PubMed Health⌕ Search

Biomedical subjects

S C Thomas

Publications and source records attributed to S C Thomas.

At least 19 recordsLinked to original sources
PubMed2006

Assessing the potential of native tree species for carbon sequestration forestry in Northeast China.

Although the native forests of China are exceptionally diverse, only a small number of tree species have been widely utilized in forest plantations and reforestation efforts. We used dendrochronological sampling methods to assess the potential growth and carbon sequestration of native tree species in Jilin Province, Northeast China. Trees were sampled in and near the Changbaishan Biosphere Reserve, with samples encompassing old-growth, disturbed forest, and plantations. To approximate conditions for planted trees, sampling focused on trees with exposed crowns (dominant and co-dominant individuals). A log-linear relationship was found between diameter increment and tree diameter, with a linear decrease in increment with increasing local basal area; no significant differences in these patterns between plantations and natural stands were detected for two commonly planted species (Pinus koraiensis and Larix olgensis). A growth model that incorporates observed feedbacks with individual tree size and local basal area (in conjunction with allometric models for tree biomass), was used to project stand-level biomass increment. Predicted growth trajectories were then linked to the carbon process model InTEC to provide estimates of carbon sequestration potential. Results indicate substantial differences among species, and suggest that certain native hardwoods (in particular Fraxinus mandshurica and Phellodendron amurense), have high potential for use in carbon forestry applications. Increased use of native hardwoods in carbon forestry in China is likely to have additional benefits in terms of economic diversification and enhanced provision of "ecosystem services", including biodiversity protection.

Biodiversity↗
PubMed2006

Wood carbon content of tree species in Eastern China: interspecific variability and the importance of the volatile fraction.

Data on the mass density and carbon content of tree organs, and in particular stem wood, are essential for accurate assessments of forest carbon sequestration. However most available data, including that for East Asia, has neglected the volatile C fraction. Wood samples were collected and assayed for C content from 14 native tree species in Jilin Province, NE China. C content showed statistically significant variation among species, ranging from 48.4% to 51.0%. The volatile C fraction was non-negligible, averaging 2.2%, and showed high variation among species. As found in prior studies, wood C content was appreciably higher in conifer than hardwood (angiosperm) species (50.8+/-0.1% vs. 49.5+/-0.2%, respectively). Wood carbon density (gC/cm(3)) showed very high inter-specific variation, due mainly to differences in wood specific gravity. Our analyses, in conjunction with recently published data from North America, indicate a global mean value of 47.5+/-0.5% wood C content exclusive of volatile C; the widely used 50% figure corresponds more closely to total wood C inclusive of the volatile fraction. Failure to include volatile C or to use species- or higher-taxon-specific C content values in forest C assessments is likely to introduce biases on the order approximately 4-6%. In addition, the stocks and flows of the volatile C fraction in wood are in themselves an important and sorely neglected aspect of forest C processes likely to be strongly impacted by harvests and other management practices.

Carbon↗
PubMed2006

Enhancing forest carbon sequestration in China: toward an integration of scientific and socio-economic perspectives.

This article serves as an introduction to this special issue, "China's Forest Carbon Sequestration", representing major results of a project sponsored by the Canadian International Development Agency and the Chinese Academy of Sciences. China occupies a pivotal position globally as a principle emitter of carbon dioxide, as host to some of the world's largest reforestation efforts, and as a key player in international negotiations aimed at reducing global greenhouse gas emission. The goals of this project are to develop remote sensing approaches for quantifying forest carbon balance in China in a transparent manner, and information and tools to support land-use decisions for enhanced carbon sequestration (CS) that are science based and economically and socially viable. The project consists of three components: (i) remote sensing and carbon modeling, (ii) forest and soil assessment, and (iii) integrated assessment of the socio-economic implications of CS via forest management. Articles included in this special issue are highlights of the results of each of these components.

Air Pollution↗
PubMed2001

Ecology. Tropical forest diversity--the plot thickens.

