Biomedical subjects

Paul W Wright

Publications and source records attributed to Paul W Wright.

3 recordsLinked to original sources

PubMed2004

Identification of probabilistic transcriptional switches in the Ly49 gene cluster: a eukaryotic mechanism for selective gene activation.

Murine natural killer cells selectively express members of the Ly49 family of class I MHC receptors; however, the molecular mechanism controlling probabilistic expression of Ly49 proteins has not been defined. A pair of overlapping, divergent promoters discovered in the Ly49g gene functions as a molecular switch that can produce a forward transcript containing the coding region of the gene (on position) or a noncoding transcript in the opposite direction (off position), and this element maintains transcription in the chosen direction. Competition of C/EBP and TBP transcription factors for overlapping binding sites determines the relative strength of the competing promoters and the probability of transcription in a given direction. Similar elements precede all Ly49 family members, and the relative strength of the forward promoter in each inhibitory Ly49 gene correlates with the percentage of natural killer cells that express a given receptor, supporting a promoter competition model of selective gene activation.

Animals↗

PubMed2003

ePAD, an oocyte and early embryo-abundant peptidylarginine deiminase-like protein that localizes to egg cytoplasmic sheets.

Selected for its high relative abundance, a protein spot of MW approximately 75 kDa, pI 5.5 was cored from a Coomassie-stained two-dimensional gel of proteins from 2850 zona-free metaphase II mouse eggs and analyzed by tandem mass spectrometry (TMS), and novel microsequences were identified that indicated a previously uncharacterized egg protein. A 2.4-kb cDNA was then amplified from a mouse ovarian adapter-ligated cDNA library by RACE-PCR, and a unique 2043-bp open reading frame was defined encoding a 681-amino-acid protein. Comparison of the deduced amino acid sequence with the nonredundant database demonstrated that the protein was approximately 40% identical to the calcium-dependent peptidylarginine deiminase (PAD) enzyme family. Northern blotting, RT-PCR, and in situ hybridization analyses indicated that the protein was abundantly expressed in the ovary, weakly expressed in the testis, and absent from other tissues. Based on the homology with PADs and its oocyte-abundant expression pattern, the protein was designated ePAD, for egg and embryo-abundant peptidylarginine deiminase-like protein. Anti-recombinant ePAD monospecific antibodies localized the molecule to the cytoplasm of oocytes in primordial, primary, secondary, and Graafian follicles in ovarian sections, while no other ovarian cell type was stained. ePAD was also expressed in the immature oocyte, mature egg, and through the blastocyst stage of embryonic development, where expression levels began to decrease. Immunoelectron microscopy localized ePAD to egg cytoplasmic sheets, a unique keratin-containing intermediate filament structure found only in mammalian eggs and in early embryos, and known to undergo reorganization at critical stages of development. Previous reports that PAD-mediated deimination of epithelial cell keratin results in cytoskeletal remodeling suggest a possible role for ePAD in cytoskeletal reorganization in the egg and early embryo.

Amino Acid Sequence↗

PubMed2002

Oolemmal proteomics.

Fertilization is defined as a series of gametic interactions in which capacitated sperm must first penetrate the egg vestments and then bind to and fuse with the egg plasma membrane (oolemma). The molecular basis of sperm-egg binding and fusion has yet to be elucidated due, in part, to how little is known about the array of proteins residing on the oolemma. Proteomics is an emerging area of research that directly evaluates protein expression by resolving, identifying, quantitating, and characterizing proteins utilizing a variety of techniques including high resolution two-dimensional polyacrylamide gel electrophoresis (2D PAGE), tandem mass spectrometry, and computer analysis. Our research group has utilized 2D PAGE to begin building a mouse oocyte proteomic database, with over 500 silver-stained proteins being resolved and digitized to date. Cell-surface labeling with biotin has identified a subset of 80 putative egg surface proteins. Amino acid microsequences from over 30 of the surface-labeled proteins has been obtained by tandem mass spectrometry. Sequences from eight of these proteins do not match any sequences from protein and DNA databanks, indicating that these proteins are novel. Our major current research goal is to clone, characterize, and express the novel proteins that are shown to be ovary-specific and investigate their functional roles in sperm-egg interaction.

Animals↗