Canadian CF camp. A ward and outpatient segregation policy was introduced, but colonisation of further patients occurred. In August 1991, the Adult CF Association recommended that all social activities involving colonised patients should cease. This, and an increased awareness amongst older CF patients of the risks of person-to-person transmission, was associated with a marked decline in new cases. Social activity and hospital admissions were compared for colonised patients during the year before colonisation with P. cepacia, and matched patients who did not acquire the endemic strain. This showed a significantly higher attendance at CF social events for colonised patients, but no significant association between colonisation and hospital admission. These results are strong indirect evidence that transmission of P. cepacia occurs through social contact outside the hospital environment.
Effect of pH and CO2 on in vitro susceptibility of Pseudomonas cepacia to beta-lactams.
Inhibition of Pseudomonas cepacia (but not Pseudomonas aeruginosa) by beta-lactams was decreased in 5% CO2 in air compared with air alone. The effect of CO2 and pH (range, 6.0 to 8.0) on beta-lactam susceptibility, beta-lactamase expression, and outer membrane proteins was studied in isolates recovered from the sputum of children with cystic fibrosis. Incubation in 5% CO2 decreased the activity of piperacillin, piperacillin/tazobactam, and ceftazidime, although isolates were still clinically sensitive (minimum inhibitory concentrations < 16 mg/L). Cefpirome activity was markedly decreased from a minimum inhibitory concentration of 2.0 to greater than 64 mg/L. On highly buffered 3-(N-morpholino)-propane sulfonic acid media, beta-lactam susceptibility was eliminated at pH greater 7.5. A 2- to 13-fold increase in beta-lactamase activity was demonstrated after growth in 5% CO2 compared with basal aerobic levels for 13 of 15 clinical isolates. beta-Lactamase activity did not vary significantly with pH. Addition of imipenem to media (2.0 mg/L) resulted in hyperproduction of beta-lactamase (180-fold). Isoelectric points varied with cultural conditions, and all beta-lactamases detected were inhibited by clavulanate and tazobactam. Significant hydrolysis of piperacillin and ceftazidime could not be demonstrated. A 36-kD porin was present at all pH tested. Thus, our strains of Pseudomonas cepacia were markedly affected by cultural conditions not normally used in standardized susceptibility tests. However, such conditions may be encountered in the pathologically altered infected lung in cystic fibrosis.
Cryptosporidium in Khartoum, Sudan.
Diarrhoea caused by the protozoan parasite Cryptosporidium has been shown in several tropical countries to be an important health problem, particularly in children. Although infection is often associated with contact with animals, it may also occur through person to person transmission and via contaminated water or food. We have undertaken a cross sectional study to determine the prevalence of Cryptosporidium in children with diarrhoea and in their family contacts, and also investigated its occurrence in adult food handlers. Sixteen of 100 children with diarrhoea and none of the controls, were positive for Cryptosporidium. In addition, seven children had one or more sibs with diarrhoea who also excreted Cryptosporidium. None of the food handlers or asymptomatic children were positive. The results confirm earlier findings that Cryptosporidium is an important cause of diarrhoea in children in Sudan, and suggest that intrafamilial spread occurs.
The prevalence and genetics of resistance to commonly used antimicrobial agents in faecal Enterobacteriaceae from children in Bangladesh.
The present study was undertaken to investigate the occurrence of antibiotic resistance in enteric flora in 64 children in rural Bangladesh over a 12-month period. The antibiotic resistance pattern of the isolates varied throughout the year and multiple resistance was highest during the post monsoon period. Seventy-three percent of children had isolates resistant to more than three antibiotics throughout the year. Resistance to streptomycin was highest (78%), followed closely by ampicillin (72%). Of 82 multiply resistant isolates, plasmid DNA was demonstrated in 75%. Plasmid sizes ranged between 3.7 and 110 MDa, the commonest plasmids were of 70, 98 and 110 MDa. Complete or partial resistance was transferred by conjugation from 52% of the isolates, most frequently by single plasmids. The commonest plasmid incompatibility group was F11-A (46%) followed by incompatibility group P (22%). Plasmids of molecular weight 98 MDa most often hybridized with F11-A probes and those of 110 MDa with H11 probes. Plasmids from 10 transconjugants were digested with restriction enzymes and digest patterns demonstrated the presence of common plasmids. The findings show that there is a diverse, and mobile, genetic pool of resistance genes in this rural community. This genetic reservoir is potentially transferable to enteric pathogens, with major implications for public health and diarrhoeal disease control.