Also see the archival list of Science's Compass: Enhanced Perspectives ECOLOGY:Enhanced: Tropical Forest Diversity--The Plot Thickens David F. R. P. Burslem, Nancy C. Garwood, Sean C. Thomas Ecologists have long pondered why tropical forests contain such a huge number of species and what factors might be responsible for maintaining this diversity. In a Perspective, Burslem and colleagues discuss unique data sets from the forest dynamics plots (FDP) network, which shed light on the factors responsible for tropical forest diversity. D. F. R. P. Burslem is in the Department of Plant and Soil Science, University of Aberdeen, Aberdeen AB24 3UU, UK. E-mail: d.burslem@abdn.ac.uk. N. C. Garwood is in the Department of Botany, Natural History Museum, London SW7 5BD, UK. E-mail: ncg@nhm.ac.uk. S. C. Thomas is in the Faculty of Forestry, University of Toronto, Toronto M5S 3B3, Canada. E-mail: sc.thomas@utoronto.ca

Ecosystem↗
PubMed2000

Estimating variance components in natural populations using inferred relationships.

Until recently, the estimation of the heritability of a trait has required knowledge of the pedigree within a population. In natural populations such knowledge is often unknown. Two techniques have been developed which use marker information to estimate heritabilities without reference to the exact nature of the relationships: a regression-based estimator that regresses phenotypic similarity for a pair of individuals against an estimate of their relationship and a likelihood-based estimator that maximizes the probability of the genotypic and phenotypic data given a known population structure. Computer simulation was used to compare the behaviour of these estimators. Bias in estimates of heritability decreased with increasing marker information, decreasing simulated heritability, increasing relatedness and increasing sample size. The techniques displayed reasonable tolerance to the percentage of missing data. The regression-based technique shows least average bias, but largest variance over simulations. Likelihood-based techniques show larger average bias, but smaller variances over estimates. A modified form of the likelihood technique, requiring fewer initial assumptions about population parameters, is presented. The modified form shows less bias in its estimates of heritability than the likelihood technique originally proposed.

Analysis of Variance↗
PubMed2000

The rise in obstetric intervention with maternal age: a continuous phenomenon.

Population-based data from the Cardiff Births Survey has been used to examine the trends in obstetric intervention with increasing maternal age. As maternal age increases, spontaneous vaginal delivery rates fall, instrumental delivery rates, elective and emergency caesarean section, induction of labour and epidural rates rise. Induction of labour and epidural in labour are both associated with decreased spontaneous vaginal delivery rates and an increase in instrumental delivery rates and emergency caesarean section.

Journal Article↗
PubMed2000

Estimating quantitative genetic parameters using sibships reconstructed from marker data.

Previous techniques for estimating quantitative genetic parameters, such as heritability in populations where exact relationships are unknown but are instead inferred from marker genotypes, have used data from individuals on a pairwise level only. At this level, families are weighted according to the number of pairs within which each family appears, hence by size rather than information content, and information from multiple relationships is lost. Estimates of parameters are therefore not the most efficient achievable. Here, Markov chain Monte Carlo techniques have been used to partition the population into complete sibships, including, if known, prior knowledge of the distribution of family sizes. These pedigrees have then been used with restricted maximum likelihood under an animal model to estimate quantitative genetic parameters. Simulations to compare the properties of parameter estimates with those of existing techniques indicate that the use of sibship reconstruction is superior to earlier methods, having lower mean square errors and showing nonsignificant downward bias. In addition, sibship reconstruction allows the estimation of population allele frequencies that account for the relationships within the sample, so prior knowledge of allele frequencies need not be assumed. Extensions to these techniques allow reconstruction of half sibships when some or all of the maternal genotypes are known.

Algorithms↗
PubMed1998

Induction of the stress response with prostaglandin A1 increases I-kappaBalpha gene expression.

