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Biomedical subjects

Richard M Crooks

Publications and source records attributed to Richard M Crooks.

13 recordsLinked to original sources
PubMed2003

Microelectrochemical logic circuits.

We report microelectrochemical devices that mimic some functions of solid-state circuit components such as diodes and transistors. The operation of this new family of devices is enabled by a network of microfluidic electrochemical cells that communicate with one-another via conductive solutions and, in some cases, bipolar electrodes. The output of the devices can be either electrochemical or optical. The approach reported here is a first step toward the development of large-scale integrated electrochemical systems having parallel processing capabilities.

Journal Article↗
PubMed2003

Measurement of enzyme kinetics using a continuous-flow microfluidic system.

This paper describes a microanalytical method for determining enzyme kinetics using a continuous-flow microfluidic system. The analysis is carried out by immobilizing the enzyme on microbeads, packing the microbeads into a chip-based microreactor (volume approximately 1.0 nL), and flowing the substrate over the packed bed. Data were analyzed using the Lilly-Hornby equation and compared to values obtained from conventional measurements based on the Michaelis-Menten equation. The two different enzyme-catalyzed reactions studied were chosen so that the substrate would be nonfluorescent and the product fluorescent. The first reaction involved the horseradish peroxidase-catalyzed reaction between hydrogen peroxide and N-acetyl-3,7-dihydroxyphenoxazine (amplex red) to yield fluorescent resorufin, and the second the beta-galactosidase-catalyzed reaction of nonfluorescent resorufin-beta-D-galactopyranoside to yield D-galactose and fluorescent resorufin. In both cases, the microfluidics-based method yielded the same result obtained from the standard Michaelis-Menten treatment. The continuous-flow method required approximately 10 microL of substrate solution and 10(9) enzyme molecules. This approach provides a new means for rapid determination of enzyme kinetics in microfluidic systems, which may be useful for clinical diagnostics, and drug discovery and screening.

Catalysis↗
PubMed2003

Simultaneous determination of the size and surface charge of individual nanoparticles using a carbon nanotube-based Coulter counter.

A resistive-pulse Coulter counter based on a membrane containing a single multiwall carbon nanotube (MWNT) channel was used to simultaneously determine the size and surface charge of carboxy-terminated polystyrene nanoparticles. The membrane was prepared from an epoxy section containing a MWNT channel mounted on a poly(dimethylsiloxane) (PDMS) support structure. The PDMS support reduced the background noise level by a factor of > 20 compared to the Si/Si3N4 support structure used in our previous study. The lower noise level makes it possible to accurately measure the height and width of resistive-pulse signals resulting from transport of individual particles through the MWNT channel. Particle sizes, calculated from current pulse heights, were comparable to those determined by transmission electron microscope (TEM). The width of the current pulses is a measure of the nanoparticle transport time, and it permits calculation of the electrokinetic surface charge. Different types of polystyrene nanoparticles having nearly the same size, but different electrokinetic surface charge, could be resolved on the basis of the difference in their transport time.

Electric Impedance↗
PubMed2003

Bimetallic palladium-platinum dendrimer-encapsulated catalysts.

We report the synthesis, characterization, and catalytic activity of bimetallic palladium-platinum dendrimer-encapsulated catalysts (DECs). These materials are prepared by co-complexation of different ratios of palladium and platinum salts to the interior tertiary amines of fourth-generation, hydroxyl-terminated poly(amidoamine) (PAMAM) dendrimers. Chemical reduction of these composites yields stable, fairly monodisperse, water-soluble bimetallic DECs having sizes on the order of 1.9 +/- 0.4 nm. Evidence that these nanoparticles are bimetallic comes from single-particle X-ray energy dispersive spectroscopy (EDS) and catalysis experiments. The latter indicate that the hydrogenation rate of allyl alcohol is enhanced in the presence of the bimetallic nanoparticles compared to DECs containing only platinum or only palladium nanoparticles. EDS results indicate that the percentage composition of the bimetallics is reflected by the percentage of metal salts initially complexed with the dendrimer.

Journal Article↗
PubMed2003

A multichannel microfluidic sensor that detects anodic redox reactions indirectly using anodic electrogenerated chemiluminescence.