A review of bacterial resistance to antimicrobial agents in tropical countries.
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A study of bacterial meningitis in Kumasi, Ghana.
A prospective study of acute bacterial meningitis in infants and children in Kumasi, Ghana identified 69 cases by culture or antigen detection. Of these, 50.7% (n = 35) were S. pneumoniae, 34.8% (n = 24) N. meningitidis and 14.5% (n = 10) H. influenzae. The mortality for each pathogen was 36.4%, 17.4% and 30%, respectively, showing no significant difference. In pneumococcal meningitis, the most significant clinical factor associated with an increased mortality rate or subsequent neurological sequelae was a lowered level of consciousness at admission (chi 2 = 8.66, d.f. = 1, p = 0.003). Antibiotic susceptibilities were determined in the 40 positive isolates. Six cases of N. meningitidis and two of S. pneumoniae were penicillin-resistant, and there was a single case of chloramphenicol-resistant S. pneumoniae.
Epidemiology and infection in famine and disasters.
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The role of laboratory services in disease surveillance and outbreak investigation in disasters.
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Pathogenesis of colonization and infection in a neonatal surgical unit.
Nosocomial infection with aerobic Gram-negative bacilli is a major cause of morbidity and mortality in neonates. Few prospective studies have been undertaken in neonatal surgical units to investigate colonization and infection rates and the pathogenesis of infection. We prospectively studied 40 infants admitted to a neonatal surgical unit. Ninety-eight percent became colonized in throat/intestine with aerobic Gram-negative bacilli. Thirty-five percent developed infections, with wound and surface infections predominant (61%). Ninety-one percent of infections were caused by Gram-negative bacilli or yeasts. Severe infections (septicemia, pneumonia, meningitis) occurred in 13% of infants. The mortality rate was 5%. In all infections, the pathogenesis was found to be endogenous, and in most, three stages were distinguishable. Neonates always acquired potentially pathogenic organisms in throat/intestine (stage 1) before colonization (stage 2) and infection (stage 3) of other systems occurred. Reduction of digestive tract colonization by these potentially pathogenic microorganisms by means of successful selective decontamination may therefore reduce subsequent infection.
Investigation of a latex slide agglutination technique in the diagnosis of pulmonary tuberculosis, in Dhaka, Bangladesh.
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Restriction endonuclease characterization of resistant plasmids in Enterobacteriaceae isolated from children in the Sudan.
The investigation of plasmid similarity is an important component in the surveillance of antimicrobial resistance and in the detection of epidemic plasmids. The use of restriction endonucleases in the classification of transferable, multiply-resistant plasmids from faecal Enterobacteriaceae isolated at the Children's Emergency Hospital, Khartoum was investigated. Twenty-four transconjugant plasmids, coding for 11 different resistance patterns, each of molecular weight 62 MDa, were studied using four restriction enzymes; Pst I, EcoR I, Hind III and Ava II. Fifteen different digest profiles were obtained. Restriction profiles discriminated between plasmids with differing resistance patterns and demonstrated homology of plasmids with common resistance patterns. Restriction endonuclease digest patterns provide a potentially rapid and reproducible method of plasmid classification, that could contribute towards surveillance systems in tropical countries with a high prevalence of antimicrobial resistance.
The Khartoum floods and diarrhoeal diseases.
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