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Pablo Ballester

Publications and source records attributed to Pablo Ballester.

9 recordsLinked to original sources
PubMed2003

Dual binding mode of s-triazine to anions and cations.

Ab initio calculations were performed on complexes between cations and s-triazine, which has a small and positive quadrupole moment. Minimum energy pi-complexes were found between s-triazine and cations. Minimum pi-complexes with anions were previously reported. This ability of s-triazine to form stable complexes with either anions or cations is studied using several theoretical methods. A likely explanation of this duality is the stabilization obtained from the ion-induced polarization. [structure: see text]

Journal Article↗
PubMed2003

Weak C-H/pi interaction participates in the diastereoselectivity of a host-guest complex in the presence of six strong hydrogen bonds.

[structure: see text] We report a study of the interaction between methylmethanetriacetic acid (MMTA) and a tripodal amidopyridine receptor 1, where the geometry of the binding is in part governed by a weak C-H/pi interaction in the presence of six strong N(O)-H.O(N) hydrogen bonds. There are two possible binding geometries for the 1:1 complex 1.MMTA; combining computational and experimental evidence we demonstrate that the endo binding mode is more favorable as the result of a C-H/pi interaction.

Journal Article↗
PubMed2002

Dual binding mode of methylmethanetriacetic Acid to tripodal amidopyridine receptors.

A series of tripodal amidopyridine receptors capable of selective recognition of methylmethanetriacetic acid (MMTA) in organic solvents is described. Intramolecular hydrogen-bonding groups, built into some of the receptors, were designed as preorganization devices. Binding was studied by NMR titration, variable temperature NMR experiments, 2D-NMR, isothermal titration calorimetry, and single-crystal X-ray crystallography. The results reveal that a balancing act between inter- and intramolecular hydrogen-bonding interactions in the complexes governs both the dynamics and the geometry of binding. Receptor 1b (without intramolecular hydrogen-bonding groups) features a simple symmetric MMTA binding geometry with optimal enthalpic interactions. In sharp contrast, receptor 1a (with intramolecular hydrogen-bonding groups) reveals a temperature-dependent dual binding mode where MMTA can bind in two completely different geometries. The two solution binding geometries of 1a.MMTA were unraveled by NMR experiments and correlated to the X-ray structures.

Journal Article↗
PubMed2002

A synthetic receptor for choline and carnitine.

A synthetic receptor is described with the appropriate shape and size for alkylated trimethylammonium ions such as choline and carnitine. The structure features a deep, concave binding site, lined with aromatic walls that provide cation-pi interactions between host and guest. Molecular mechanic calculations suggest that the host's shape is maintained through intermolecular hydrogen bonding with DMSO solvent molecules. The cavity is too small to accommodate larger ions. Choline and carnitine are recognized and bound with high affinity even though no complementary charges are involved in the process.

Carbamates↗
PubMed2002

Predicting experimental complexation-induced changes in (1)H NMR chemical shift for complexes between zinc-porphyrins and amines using the ab initio/GIAO-HF methodology.

Ab initio calculations were carried out on zinc-porphyrins complexed to several amines: N-(3,5-dimethyl-pyridin-4-yl)-formamide, 1,4-diazabiciclo[2.2.2]octane (DABCO), and 1-azabiciclo[2.2.2]octane (quinuclidine). The proton chemical shifts of these complexes were calculated ab initio at the GIAO-HF/6-311G//HF/3-21G level of theory, and the obtained values agree satisfactorily with experimental results. The complexation-induced changes in (1)H NMR chemical shifts correlate well with differences in association constants of several host-guest complexes.

Journal Article↗
PubMed2002

Quantification of aromaticity in oxocarbons: the problem of the fictitious "nonaromatic" reference system.

Despite the extensive research reported in the literature, the concept of aromaticity has eluded rigorous quantification. The main reason for this undesirable reality is the fact that aromaticity is a differential property. While bond orders, atomic charges and electronegativity differences are properties of the molecule under analysis, the aromaticity concept often refers to the difference between some property of the molecule and that of an artificial "nonaromatic" reference system. A rigorous definition of such a reference system is non-existing and therefore constituting the main barrier to obtain a satisfactory quantification of the aromatic concept. Oxocarbon acids and their anions are examples where the criteria of aromaticity that use reference systems are unsuccessful, only NICS criterion gives satisfactory results. Wiberg bond indexes and 17O NMR chemical shifts are also useful to study such compounds.

Journal Article↗