Biomedical subjects

Peter Stief

Publications and source records attributed to Peter Stief.

4 recordsLinked to original sources

PubMed2006

High temporal resolution oxygen imaging in bioirrigated sediments.

A technique is presented for temporal characterization of the bioirrigation activity of benthic macrofauna and for quantitative estimation of its effects on the oxygen exchange between the sediment and the overlying water. The technique is based on high temporal resolution (15-30 s) oxygen imaging aided by a planar oxygen optode and can be applied under laboratory and field conditions, both freshwater and marine. It allows direct observation of the complex 2D oxygen dynamics in the sediment around the burrow while the animal dwells undisturbed in its natural environment. The conditions to which the animal is exposed can easily be controlled or manipulated. Chironomus plumosus, widely distributed freshwater insect larvae, were used in a case study. Their bioirrigation activity was divided into a random succession of pumping intervals (duration 5.4 +/- 1.7 min) and rest periods (duration 9.2 +/- 5.8 min). The burrow ventilation resulted in a highly variable volume of the oxygenated sediment surrounding the burrow and the associated sedimentary oxygen uptake rate through the burrow wall (OUB), both changing dramatically within minutes. Their variability was higher in a burrow under construction than around a stationary burrow. The average OUB rate (approximately 0.15 micromol O2 h(-1)), when translated into a time-averaged 02 flux across the burrow wall, constituted approximately 64% of the stationary diffusive oxygen flux measured at the sediment-water interface (approximately0.9 mmol O2 m(-2) h(-1)).

Aerobiosis↗

PubMed2006

The gut microenvironment of sediment-dwelling Chironomus plumosus larvae as characterised with O2, pH, and redox microsensors.

We devised a set-up in which microsensors can be used for characterising the gut microenvironment of aquatic macrofauna. In a small flow cell, we measured microscale gradients through dissected guts (O(2), pH, redox potential [E ( h )]), in the haemolymph (O(2)), and towards the body surface (O(2)) of Chironomus plumosus larvae. The gut microenvironment was compared with the chemical conditions in the lake sediment in which the animals reside and feed. When the dissected guts were incubated at the same nominal O(2) concentration as in haemolymph, the gut content was completely anoxic and had pH and E ( h ) values slightly lower than in the ambient sediment. When the dissected guts were artificially oxygenated, the volumetric O(2)-consumption rates of the gut content were at least 10x higher than in the sediment. Using these potential O(2)-consumption rates in a cylindrical diffusion-reaction model, it was predicted that diffusion of O(2) from the haemolymph to the gut could not oxygenate the gut content under in vivo conditions. Additionally, the potential O(2)-consumption rates were so high that the intake of dissolved O(2) along with feeding could be ruled out to oxygenate the gut content. We conclude that microorganisms present in the gut of C. plumosus cannot exhibit an aerobic metabolism. The presented microsensor technique and the data analysis are applicable to guts of other macrofauna species with cutaneous respiration.

Animals↗

PubMed2006

Anaerobic sulfide oxidation with nitrate by a freshwater Beggiatoa enrichment culture.

A lithotrophic freshwater Beggiatoa strain was enriched in O2-H2S gradient tubes to investigate its ability to oxidize sulfide with NO3- as an alternative electron acceptor. The gradient tubes contained different NO3- concentrations, and the chemotactic response of the Beggiatoa mats was observed. The effects of the Beggiatoa sp. on vertical gradients of O2, H2S, pH, and NO3- were determined with microsensors. The more NO3- that was added to the agar, the deeper the Beggiatoa filaments glided into anoxic agar layers, suggesting that the Beggiatoa sp. used NO3- to oxidize sulfide at depths below the depth that O2 penetrated. In the presence of NO3- Beggiatoa formed thick mats (>8 mm), compared to the thin mats (ca. 0.4 mm) that were formed when no NO3- was added. These thick mats spatially separated O2 and sulfide but not NO3- and sulfide, and therefore NO3- must have served as the electron acceptor for sulfide oxidation. This interpretation is consistent with a fourfold-lower O2 flux and a twofold-higher sulfide flux into the NO3- -exposed mats compared to the fluxes for controls without NO3-. Additionally, a pronounced pH maximum was observed within the Beggiatoa mat; such a pH maximum is known to occur when sulfide is oxidized to S0 with NO3- as the electron acceptor.

Anaerobiosis↗

PubMed2003

In situ distribution and activity of nitrifying bacteria in freshwater sediment.

Nitrification was investigated in a model freshwater sediment by the combined use of microsensors and fluorescence in situ hybridization with rRNA-targeted oligonucleotide probes. In situ nitrification activity was restricted mainly to the upper 2 mm of the sediment and coincided with the maximum abundance of nitrifying bacteria, i.e. 1.5 x 107 cells cm-3 for ammonia-oxidizing Beta-proteobacteria (AOB) and 8.6 x 107 cells cm-3 for Nitrospira-like nitrite-oxidizing bacteria (NOB). Cell numbers of AOB decreased more rapidly with depth than numbers of NOB. For the first time, Nitrospira-like bacteria could be quantified and correlated with in situ nitrite oxidation rates in a sediment. Estimated cell-specific nitrite oxidation rates were 1.2-2.7 fmol NO2- cell-1 h-1.

Bacteria↗