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R E Merrifield

Publications and source records attributed to R E Merrifield.

3 recordsLinked to original sources

Topology of bonding in pi-electron systems.

Delocalization in conjugated pi-electron systems is shown to be closely related to the topological concept of connectivity. A topological bond order is defined as a quantitative measure of the extent to which the subspace of a pair of adjacent atoms approximates a disconnected component of the molecular topological space. The agreement between this measure and molecular-orbital bond orders in the ordering of bond strengths within molecules is near perfect. There is also excellent quantitative agreement between these two measures of bond strength. Bond orders appear to be primarily determined by molecular topology. A new type of intramolecular equivalence relation between bonds, called "coresiduality," emerges from the topological analysis. Two bonds are coresidual if the residues remaining when each pair of adjacent atoms is excised from the molecule are isomorphic. Coresidual bonds have equal bond orders. Coresiduality includes, but is more general than, equivalence due to symmetry.

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Enumeration of structure-sensitive graphical subsets: Theory.

THE NECESSARY MATHEMATICAL MACHINERY IS DEVELOPED FOR ENUMERATION OF THE FOLLOWING TYPES OF SPECIAL SUBSETS OF THE VERTICES OR EDGES OF A GENERAL GRAPH: (i) independent sets, (ii) connected sets, (iii) point and line covers, (iv) externally stable sets, (v) kernels, and (vi) irredundant sets.

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Mathematical description of molecular structure: Molecular topology.

The concepts of the topology of finite point sets are applied to a mathematical description of molecular structure. The combinatorial properties of the "bond topology," which arises naturally from atomic adjacency relationships within a molecule, are investigated in detail. The collection of closed sets, the cotopology, is found to be related to bonding. Combinatorial weights of bonds over the cotopology are defined and explicit expressions for a general molecule are derived. The bond weights are found to parallel molecular orbital bond orders. It is concluded that much of the variation in pi bond orders is topological in origin.

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