Biomedical subjects

Rong-Xing He

Publications and source records attributed to Rong-Xing He.

4 recordsLinked to original sources

PubMed2006

Continuous medium theory for nonequilibrium solvation: IV. Solvent reorganization energy of electron transfer based on conductor-like screening model.

In this work the authors present some evidences of defects in the popular continuous medium theories for nonequilibrium solvation. Particular attention has been paid to the incorrect reversible work approach. After convincing reasoning, the nonequilibrium free energy has been formulated to an expression different from the traditional ones. In a series of recent works by the authors, new formulations and some analytical application models for ultrafast processes were developed. Here, the authors extend the new theory to the cases of discrete bound charge distributions and present the correct form of the nonequilibrium solvation energy in such cases. A numerical solution method is applied to the evaluation of solvent reorganization energy of electron transfer. The test calculation for biphenyl-cyclohexane-naphthalene anion system achieves excellent agreement with the experimental fitting. The central importance presented in this work is the very simple and a consistent form of nonequilibrium free energy for both continuous and discrete charge distributions, based on which the new models can be established.

Journal Article↗

PubMed2005

Theoretical investigation of spectral properties and tautomerization mechanism of 2-aminopurine.

In this work the spectral properties and tautomerization mechanism of 2-aminopurine are investigated using quantum chemical calculations. TD-DFT results lead to a conclusion that two tautomers of 2-aminopurine discussed in this work are fluorescent and present the pi-->pi* transition feature of vertical excitation and emission. It is predicted that the tautomerization of 2-aminopurine hardly occurs in a direct isomerization mechanism because of the high barrier. However, the explicit involvement of water molecules into the system reduces the barrier height considerably and hence makes the ground state reaction feasible. An explanation for the almost equal populations of the two tautomers in polar solvent is given through reaction mechanism analysis.

2-Aminopurine↗

PubMed2005

Quantum chemical study on excited states and electronic coupling matrix element in a catechol-bridge-dicyanoethylene system.

The excited states of a donor-bridge-acceptor (DBA) model system have been investigated using time-dependent density-functional theory (TD-DFT) in vacuo and in solution. It is found that the MPW1PW91 functional always gives higher excitation energies than those with a B3LYP functional. Results from both TD-B3LYP and TD-MPW1PW91 are found consistent with the experimental observations. The two most intense absorptions of the DBA system, one resulting from the local excitation of catechol moiety and the other from that of dicyanoethylene, possess the pipi* transition feature. It seems that the solvent polarity does not remarkably influence the positions of absorption peaks. The spectroscopic properties of isolated donor, acceptor, and bridge and the donor-bridge compound have been investigated at the TD-B3LYP/6-31+G* and TD-MPW1PW91/6-31+G* levels. Results indicate that the donor and the acceptor are weakly coupled with the bridge. Therefore, it is more likely that the electron transfer takes place through a superexchange mechanism. In addition, we calculate the electronic coupling matrix elements according to the generalized Mulliken-Hush theory, and the detailed analyses also predict that the strong absorptions are due to the local excitation of the DBA system.

Acetonitriles↗

PubMed2005

Time-dependent density functional theory study on intramolecular charge transfer and solvent effect of dimethylaminobenzophenone.

The lower singlet excited states for dimethylaminobenzophenone have been investigated as a function of the twisting motion with inclusion of solvent effects. Theoretical calculations have been performed using time-dependent density functional theory. The B3LYP and MPW1PW91 functionals with a 6-311+G(2d,p) basis set have been used to compute transition energies. The solvent effects have been described within the polarizable continuum model. Ground-state geometries are optimized using density functional theory with both B3LYP and MPW1PW91 functionals combined with 6-31G(d) basis sets. Vertical absorption energy calculations characterize the lower singlet excited states both in vacuum and in different kinds of solvents. A large redshift of the absorption maximum in the polar solvent suggests an intramolecular charge transfer character of the excited state. We have constructed the potential energy curves of two possible twisting motions of the excited states both in vacuum and in the polar solvent of acetonitrile: the twisting of only the dimethylamino group and the twisting of the dimethylaminophenyl group with respect to the benzoyl group. Both twisting processes predict the formation of the twisted intramolecular charge transfer state associated with the crossing of a low barrier. The presence of the polar solvent significantly changes the shape of the energy curves. Calculated emission energies for both the isolated and the solvated systems show a large Stokes shift between the absorption and fluorescence maxima. Two possible twisting motions produce similar fluorescence spectroscopic consequences. Our results including solvent effects explain the weak "dual-fluorescence" feature of dimethylaminobenzophenone, and imply that the two possible twisting motions may occur in the excited-state relaxation dynamics, but the twisting of the dimethylamino group seems to take place easier.

Journal Article↗