Here, we describe a new approach for detecting redoxactive targets by electrochemical oxidation and reporting their presence by electrogenerated chemiluminescence (ECL) based on electrochemical oxidation of Ru(bpy)3(2+) (bpy = 2,2'-bipyridine) and tripropylamine (TPA). This new strategy, which complements our previous reports of using ECL to signal the presence of targets undergoing electrochemical reduction, takes advantage of many of the attractive attributes of microfluidic-based electrochemical cells. These attributes include close proximity of multiple flow channels and electrodes, ability to move reagents through channels under laminar flow conditions, and the capacity to precisely place device components relative to one another using photolithography. Specifically, the microfluidic electrochemical sensor described here consists of three channels. The analyte and ECL reporting cocktail flow through separate channels, but they share a common anode. The cathode resides in a channel containing a sacrificial reductant. In this configuration, the target analyte competes with Ru(bpy)3(2+) and TPA to provide electrons for the reductant. Accordingly, in this competitive assay approach, the presence of the analyte is signaled as a lowering of the ECL intensity. In this report, the device performance characteristics are reported, and the detection of both ferrocyanide and dopamine is demonstrated at micromolar concentrations.

Journal Article↗
PubMed2003

A two-channel microfluidic sensor that uses anodic electrogenerated chemiluminescence as a photonic reporter of cathodic redox reactions.

This paper describes a new approach for sensing electrochemically active substrates in microfluidic systems. This two-electrode sensor relies on electrochemical detection at one electrode and electrogenerated chemiluminescent (ECL) reporting at the other. Each microfabricated indium tin oxide electrode is located in a separate microfluidic channel, but the channels are connected downstream of the electrodes to maintain a complete electrical circuit. Because of laminar flow, there is no bulk mixing of the fluids in the detecting and reporting channels. This approach allows the ECL reaction to be physically and chemically decoupled from the sensing channel of the device, which greatly expands the number of analytes that can be detected. However, because the cathode and anode are connected, electron-transfer processes occurring at the sensing electrode are electrically coupled to the ECL reaction. Charge balance permits the ECL light output to be quantitatively correlated to electrochemical reductions at the cathode. The system is used to detect Fe(CN)6(3-), Ru(NH3)6(3+), and benzyl viologen and report their presence via Ru(bpy)3(2+) (bpy = bipyridine) luminescence. Each different redox target initiates ECL at a unique potential bias related to its standard redox potential. The influence of the concentrations of Ru(bpy)3(2+) and the target analytes is discussed.

Journal Article↗
PubMed2003

A microfluidic bioreactor based on hydrogel-entrapped E. coli: cell viability, lysis, and intracellular enzyme reactions.

Viable E. coli cells were entrapped in hydrogel micropatches photopolymerized within microfluidic systems. The microfluidic channels and the micropatches have sizes on the order of 100-500 microm. Small molecules, such as dyes and surfactants, present in the solution surrounding the hydrogel, are able to diffuse into the gel and encounter the cells, but the cells are sufficiently large to be retained. For example, sodium dodecyl sulfate is a lysis agent that is able to penetrate the hydrogel and disrupt the cellular membrane. Entrapment of viable cells within hydrogels, followed by lysis, could provide a convenient means for preparing biocatalysts without the need for enzyme extraction and purification. Hydrogel-immobilized cells are able to carry out chemical reactions within microfluidic channels. Specifically, a nonfluorescent dye, BCECF-AM, is able to penetrate both the hydrogel and the bacterial membrane and be converted into a fluorescent form (BCECF) by the interior cellular machinery. These results suggest that cells immobilized within microfluidic channels can act as sensors for small molecules and as bioreactors for carrying out reactions.

Bioreactors↗
PubMed2002

Efficient mixing and reactions within microfluidic channels using microbead-supported catalysts.

A strategy for efficiently mixing solutions and carrying out multistep catalytic reactions in microfluidic systems is described. The approach involves immobilizing catalysts on microbeads, placing the beads into well-defined microreactor zones, and then passing reactants through one or more of the reactor zones to yield products. The catalyst-modified beads effectively mix reactants and increase the effective surface area of the channel interior, both of which improve reaction velocities compared to open channels. This approach is demonstrated using two sequential reactions catalyzed by glucose oxidase and horseradish peroxidase. In addition to providing a general route to chemical synthesis within microfluidic systems, this design strategy may also be applicable to modeling reaction pathways within cells and to bio/chemical sensing applications.

