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Biomedical subjects

R I Smith

Publications and source records attributed to R I Smith.

At least 19 recordsLinked to original sources

On the compression mechanism of FeF3.

The structure of FeF3, iron trifluoride, has been studied in the pressure range from ambient to 8.28 GPa by time-of-flight neutron powder diffraction. No structural phase transitions were found within the investigated pressure range, and least-squares refinements of the crystal structures were performed in the space group R3c for all recorded data sets. It was found that volume reduction is achieved through rotation of the FeF6 octahedra, and the Fe-F-Fe bond angle decreases from 152.5 (2) to 134.8 (3) degrees within the investigated pressure range. A small octahedral strain was found to develop during compression, which reflects an elongation of the FeF6 octahedra along the c axis. The zero-pressure bulk modulus Bo and its pressure derivative B'o were determined to be 14 (1) GPa and 12 (1), respectively.

Journal Article↗

Changes in the atmospheric deposition of acidifying compounds in the UK between 1986 and 2001.

Emissions of a precursor of acidity in precipitation, sulphur dioxide (SO2), declined in the UK and the EU (15) by 71% and 72%, respectively, between 1986 and 2001, while nitrous oxide emissions declined by about 40%. Acidity in UK precipitation and the deposition of sulphate in precipitation halved during this period, but reductions were larger in the English Midlands than at the west coast and in high rainfall areas (>2000 mm). There is evidence that the smaller reductions in sulphur deposition in the west and south are due in part to shipping sources of SO2. Reductions in sulphur dry deposition (74%) are larger than in wet deposition (45%), due to changes in the canopy resistance to dry deposition. For reduced nitrogen, there has been a small (10%) reduction in emissions and deposition, while for oxidized nitrogen, a substantial reduction in emissions (40%) occurred but wet deposition of nitrate changed by less than 10%.

Acid Rain↗

The compression mechanism of CrF3.

The structure of CrF3 has been studied in the pressure range from ambient to 9.12 GPa by time-of-flight neutron powder diffraction. Rietveld refinements of the crystal structure were performed in the space group R3 c for all the recorded data sets. It was found that volume reduction is achieved through rotation of the CrF6 octahedra and that the Cr-F-Cr bond angle decreases from 144.80 (7) to 133.9 (4) degrees within the investigated pressure range. Furthermore, a small octahedral strain was found to develop during compression. The octahedral strain reflects an elongation of the CrF6 octahedra along the c-axis direction. The zero-pressure bulk modulus Bo and its pressure derivative Bo' were determined to be Bo = 29.2 (4) GPa and Bo' = 10.1 (3).

Journal Article↗

Ammonia emission and deposition in Scotland and its potential environmental impacts.

The main source of atmospheric ammonia (NH3) in Scotland is livestock agriculture, which accounts for 85% of emissions. The local magnitude of emissions therefore depends on livestock density, type, and management, with major differences occurring in various parts of Scotland. Local differences in agricultural activities therefore result in a wide range of NH3 emissions, ranging from less than 0.2 kg N ha(-1) year(-1) in remote areas of the Scottish Highlands to over 100 kg N ha(-1) year-1 in areas with intensive poultry farming. Scotland can be divided loosely into upland and lowland areas, with NH3 emission being less than and more than 5 kg N ha(-1) year(-1), respectively. Many semi-natural ecosystems in Scotland are vulnerable to nitrogen deposition, including bogs, moorlands, and the woodland ground flora. Because NH3 emissions occur in the rural environment, the local deposition to sensitive ecosystems may be large, making it essential to assess the spatial distribution of NH3 emissions and deposition. A spatial model is applied here to map NH3 emissions and these estimates are applied in atmospheric dispersion and deposition models to estimate atmospheric concentrations of NH3 and NH4+, dry deposition of NH3, and wet deposition of NHx. Although there is a high level of local variability, modelled NH3 concentrations show good agreement with the National Ammonia Monitoring Network, while wet deposition is largest at high altitude sites in the south and west of Scotland. Comparison of the modelled NHx deposition fields with estimated thresholds for environmental effects ("critical loads") shows that thresholds are exceeded across most of lowland Scotland and the Southern Uplands. Only in the cleanest parts of the north and west is nitrogen deposition not a cause for concern. Given that the most intense effects occur within a few kilometres of sources, it is suggested that local spatial abatement policies would be a useful complement to traditional policies that mitigate environmental effects based on emission reduction technologies.

