Greener media in chemical synthesis and processing.
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Biomedical subjects
Publications and source records attributed to Pedro Cintas.
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Ultrasound, an efficient and virtually innocuous means of activation in synthetic chemistry, has been employed for decades with varied success. Not only can this high-energy input enhance mechanical effects in heterogeneous processes, but it is also known to induce new reactivities leading to the formation of unexpected chemical species. What makes sonochemistry unique is the remarkable phenomenon of cavitation, currently the subject of intense research which has already yielded thought-provoking results. This critical review is aimed at discussing the present status of cavitational chemistry and some of the underlying phenomena, and to highlight some recent applications and trends in organic sonochemistry, especially in combination with other sustainable technologies. (151 references.).
This contribution describes a series of sonochemical cycloadditions involving either cyclopentadiene or 1,3-cyclohexadiene with carbonyl dienophiles in an imidazolium-based ionic liquid as reaction medium. In general, ultrasound does effectively improve these processes in terms of higher yields and/or shorter reaction times when compared with the corresponding silent reactions. Stereoselectivities, however, remain practically unaffected by sonication. The role of ionic liquids under ultrasonic activation is also discussed.
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The chemistry of mesoionic rings, especially their use as masked dipoles, has been a fruitful area of research since the late 1950s. With recent advances in the control of regio- and stereochemistry, the dipolar cycloaddition led to widespread application. In this Account, we illustrate our contribution employing thioisomünchnones, a class of mesoionics that has found use in creating a series of heterocyclic systems hitherto inaccessible by conventional 1,3-dipolar cycloaddition. We also provide some rationalizations from computations and comment on future directions.
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For more than 150 years natural selection has been perceived to be the overwhelming force in evolution. Only in recent decades have we obtained new insights into environmental and physicochemical factors that participate with selection in a synergic way. Far from denying Darwin's theory, such neglected factors put order to the bewildering range of genotypes and morphologies found in living organisms and, more importantly, they place evolution in a planetary context where biology, geology, and chemistry can easily be integrated.
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In the light of recent and controversial findings on spontaneous resolution of racemates and their implications in the origin of homochirality on earth, we present here a detailed review of this important topic. Although spontaneous resolution cannot at this moment be reliably predicted, there has also been considerable progress in crystal structure prediction and, not only thermodynamic factors, but also kinetic ones, play important roles in the efficiency of packing and crystallization. In addition, self-association and supramolecular control phenomena may be identified in cases where spontaneous resolution of enantiomers is actually occurring. While this contribution summarizes our current understanding of this intriguing phenomena, it is hoped that future work on crystalline conglomerates (or homochiral crystals) of prebiotic importance will be of further help to understand the general problem of terrestrial chirogenesis.
What does a Diels-Alder cycloaddition look like? This question is here addressed in the case of the increasingly significant cycloadditions of masked o-benzoquinones (MOBs), which serve as versatile dienes for the construction of complex and functionalized structures. So first, what the mechanism is not: It is not (by and large) a classical, concerted [4 + 2] cycloaddition. Experimental evidence is now supported by sonochemical studies, which were instrumental in elucidating the pathway. Reactions with furans are accelerated and improved under sonication, even when conducted at -10 degrees C. Variation of the acoustic energy, temperature, and solvent composition allows us to optimize the yields and provide insights into the mechanism. Ultrasound does not cause sonochemical switching, as an alternative radical pathway should be ruled out. Results are consistent with a polar mechanism as claimed recently in a theoretical study. Moreover, this also does justice to a series of seminal papers, largely ignored, that gave a clue to the crucial issue of furan regioselectivity based on a nucleophilic addition. Most effects caused by ultrasonic agitation are of mechanochemical nature and suggest the existence of a perfectly stirred reactor with enhanced mass transfer.
A series of highly funtionalized beta-lactams and thiiranes can be generated on treatment of 1,3-thiazolium-4-olates (thioisomünchnones) with aliphatic aldehydes. Although in some cases a variety of products have been obtained, the present paper now provides a mechanistic rationale to explain the product distribution based on stereoelectronic effects. Thus, ring fragmentation of the initial [3+2] cycloadduct is essentially dictated by the electronic character of the aryl substituent on the nitrogen atom of the parent thioisomünchnone. However, further evolution of such cycloadducts into beta-lactams or thiiranes is governed by steric effects to a large extent. Evidence for such interactions has been obtained by computing PM3-optimized diastereomeric transition structures in the reaction of a thioisomünchnone with a chiral aliphatic aldehyde.
