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Patrick Siarry

Publications and source records attributed to Patrick Siarry.

4 recordsLinked to original sources

Robust rigid registration of retinal angiograms through optimization.

Retinal fundus photographs are employed as standard diagnostic tools in ophthalmology. Serial photographs of the flow of fluorescein and indocyanine green (ICG) dye are used to determine the areas of the retinal lesions. For objective measurements of features, the registration of the images is a necessity. In this paper, we employ optimization techniques for registration with the help of 2-parameter translational motion model of retinal angiograms, based on non-linear pre-processing (Wiener filtering and morphological gradient) and computation of the similarity criteria for the alignment of the two gradient images for any given rigid transformation. The optimization methods are effectively employed to minimize the similarity criterion. The presence of noise, the variations in the background and the temporal variation of the fluorescence level pose serious problems in obtaining a robust registration of the retinal images. Moreover, local search strategies are not robust in the case of ICG angiograms, even if one uses a multiresolution approach. The present work makes a systematic comparison of different optimization techniques, namely the minimization method derived from the optical flow formulation, the Nelder-Mead local search and the HCIAC ant colony metaheuristic, each optimizing a similarity criterion for the gradient images. The impact of the resolution and median filtering of gradient image is studied and the robustness of the approaches is tested through experimental studies, performed on macular fluorescein and ICG angiographies. Our proposed optimization techniques have shown interesting results especially for high resolution difficult registration problems. Moreover, this approach seems promising for affine (6-parameter motion model) or elastical registrations.

Algorithms↗

A new vision on the averaging technique for the estimation of non-stationary Brainstem Auditory-Evoked Potentials: application of a metaheuristic method.

The aim of this paper consists in highlighting the use of the averaging technique in some biomedical applications, such as evoked potentials (EP) extraction. We show that this technique, which is generally considered as classical, can be very efficient if the dynamic model of the signal to be estimated is a priori known. Therefore, using an appropriate model and under some specific conditions, one can show that the estimation can be performed efficiently even in case of a very low signal to noise ratio (SNR), which occurs when handling Brainstem Auditory-Evoked Potentials.

Acoustic Stimulation↗

Fast simulated annealing algorithm for BAEP time delay estimation using a reduced order dynamic model.

The extraction of Brainstem Auditory Evoked Potentials (BAEPs), from the EEG background, is of high clinical interest. The present paper can be considered as a continuation of our previous work related to the BAEP estimation in endocochlear pathologies. In our previous published work, we proposed a technique for time delay estimation on the basis of the BAEPs in response to successive stimulations. Put in a different manner, our objective was the estimation of the dynamics of the cochlea that is responsible for the delayed responses. The estimation technique was based on optimization of a non-linear criterion by means of Simulated Annealing Time Delay Estimation (SATDE) algorithm. However, it is well known that such heuristic algorithms are time consuming and largely depend on the number of parameters to be estimated. The present paper demonstrates that modeling the non-stationarity of responses considerably decreases the convergence time to the global minimum. The newly proposed method in this paper, called Fast Simulated Annealing Time Delay Estimation (FSATDE) algorithm, has been validated on both simulated and real signals.

Algorithms↗