Biosensing Techniques↗
PubMed2002

Electrochemical sensing in microfluidic systems using electrogenerated chemiluminescence as a photonic reporter of redox reactions.

This paper describes a microfluidics-based sensing system that relies on electrochemical detection and electrogenerated chemiluminescent (ECL) reporting. The important result is that the ECL reporting reaction is chemically decoupled from the electrochemical sensing reaction. That is, the electrochemical sensing reaction does not participate directly in the ECL process, but because electrochemical cells require charge balance, the sensing and ECL reactions are electrically coupled. This provides a convenient and sensitive means for direct photonic readout of electrochemical reactions that do not directly participate in an ECL reaction and thus broadens the spectrum of redox compounds that can be detected by ECL. The approach can be implemented in either a two-electrode or bipolar (single-electrode) configuration. By manipulating the placement and dimensions of the conductors, the photonic response can be enhanced. The system is used to electrochemically detect benzyl viologen present in solution and report its presence via Ru(bpy)(3)(2+) (bpy = 2,2'-bipyridine) luminescence.

Journal Article↗
PubMed2002

Hydrogel-based microreactors as a functional component of microfluidic systems.

A simple two-step method for fabricating poly(ethylene glycol) (PEG) hydrogel-based microreactors and microsensors within microfluidic channels is described. The intrachannel micropatches contain either a dye, which can report the pH of a solution within a fluidic channel, or enzymes that are able to selectively catalyze specific reactions. Analytes present within the microfluidic channel are able to diffuse into the micropatches, encounter the enzymes, and undergo conversion to products, and then the products interact with the coencapsulated dye to signal the presence of the original substrate. The micropatches are prepared by photopolymerizing the PEG precursor within the channel of a microfluidic system consisting of a poly(dimethylsiloxane) mold and a glass plate. Exposure takes place through a slit mask oriented perpendicular to the channel, so the size of the resulting micropatch is defined by the channel dimensions and the width of the slit mask. Following polymerization, the mold is removed, leaving behind the micropatch(es) atop the glass substrate. The final microfluidic device is assembled by irreversibly binding the hydrogel-patterned glass slide to a second PDMS mold that contains a larger channel. Multiple micropatches containing the same or different enzymes can be fabricated within a single channel. The viability of this approach is demonstrated by sensing glucose using micropatches copolymerized with glucose oxidase, horseradish peroxidase, and a pH-sensitive dye.

Journal Article↗
PubMed2002

Fabrication of microchambers defined by photopolymerized hydrogels and weirs within microfluidic systems: application to DNA hybridization.

This paper describes fabrication of serial microchamber arrays within the channels of a microfluidic device. The chambers are defined using a combination of weirs and UV-cross-linked hydrogel plugs (poly(ethylene glycol) diacrylates). This approach permits the microchambers to be addressed by pump-driven pressure in one dimension and by electrophoresis in the other. The function of the device is demonstrated by detecting DNA targets. Single-strand DNA (ssDNA) probes labeled with biotin were immobilized onto microbeads coated with streptavidin. The DNA-functionalized microbeads were packed into each of three microchambers by injection through inlet wells. Three oligonucleotides were designed as probes and four as targets. Hybridization reactions were performed by moving the targets across the array of probe-containing microchambers by electrophoresis. The hybridization of fluorescein-labeled ssDNA targets to complementary probes was observed by fluorescence microscopy. These studies resulted in four key observations: (1) there was no detectable binding of targets to noncomplementary probes; (2) hybridization was 90% complete within 1 min; (3) once captured, the targets could be independently released and recovered from the microbeads by treatment with 0.1 N NaOH; (4) multiple analyses could be performed using a single bead set, but there was degradation in performance after each capture/release cycle.

DNA, Single-Stranded↗
PubMedDate not supplied

Synthesis and characterization of covalently linked single-stranded DNA oligonucleotide-dendron conjugates.

A solution-phase synthesis and characterization of covalent DNA-dendron conjugates is presented. Thiol-terminated 12-base oligonucleotides were added to second- and third-generation triazine-based dendrons via thiol/disulfide exchange chemistry. Single-stranded DNA oligonucleotides were successfully attached to dendrons at the core, the periphery, and both. Proof of structure for these architectures is derived primarily from mass spectrometry and polyacrylamide gel electrophoresis and complemented by labeling analysis using Ellman's reagent and degradation analysis using a reducing agent.

Coloring Agents↗