I-kappaBalpha is an intracellular protein that functions as a primary inhibitor of the proinflammatory transcription factor NF-kappaB. Induction of the stress response with heat shock was previously demonstrated to induce I-kappaBalpha gene expression. Because the stress response can also be induced by nonthermal stimuli, we determined whether induction of the stress response with prostaglandin A1 (PGA1) would induce I-kappaBalpha gene expression. Treatment of human bronchial epithelium (BEAS-2B cells) with PGA1 induced nuclear translocation of heat shock factor 1, thus confirming that PGA1 induces the stress response in BEAS-2B cells. Induction of the stress response with PGA1 increased I-kappaBalpha mRNA expression in a time-dependent manner and increased I-kappaBalpha peptide expression. Transient transfection assays involving a human I-kappaBalpha promoter-luciferase reporter construct demonstrated that induction of the stress response with PGA1 activated the I-kappaBalpha promoter. Induction of the stress response with PGA1 and concomitant induction of I-kappaBalpha were associated with inhibition of TNF-alpha-mediated secretion of interleukin 8 and with inhibition of TNF-alpha-mediated nuclear translocation and activation of NF-kappaB. These data demonstrate that induction of the stress response, by a nonthermal stimulus, increases I-kappaBalpha gene expression by a mechanism involving activation of the I-kappaBalpha promoter. Coupled with previous data demonstrating heat shock-mediated induction of I-kappaBalpha gene expression, these data suggest that I-kappaBalpha may be considered to be one of the stress proteins. The functional consequences of stress response-mediated I-kappaBalpha gene expression may involve attenuation of cellular proinflammatory responses.

Cell Line, Transformed↗
PubMed1995

Identification of a heparin-binding protein using monoclonal antibodies that block heparin binding to porcine aortic endothelial cells.

The binding of heparin or heparan sulphate to a variety of cell types results in specific changes in cell function. Endothelial cells treated with heparin alter their synthesis of heparan sulphate proteoglycans and extracellular matrix proteins. In order to identify a putative endothelial cell heparin receptor that could be involved in heparin signalling, anti-(endothelial cell) monoclonal antibodies that significantly inhibit heparin binding to endothelial cells were prepared. Four of these antibodies were employed in affinity-chromatographic isolation of a heparin-binding protein from detergent-solubilized endothelial cells. The heparin-binding protein isolated from porcine aortic endothelial cells using four different monoclonal antibodies has an M(r) of 45,000 assessed by SDS/PAGE. The 45,000-M(r) heparin-binding polypeptide is isolated as a multimer. The antibody-isolated protein binds to heparin-affinity columns as does the pure 45,000-M(r) polypeptide, consistent with its identification as a putative endothelial heparin receptor.

Animals↗
PubMed1995

Microevolutionary responses in experimental populations of plants to CO2-enriched environments: parallel results from two model systems.

Despite the critical role that terrestrial vegetation plays in the Earth's carbon cycle, very little is known about the potential evolutionary responses of plants to anthropogenically induced increases in concentrations of atmospheric CO2. We present experimental evidence that rising CO2 concentration may have a direct impact on the genetic composition and diversity of plant populations but is unlikely to result in selection favoring genotypes that exhibit increased productivity in a CO2-enriched atmosphere. Experimental populations of an annual plant (Abutilon theophrasti, velvetleaf) and a temperate forest tree (Betula alleghaniensis, yellow birch) displayed responses to increased CO2 that were both strongly density-dependent and genotype-specific. In competitive stands, a higher concentration of CO2 resulted in pronounced shifts in genetic composition, even though overall CO2-induced productivity enhancements were small. For the annual species, quantitative estimates of response to selection under competition were 3 times higher at the elevated CO2 level. However, genotypes that displayed the highest growth responses to CO2 when grown in the absence of competition did not have the highest fitness in competitive stands. We suggest that increased CO2 intensified interplant competition and that selection favored genotypes with a greater ability to compete for resources other than CO2. Thus, while increased CO2 may enhance rates of selection in populations of competing plants, it is unlikely to result in the evolution of increased CO2 responsiveness or to operate as an important feedback in the global carbon cycle. However, the increased intensity of selection and drift driven by rising CO2 levels may have an impact on the genetic diversity in plant populations.

