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R J Hoffmann

Publications and source records attributed to R J Hoffmann.

10 recordsLinked to original sources
PubMed1992

A novel mitochondrial genome organization for the blue mussel, Mytilus edulis.

The sequence of 13.9 kilobases (kb) of the 17.1-kb mitochondrial genome of Mytilus edulis has been determined, and the arrangement of all genes has been deduced. Mytilus mitochondrial DNA (mtDNA) contains 37 genes, all of which are transcribed from the same DNA strand. The gene content of Mytilus is typically metazoan in that it includes genes for large and small ribosomal RNAs, for a complete set of transfer RNAs and for 12 proteins. The protein genes encode the cytochrome b apoenzyme, cytochrome c oxidase (CO) subunits I-III, NADH dehydrogenase (ND) subunits 1-6 and 4L, and ATP synthetase (ATPase) subunit 6. No gene for ATPase subunit 8 could be found. The reading frames for the ND1, COI, and COIII genes contain long extensions relative to those genes in other metazoan mtDNAs. There are 23 tRNA genes, one more than previously found in any metazoan mtDNA. The additional tRNA appears to specify methionine, making Mytilus mtDNA unique in having two tRNA(Met) genes. Five lengthy unassigned intergenic sequences are present, four of which vary in length from 79 to 119 nucleotides and the largest of which is 1.2 kb. The base compositions of these are unremarkable and do not differ significantly from that of the remainder of the mtDNA. The arrangement of genes in Mytilus mtDNA is remarkably unlike that found in any other known metazoan mtDNA.

Adenosine Triphosphatases↗
PubMed1989

Allozymes of glucose-6-phosphate isomerase differentially modulate pentose-shunt metabolism in the sea anemone Metridium senile.

We tested the hypothesis that kinetic differences among allelic variants of glucose-6-phosphate isomerase (GPI; D-glucose-6-phosphate ketol-isomerase, EC 5.3.1.9) from the sea anemone Metridium senile differentially modulate glucose metabolism at the glycolysis-pentose-shunt branch point. Fractional contribution of pentose shunt and absolute flux of glucose in glycolysis were measured in fasted or fed anemones acclimated to 5 degrees C or 15 degrees C. When fed, anemones of genotype Gpiss routed a greater fraction of glucose through the shunt than did Gpiff anemones; the effect was more pronounced at 5 degrees C than at 15 degrees C. This confirms predictions from kinetic and population data and is consistent with thermal selection maintaining the variation. Relative levels of shunt metabolism increased at 5 degrees C, compared with 15 degrees C, in fed anemones regardless of genotype, but the proportion of glucose metabolized by the pentose shunt was unchanged by temperature in fasted anemones. Glucose flux through the shunt was constant at approximately 5 pmol.mg-1.hr-1 in fed anemones at 5 degrees C and 15 degrees C and in fasted anemones at 15 degrees C, indicating apparently near-perfect thermal acclimation of the absolute flux of glucose through the shunt in fed, but not in fasted, anemones. Rates of glucose oxidation and flux through the shunt in freshly collected anemones were similar to those of anemones fed and acclimated at 15 degrees C in the laboratory. If these differences affect organismal-level processes, Gpi variation could contribute to Darwinian fitness in thermally varying environments.

Animals↗
PubMed1985

Properties of allelic variants of phosphoglucomutase from the sea anemone Metridium senile.

The phosphoglucomutase (Pgm) locus from populations of the sea anemone Metridium senile has three alleles in natural populations from the northeastern coast of North America. Two of the alleles exhibit clinal variation north of Cape Cod, suggesting a possible association of allele frequency with environmental temperature. This clinal pattern is reproducible and stable over at least brief periods of time. The allozymes encoded by each of the six Pgm genotypes have been partially purified and characterized. The symmetrical pH optimum for Vmax is pH 7.5; the apparent Km (Kmapp) of glucose-1-phosphate declines monotonically as the pH increases from 6.5 to 8.5. There are no pronounced differences in heat stabilities of PGM produced by various genotypes, nor are there significant differences in specific activities. There are no differences in the sensitivity of Vmax to temperature. Kmapp values are very low for all genotypes, ranging from about 2 to 12 microM, depending upon the temperature. Kmapp of glucose-1-phosphate declines as the temperature is raised for all genotypes, whether the pH is held constant or allowed to vary with the temperature. Under certain conditions, there are small significant differences among genotypes in Kappm values, but there is no systematic pattern to these differences. The present data provide no biochemical explanation for the maintenance of the Pgm cline by selection for functional differences under different thermal regimes.