Ammonia↗

No evidence for large-scale proton ordering in Antarctic ice from powder neutron diffraction.

We have examined a sample of 3000 year old Antarctic ice, collected at the Kohnen Station, by time-of-flight powder neutron diffraction to test the hypothesis of Fukazawa et al. [e.g., Ann. Glaciol. 31, 247 (2000)] that such ice may be partially proton ordered. Great care was taken to keep our sample below the proposed ordering temperature (237 K) at all times, but we did not observe any evidence of proton ordering.

Journal Article↗

Influence of nutrient application rate on growth and rooting potential of the West African hardwood Triplochiton scleroxylon.

Effects of stock plant nutrition on growth and subsequent rooting of leafy stem cuttings of the commercially important west African tree Triplochiton scleroxylon K. Schum. were investigated to identify the primary morphological variables influencing adventitious root formation. Potted plants were watered as required with one of four balanced nutrient solutions (0, 15, 63 or 125 mg N l(-1)). Increasing the nutrient supply to stock plants increased growth rate and rate of adventitious root production of subsequently harvested cuttings, but an optimum nutrient regime was not identified. Rooting percentage increased from 27% in cuttings harvested from stock plants receiving a low nutrient supply to 64% for cuttings harvested from stock plants receiving eight times the amount of nutrients extractable from plants under typical field conditions in West Africa. The ability of a cutting to retain its leaf during propagation and the length of the cutting were the primary measured characteristics associated with rooting and accounted for 43% of the variance fitted in the model. The length of the new shoot, total leaf area and within-shoot position (node position) were also significantly associated with rooting. After these characteristics were fitted to the model, the genetic origin (clone) was not statistically significant. We conclude that genetic variation in rooting potential is mediated through variations in morphological and physiological traits, rather than through genetic variation in cell differentiation or related aspects of root initiation.

Malvaceae↗

Real time observation of the hydrothermal crystallization of barium titanate using in situ neutron powder diffraction.

The hydrothermal crystallization of barium titanate, BaTiO3, has been studied in situ by time-resolved powder neutron diffraction methods using the recently developed Oxford/ISIS hydrothermal cell. This technique has allowed the formation of the ferroelectric ceramic to be followed in a noninvasive manner in real time and under genuine reaction conditions. In a first set of experiments, Ba(OD)2-8D2O was reacted with two different titanium sources, either crystalline TiO2 (anatase) or amorphous TiO2-H2O in D2O, at 100-140 degrees C and the reaction studied using the POLARIS time-of-flight neutron powder diffractometer, at the ISIS Facility. In a second series of experiments, the reaction between barium chloride and crystalline TiO2 (anatase) in NaOD/D2O was studied at temperatures between 100 and 200 degrees C and at different deuterioxide concentrations using the constant-wavelength D20 neutron powder diffractometer at the Institut Laue Langevin. Quantitative growth and decay curves were determined from analysis of the integrated intensities of Bragg reflections of starting materials and product phases. In both sets of experiments the rapid dissolution of the barium source was observed, followed by dissolution of the titanium source before the onset of crystallization of barium titanate. Using a nucleation-growth model we are able to simulate the growth curve of barium titanate at three temperatures. Our results indicate the predominance of a homogeneous dissolution-precipitation mechanism for the hydrothermal formation of barium titanate, rather than other possible mechanisms that have been discussed in the literature. Analysis of the line widths of the Bragg reflections in the neutron diffraction data indicates that the particle size of the BaTiO3 product phase prepared from the amorphous TiO2-H2O is smaller than that prepared from crystalline TiO2 (anatase).

Journal Article↗

A spatial analysis of atmospheric ammonia and ammonium in the U.K.

