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R E Stenkamp

Publications and source records attributed to R E Stenkamp.

47 records · Page 3Linked to original sources
PubMed1985

Influence of solvent accessibility and intermolecular contacts on atomic mobilities in hemerythrins.

Thermal factor parameters (B values) have been compared from the refined crystal structures of the myohemerythrin from Themiste zostericola and of the octameric hemerythrin from Themiste dyscrita. These B values, which are directly related to atomic mobilities, were found to correlate rather closely with the solvent accessible areas within the respective crystals. Although protomeric units of the two molecules have exceptionally similar three-dimensional structures, there are marked differences between the patterns of relative atomic mobilities along the polypeptide chains. The differences correspond to lattice and oligomer contacts. An adjustment of the B values based on the fraction of accessible area occluded by contacts yields values that correlate well between the independent subunits and that should pertain more closely to those for the protomer free in solution.

Animals↗
PubMed1980

Growth-modulating plasma tripeptide may function by facilitating copper uptake into cells.

The plasma tripeptide glycyl-L-lysine (GHL), when added at nanomolar concentrations to a wide group of cultured systems, produces a disparate set of responses ranging from the stimulation of growth and differentiation to outright toxicity. Such diverse actions imply that this tripeptide mediates some basic biochemical function common to many types of cells and organisms. During the isolation of GHL we found the compound to co-isolate through a number of steps with approximately equimolar copper and about 1/5 molar iron. Maximal effects on hepatoma cells (HTC4) were seen when the peptide was added with copper and iron to the growth medium. Structure-function studies revealed that several tripeptides with a histidyl-lysyl linkage were nearly as active as GHL. The association of GHL with copper and a homology similarity between the tripeptide and the copper transport sites on albumin and alpha-fetoprotein, where the cupric atom is bound to a histidyl residue adjacent to a basic residue, suggested that GHL may act as a copper transport factor. We report here that the tripeptide readily forms complexes with copper(II) and enhances the uptake of the metal into cultured hepatoma cells.

Animals↗
PubMed1978

Structure of methemerythrin at 2.8-Angstrom resolution: computer graphics fit of an averaged electron density map.

The crystal structure of methemerythrin from Themiste dyscritum has been determined at 2.8-Angstrom resolution by single isomorphous replacement technique combined with anomalous scattering from a K2HgI4 derivative. Noncrystallographic symmetry relating the four subunits in the asymmetric unit was used to obtain an average electron density map of the hemerythrin monomer, and a computer graphics system was used to fit a polypeptide model to the electron density. The average map was of sufficient quality to locate most of the amino acid side chains and to confirm the assignment of His-25, His-54, Glu-58, His-73, His-77, His-101, Asp-106, and Tyr-109 as the iron ligands. One of the mercury sites in the heavy atom derivative is located between two Cys-9 residues related by a noncrystallographic twofold axis, although no intersubunit disulfide bond is present in the native structure. The residues responsible for the binding of the subunits to form the octamer are identified.

Amino Acids↗
PubMed1976

Structure of the iron complex in methemerythrin.

The coordination of the ligands about the iron atoms in methemerythrin from Themiste dyscritum has been deduced from a 2.8 A resolution electron density map. The complex can be described in terms of two trigonal antiprisms about the pair of iron atoms in each subunit, the antiprisms having one face in common. Ligands at eight of the nine coordination positions are protein side chains, the ninth presumably being water. Comparison of the electron density map for T. dyscritum methemerythrin with the sequence of Phascolopsis gouldii hemerythrin suggests six aromatic side chain ligands (five histidine and one tyrosine) and two nonaromatic side chain ligands. The latter provide atoms at two of the three vertices of the face shared by the two antiprisms, and these along with the presumed water at the third vertex form bridges between the iron atoms of each pair.

Annelida↗