The magnetic deshielding caused by the amido group on CON-CHalpha protons of secondary amides can easily be correlated with DFT-based structures at the B3LYP/6-31G level of theory via a novel algorithm that refines previous models, such as the classical McConnell equation. The shift is given by delta = a + 2.16 cos2(alpha - 35)/d, where alpha denotes the virtual dihedral angle resulting from linking the carbonyl and the alpha-carbons and d is the distance (A) between the shifted proton and the carbonyl oxygen. Notably, in this equation a is a parameter that can be optimized for different solvents, namely, CDCl3, DMSO-d6, and D2O. For the development of these correlations, the preferential conformation of amides is taken from the optimized structures in the gas phase obtained at the DFT level. The deshielding on anti and gauche protons in both rotamers of (Z)-acetamides and E/Z isomers of formamides has been evaluated. This methodology has proved to be highly reliable, allowing us to discard ab initio or DFT conformational arrangements when shifts calculated by the above-mentioned equation differ from the experimental values. Thus, the anti disposition between the CHalpha proton and the N-H bond appears to be the more stable conformation of simple amides. For amides bearing only one proton at Calpha, a local syn minimum can equally be characterized. The rotational barriers around the CON-alkyl bond along with the pyramidalization of the amido group have also been reassessed. As the conformation is taken away from anti or local syn minima, the nonplanarity of the amido group appears to increase.
The reactions of masked ortho-benzoquinones with furan under sonochemical irradiation were studied. Variation of the acoustic energy, temperature, and solvent composition permitted to optimize the yields, and provided insights into the mechanism. While the radical pathway could not be established, a double Michael stepwise pathway seems more probable, as shown by the effect of solvent polarity and the regioselectivity. The sonochemical effect involves most likely a mechanical micromixing, giving evidence to its role even in homogeneous systems.
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A series of carbohydrate-based tetrahydropyridazines are prepared by the hetero-Diels-Alder reaction of the chiral 1,2-diaza-1,3-butadienes 1 and 2 with acrylonitrile. Reactions are regiospecific, and the observed diastereoselection is consistent with a preferred attack to the Re face of the heterodiene unit, as the chiral sugar placed at C4 does largely protect the opposite Si face. The stereochemistry of the major cycloadduct 4 has been firmly established by an X-ray crystallographic study that, in addition, reveals a conformation placing the cyano group in axial orientation. Cycloadducts such as 9 and 11, in which the axial cyano group and the carbohydrate moiety exhibit a cis relationship, undergo a facile E2 elimination that relieves the steric congestion. A detailed computational study is reported to provide better insight into the factors that influence this asymmetric cycloaddition. A DFT study (B3LYP/6-31G) on a reduced model does correctly predict the regiochemistry observed experimentally, while the facial diastereoselection is modeled at a semiempirical (PM3) level on the parent reagents, thereby accounting for the steric factor provided by the chiral substituent. The calculations also indicate that the axial orientation of the cyano group can be rationalized in terms of a stabilizing anomeric effect.
The present contribution discloses a simple and unexpected acid-catalyzed cleavage of tetrahydrotetrazines leading to 1,2-bis(hydrazones). Incorporation of a chiral fragment derived from carbohydrates enables the rapid preparation of glycosazones, a family of compounds employed by Emil Fischer to elucidate the configuration of sugars. In addition, a mechanistic proposal accounts for experimental observations.
Left-right asymmetry is ubiquitous in nature. Recent studies reveal changes in the energy and growth rate of crystal surfaces to which D or L amino acids bind, with the binding itself being dictated by stereochemical matching. Likewise, oligomerization of amino acids appears to be a chiroselective process that enables the propagation of sequences with defined handedness.[[For a definition of chiroselective self-assembly, see: M. Bolli, R. Micura, A. Eschenmoser, Chem. Biol. 1997, 4, 309-320.]] These results, along with related findings on symmetry breaking and further amplification of asymmetry at a supramolecular level, constitute new insights into the origin of homochirality in living species.
A three-component coupling for the rapid assembly of nitrogenated bicycles has been developed that employs the sequential cycloaddition of nitroalkenes as 4pi components and both an electron-rich vinyl ether and electron-withdrawing alkenes. Given the distinct electronic character of nitroalkenes and the intermediate nitronates, the coupling represents an atom-economy strategy without side products resulting from competitive reactions. Either with a racemic nitroalkene or an enantiopure nitroalkenyl sugar, these processes were regiospecific leading to the formation of bicyclic nitrosoacetals with high facial diastereoselectivity. The stereochemistry of the cycloadducts was assigned by NMR spectroscopic techniques, and those of 2 and 15 were corroborated by X-ray crystallographic analysis. The unmasking of the nitrosoacetal moiety under mild conditions represents a homologation route for higher aldehydo sugars.