As measures are implemented internationally to reduce SO2 and NOx emissions, attention is falling on the contribution of NH3 emissions to acidification, nitrogen eutrophication, and aerosol formation. In the U.K., a monitoring network has been established to measure the spatial distribution and long-term trends in atmospheric gaseous NH3 and aerosol NH4+. At the same time, an atmospheric chemistry and transport model, FRAME, has been developed with a focus on reduced nitrogen (NHx). The monitoring data are important to evaluate the model, while the model is essential for a more detailed spatial assessment. The national network is established with over 80 sampling locations. Measurements of NH3 and NH4+ (at up to 50 sites) have been made using a new low-cost denuder-filterpack system. Additionally, improved passive sampling methods for NH3 have been applied to explore local variability. The measurements confirm the high spatial variability of NH3 (annual means 0.06 to 11 microg NH3 m(-3)), consistent with its nature as a primary pollutant emitted from ground-level sources, while NH4+, being a slowly formed secondary product, shows much less spatial variability (0.14 to 2.4 mg NH4+ m(-3)). These features are reproduced in the FRAME model, which provides estimates at a 5-km level. Analysis of the underlying NH3 emission inventory shows that sheep emissions may have been underestimated and nonagricultural sources overestimated relative to emissions from cattle. The combination of model and measurements is applied to estimate spatial patterns of dry deposition to different vegetation types. The combined approach provides the basis to assess NHx responses across the U.K. to international emission controls.

Air Pollutants↗

Ozone dose mapping and the utility of models.

In Europe the monitoring of ozone doses to growing crops is based on measurement of AOT40, the annual accumulated excess ozone concentration over a threshold of 40 ppb, aggregated over the growing season. To show the extent of ozone pollution it is desirable to construct maps of AOT40. However, data are limited and there is large inter-annual variation, so what is to be mapped is very variable, and our knowledge of it is limited. This paper describes a spatially referenced random effects model which appears able to describe many features of the data and our uncertainty about them. The problem of translating this or similar models into a map faithfully representing our knowledge is considered, as are some questions it raises about decision-makers' and the public's need for and use of technical models.

Air Pollutants↗

Modelling photochemical oxidant formation, transport, deposition and exposure of terrestrial ecosystems.

The chemical processes responsible for production of photochemical oxidants within the troposphere have been the subject of laboratory and field study throughout the last three decades. During the same period, models to simulate the atmospheric chemistry, transport and deposition of ozone (O(3)) from individual urban sources and from regions have been developed. The models differ greatly in the complexity of chemical schemes, in the underlying meteorology and in spatial and temporal resolution. Input information from land use, spatial and temporally disaggregated emission inventories and meteorology have all improved considerably in recent years and are not fully implemented in current models. The development of control strategies in both North America and Europe to close the gaps between current exceedances of environmental limits, guide values, critical levels or loads and full compliance with these limits provides the focus for policy makers and the support agencies for the research. The models represent the only method of testing a range of control options in advance of implementation. This paper describes currently applied models of photochemical oxidant production and transport at global and regional scales and their ability to simulate individual episodes as well as photochemical oxidant climatology. The success of current models in quantifying the exposure of terrestrial surfaces and the population to potentially damaging O(3) concentrations (and dose) is examined. The analysis shows the degree to which the underlying processes and their application within the models limit the quality of the model products.

Journal Article↗

Convergent strabismus in a white Bengal tiger.

A white Bengal tiger was noted to have a convergent strabismus with poor vision since a cub. The tiger and a littermate with normal colouring and apparently normal eyes were anaesthetised for comparative ocular examination. A fundus typical of colour-dilute cats and dogs was noted in the white tiger. Except for strabismus, no abnormalities were observed. Electroretinography showed similar retinal function in both tigers. Possible causes of strabismus considered were an adaptation to genetically determined abnormal visual pathways related to lack of pigment, abnormalities of the abducent nerves and mechanical restricting conditions of the medial rectus muscles.

Animals↗

Air pollution statistics in policy applications.

This review of the role of air pollution statistics in environmental policy sets the UK current controls of sulfur emissions for health and environmental effects in a historical context. The use of critical loads and levels is discussed. The role of air pollution monitoring data in assessing achievement of a health effects air quality standard or predicting exceedance of a critical level or critical load on a national basis is reviewed with the level of monitoring and the interpolation of concentration data identified as important issues. The problems of spatial scale, the scarcity of data for model validation and the use of trends to identify model inadequacy are illustrated. The current statistical challenges in understanding air pollution processes and defining appropriate policies include quantification of uncertainty within complex models, problems of spatial scale and model validation, and development of monitoring strategies which balance the spatial (more sites) and temporal (better process understanding) aspects of the science alongside the balance between policy desire and monitoring practicality. An appropriate statistical goal is development of methodology to ensure appropriate derived data with sufficient accuracy are used for measuring policy achievement.

Air Pollution↗

Stem growth reduction in mature Sitka spruce trees exposed to acid mist.

