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Rudi Van Eldik

Publications and source records attributed to Rudi Van Eldik.

4 recordsLinked to original sources

Substrate binding favors enhanced NO binding to P450cam.

Ferric cytochrome P450cam from Pseudomonas putida (P450cam) in buffer solution at physiological pH 7.4 reversibly binds NO to yield the nitrosyl complex P450cam(NO). The presence of 1R-camphor affects the dynamics of NO binding to P450cam and enhances the association and dissociation rate constants significantly. In the case of the substrate-free form of P450cam, subconformers are evident and the NO binding kinetics are much slower than in the presence of the substrate. The association and dissociation processes were investigated by both laser flash photolysis and stopped-flow techniques at ambient and high pressure. Large and positive values of S and V observed for NO binding to and release from the substrate-free P450cam complex are consistent with the operation of a limiting dissociative ligand substitution mechanism, where the lability of coordinated water dominates the reactivity of the iron(III)-heme center with NO. In contrast, NO binding to P450cam in the presence of camphor displays negative activation entropy and activation volume values that support a mechanism dominated by a bond formation process. Volume profiles for the binding of NO appear to be a valuable approach to explain the differences observed for P450cam in the absence and presence of the substrate and enable the clarification of the underlying reaction mechanisms at a molecular level. Changes in spin state of the iron center during the binding/release of NO contribute significantly to the observed volume effects. The results are discussed in terms of relevance for the biological function of cytochrome P450 and in context to other investigations of the related reactions between NO and imidazole- and thiolate-ligated iron(III) hemoproteins.

Animals↗

Kinetics and mechanism of water substitution in the low-spin Fe(II) complex of 4-octasulfophenylpyrazinoporphyrazine.

The substitution reaction of the axial-coordinated water by pyridine, pyrazine and 4-CN-pyridine in the low-spin Fe(II) complex of octasulfophenyltetrapyrazinoporphyrazine was studied. Kinetic and thermodynamic parameters for the different reaction steps of the process were determined. On the basis of NMR data and spectrophotometric titrations, a pronounced non-equivalence of the two coordinated N-donor ligands was observed. The substitution of water by pyridine and 4-CN-pyridine is shown to include the formation of a precursor outer-sphere complex, whereas substitution by pyrazine follows a limiting dissociative mechanism.

Ferrous Compounds↗

Kinetics and mechanism of the interaction of nitric oxide with pentacyanoferrate(II). Formation and dissociation of [Fe(CN)5NO]3 -.

The interaction of NO with [Fe(CN)(5)H(2)O](3)(-) (generated by aquation of the corresponding ammine complex) to produce [Fe(CN)(5)NO](3)(-) was studied by UV-vis spectrophotometry. The reaction product is the well characterized nitrosyl complex, described as a low-spin Fe(II) bound to the NO radical. The experiments were performed in the pH range 4-10, at different concentrations of NO, temperatures and pressures. The rate law was first-order in each of the reactants, with the specific complex-formation rate constant, k(f)( )()= 250 +/- 10 M(-)(1) s(-)(1) (25.4 degrees C, I = 0.1 M, pH 7.0), DeltaH(f)() = 70 +/- 1 kJ mol(-)(1), DeltaS(f)() = +34 +/- 4 J K(-)(1) mol(-)(1), and DeltaV(f)() = +17.4 +/- 0.3 cm(3) mol(-)(1). These values support a dissociative mechanism, with rate-controlling dissociation of coordinated water, and subsequent fast coordination of NO. The complex-formation process depends on pH, indicating that the initial product [Fe(CN)(5)NO](3)(-) is unstable, with a faster decomposition rate at lower pH. The decomposition process is associated with release of cyanide, further reaction of NO with [Fe(CN)(4)NO](2)(-), and formation of nitroprusside and other unknown products. The decomposition can be prevented by addition of free cyanide to the solutions, enabling a study of the dissociation process of NO from [Fe(CN)(5)NO](3)(-). Cyanide also acts as a scavenger for the [Fe(CN)(5)](3)(-) intermediate, giving [Fe(CN)(6)](4)(-) as a final product. From the first-order behavior, the dissociation rate constant was obtained as k(d) = (1.58 +/- 0.06) x 10(-)(5) s(-)(1) at 25.0 degrees C, I = 0.1 M, and pH 10.2. Activation parameters were found to be DeltaH(d)() = 106.4 +/- 0.8 kJ mol(-)(1), DeltaS(d)() = +20 +/- 2 J K(-)(1) mol(-)(1), and DeltaV(d)() = +7.1 +/- 0.2 cm(3) mol(-)(1), which are all in line with a dissociative mechanism. The low value of k(d) as compared to values for the release of other ligands L from [Fe(II)(CN)(5)L](n)()(-) suggests a moderate to strong sigma-pi interaction of NO with the iron(II) center. It is concluded that the release of NO from nitroprusside in biological media does not originate from [Fe(CN)(5)NO](3)(-) produced on reduction of nitroprusside but probably proceeds through the release of cyanide and further reactions of the [Fe(CN)(4)NO](2)(-) ion.

Journal Article↗

Self-exchange reaction kinetics of metallocenes revisited: insights from the decamethylferricenium-decamethylferrocene reaction at variable pressure.

Rate constants k(ex) and volumes of activation deltaV(ex) have been obtained using (1)H NMR for the self-exchange reaction of the [(eta(5)-C(5)(CH(3))(5))(2)Fe](+) hexafluorophosphate and tetrafluoroborate with [(eta(5)-C(5)(CH(3))(5))(2)Fe] in acetone-d(6) (deltaV(ex) = -8.6 +/- 0.3 cm(3) mol(-)(1)), dichloromethane-d(2), and (semiquantitatively) in acetonitrile-d(3). Under the experimental conditions, ion pairing was significant only in CD(2)Cl(2), but even that produced only a minor reduction in k(ex) and so had a negligible effect on deltaV(ex) ( = -6.4 +/- 0.2 cm(3) mol(-)(1) with PF(6)(-)). In all cases, deltaV(ex) is negative and consistent with a simple two-sphere activation model, rather than with that of Weaver et al. (Nielson, R. M.; McManis, G. E.; Safford, L. K.; Weaver, M. J. J. Phys. Chem. 1989, 93, 2152) in which the barrier crossing rate is limited by solvent dynamics. Similarly, the approximately 5-fold increase in k(ex) on going from [(eta(5)-C(5)H(5))(2)Fe](+/0) to [(eta(5)-C(5)(CH(3))(5))(2)Fe](+/0) in acetone can be explained with the two-sphere model on the basis of the effects of reactant size on the solvent reorganization energy, without reference to solvent dynamics.

Journal Article↗