Alleles↗
PubMed1981

Evolutionary genetics of Metridium senile. I. Kinetic differences in phosphoglucose isomerase allozymes.

Populations of the sea anemone Metridium senile from the northeast coast of the United States exhibit a one-locus, two-allele polymorphism for phosphoglucose isomerase. No additional "hidden" variation is exposed by changes in pH, gel pore size, or heat denaturation. The allozymes are similar in pH optimum, sensitivity of Km to pH, and sensitivity of Km and Vmax to temperature. In other respects they are functionally different, with the fast allozyme having a 3.5-fold higher specific activity and a slightly higher Km of fructose-6-phosphate than the slow form. In these respects, heterozygotes produce a mixture of enzymes that appears to function roughly as the sum of its component parts. Comparisons of Vmax/Km ratios reveal significant differences among genotypes, with the fast form having higher values at all temperatures than the slow form and heterozygotes falling intermediate. In addition, there is a significant difference among genotypes in sensitivity of this parameter to temperature, with the fast homozygote and heterozygote displaying greater sensitivity than the slow homozygote. Temperature is probably an important selective agent in maintaining this polymorphism.

Alleles↗
PubMed1981

Evolutionary genetics of Metridium senile. II. Geographic patterns of allozyme variation.

Electrophoretic surveys have demonstrated that populations of the sea anemone Metridium senile along the northeast coast of the United States are polymorphic at four enzyme loci. Phosphoglucose isomerase (PGI) has two alleles in most populations, phosphoglucomutase (PGM) has three alleles, and two leucine aminopeptidase loci have two common alleles each. Phosphoglucose isomerase displays clinial variation and an apparent association with environmental temperature. Phosphoglucomutase shows clinial variation north of Cape Cod for two of the three alleles, while the two leucine aminopeptidase loci are not clinial. All loci show a great deal of variation in populations on Cape Cod, but there is no apparent systematic pattern of this variation. Temperature may be a selective agent in the maintenance of the PGI and PGM clines, although other possibilities cannot presently be completely excluded.

Alleles↗
PubMed1978

Glutamate dehydrogenase from coelenterates is NADP specific.

Glutamate dehydrogenases detected in tissue extracts of a broad sample of coelenterate species all require NADP(H) as a co-substrate, rather than being capable of using either NAD(H) or NADP(H). In this respect, the coelenterate phyla appear to be unique in the animal kingdom.

Animals↗
PubMed1976

Genetics and asexual reproduction of the sea anemone Metridium senile.

1. Metridium senile was studied for phosphohexose-isomerase variation at three locations on Cape Cod, Massachusetts: Woods Hole, Cape Cod Canal, and Barnstable Town Boat Harbor. 2. All three locations exhibited significant polymorphism for PHI. 3. Mapping of individual polyps was performed at Barnstable to analyze spatial distributions of clones and genotypes. 4. In Barnstable, PHI does not depart significantly from Hardy-Weinberg expectations at the time of establishment of new polyps, and establishment of larvae is spatially random with respect to PHI genotype. 5. Asexual reproduction was uses as a meausre of the relative success of different PHI genotypes. There are indications that not all genotypes are equally likely to produce large clones. 6. There is significant heterogeneity among the three locations with respect to PHI genotype frequencies, suggesting that there may be geographical differentiation of the populations. 7. Sessile, asexual organisms provide powerful tools for examining the dynamic aspects of genetic structure in natural populations.

Animals↗