An eighteen-year-old clone of Sitka spruce (Picea sitchensis (Bong.) Carr) growing in the field was used to evaluate the whole tree response of 'mature' Sitka spruce to acid mist treatment. The mist, an equimolar mixture of H(2)SO(4) and NH(4)NO(3) at pH 2.5 with or without particles (soda glass ballotini < 20 microm diameter), was applied twice weekly (equivalent to 4 mm precipitation week(-1)) throughout the growing season, May-November 1990-1992. The annual dose of S, N, H applied as mist (at 51, 48 and 3.3 kg ha(-1), respectively) was 2.5 times that measured in the Scottish uplands. Throughout the experiment there was no evidence of visible injury symptoms, yet there was a highly significant reduction (p < 0.02) in the stem-area increment relative to the stem area at the start, measured using vernier dendrometer bands. There was no significant difference between the (acid mist + particle) and the acid mist only treatments. The mean relative stem-area increment over two complete growing seasons (1991-1992) was 65% for control trees, but only 53% for acid-misted trees.

Journal Article↗

Addition of a mu-tailpiece to IgG results in polymeric antibodies with enhanced effector functions including complement-mediated cytolysis by IgG4.

The 18-amino acid carboxyl-terminal tailpiece from IgM (mutp) has now been added to the carboxyl-termini of IgG1, IgG2, IgG3, and IgG4 constant regions to produce recombinant IgM-like IgGs. Polymeric IgGs obtained by this approach possess up to six Fcs and 12 antigen-combining sites, greatly increasing the avidity of their interactions with other molecules. Not surprisingly, the C activity of normally active IgG1 and IgG3 and somewhat less active IgG2 Abs is shown to be dramatically enhanced upon polymerization. The multiple Fcs present in a single molecule apparently allow for more efficient interactions with the multiple C1q heads present in C1, the first component of the classical C cascade. An unexpected result however, is that IgG4, normally devoid of C activity, when polymerized in the same fashion directs C-mediated lysis of target cells almost as effectively as the other polymers. Interestingly though, IgG4mutp does not deplete C activity in a standard consumption assay using soluble Ag. The other gamma mutp isotypes are capable of depleting 100% of the serum lytic ability even in the absence of Ag, whereas IgG4mutp shows no evidence of activity in this assay under any of the conditions tested. Additionally, we show that, in contrast to monomeric IgG, polymeric IgGs bind with very high affinity to Fc gamma receptor II (Fc gamma RII), a low affinity receptor for wild-type antibodies; however, binding to Fc gamma Rl, the high affinity receptor, appears to be unaltered. Finally, the in vivo t1/2 of the gamma mutp proteins is decreased relative to wild-type IgG, apparently because of rapid clearance of the polymeric fraction.

Amino Acid Sequence↗

An investigation of the impact of afforestation on stream-water chemistry in the Loch Dee catchment, SW Scotland.

The impact of conifer afforestation on stream-water chemistry was investigated in the acidified catchment of Loch Dee, SW Scotland. Long-term trends in stream-water chemistry were evaluated during a period of forest growth from age 6 to 17 years. A significant increase was observed for pH (0.2 units) and a significant decline for aluminium (0.05 mg litre(-1)), sulphate (1.2 mg litre(-1)) and nitrate (0.02 mg litre(-1)) concentrations. The long-term decrease in stream-water acidity was ascribed to the marked reductions in sulphur depositions during the 1970s and early 1980s. There was no evidence that this response had been attenuated by afforestation, the improvements in stream-water chemistry being of a similar magnitude to those recorded in nearby moorland lochs and exceeding that in an adjacent moorland-catchment stream. The lack of a clear forest acidification effect is consistent with deposition-model estimates which show the increased scavenging of occult and dry deposition by the growing forest to be small at this site (</=10%). Critical load calculations suggest that planned emission reductions will be sufficient to protect the catchment stream from further acidification by 2003. The additional deposition capture by the continued growth of the forest is predicted to delay this response by approximately 2 years.

Journal Article↗

Recombinant polymeric IgG: an approach to engineering more potent antibodies.

IgM and IgG are the only classes of immunoglobulin capable of initiating the classical complement cascade. IgM, however, fixes complement much more effectively than IgG making it a more attractive Fc for some immunotherapeutic strategies. IgG, on the other hand, triggers additional effector functions mediated through gamma specific Fc receptors. Using a generalizable technique we have produced IgM-like polymers of IgG that possess both the Fc gamma receptor binding properties of IgG and the more potent complement activity of IgM.

Animals↗