Journal Article↗
PubMed1995

Electrochemical and microstructural study of oxide films formed electrochemically at microcrystalline Al-Fe-V-Si alloys.

A recent advance in metallurgical technology has been the application of rapid solidification techniques to Al alloy production. FVS0812 is the designation given to a microcrystalline Al-based alloy consisting of 8 wt% Fe, 1 wt% V and 2 wt% Si. It is a two-phase alloy, consisting of ca. 27 vol percent of approximately spherical Fe-V-Si-rich dispersoids in an essentially pure Al matrix. The high strength, low density properties of this advanced material, and other related alloys, have not yet been realized, however, due, in part, to the inability of the alloy to form a thick, adherent, abrasion-resistant outer surface oxide film, a feature readily achieved at conventional Al alloys by normal anodizing methods. The present research has involved an electro-chemical study of oxide film growth at the 812 alloy, with the specific goals being to seek an understanding of the origin of the oxide film growth problem and ultimately to propose alternative approaches to the formation of a thick, stable oxide film at this material. The techniques used in this research have included electrochemical methodologies such as cyclic voltammetry and electrochemical impedance spectroscopy. Crucial information has been obtained through transmission electron microscopy (TEM) of ultramicrotomed specimens. Experiments were carried out initially in neutral borate solutions to characterize the compact barrier oxide film formed in this environment and expected to be present beneath the porous oxide film formed in the normal sulfuric acid anodizing medium.(ABSTRACT TRUNCATED AT 250 WORDS)

Alloys↗
PubMed1994

Short-term effect of epidermal growth factor (EGF) on sodium and glucose cotransport of isolated jejunal epithelial cells.

This study was undertaken to assess the short-term effects of EGF on sodium and glucose uptake, glucose metabolism and Na+/K(+)-ATPase activity in isolated enterocytes of rats. Jejunal cells exposed to EGF had a significantly greater total uptake of sodium compared to controls after 6 min. Kinetic analysis of glucose transport across BBMV's demonstrated similar Km values but a significant increase of the Vmax in vesicles prepared from cells first exposed to EGF as compared to controls. EGF was also associated with a significant increase in glucose metabolism of jejunal enterocytes after 15 min. The activity of Na+/K(+)-ATPase increased in jejunal enterocytes exposed to EGF. The increase in Na+/K(+)-ATPase activity of the cells following EGF exposure was not accompanied by an increase in immunodetectable total or assembled Na+/K(+)-ATPase protein. EGF's effect on enzyme activity was abolished by removing NaCl from the incubation solution, and by preincubating the enterocytes with phlorizin prior to addition of EGF. Preincubation with amiloride did not inhibit the effect of EGF on Na+/K(+)-ATPase. The results confirm that EGF promotes uptake of both sodium and glucose by the jejunal mucosal cells, and suggest the effect of EGF on glucose and sodium is mediated through the brush-border membrane glucose-sodium transporter. The increase in Na+/K(+)-ATPase activity that occurs with EGF appears to be secondary to a rise in intracellular Na+ concentration. The short-term effects of EGF on glucose and sodium transport by the small intestine may have potential therapeutic implications.

Amiloride↗
PubMed1989

An approach to the repair of avulsion of the glenohumeral ligaments in the management of traumatic anterior glenohumeral instability.

Between 1976 and 1985, we repaired avulsion of the glenohumeral ligaments in sixty-three shoulders (sixty-one patients) that had traumatic anterior glenohumeral instability. We describe the indications for operation, the operative technique, and the findings at the time of operation. We located thirty-seven patients (thirty-nine shoulders) for clinical follow-up (average, 5.49 years). One patient had recurrent anterior dislocation four years postoperatively, but no patient needed reoperation. The average range of motion was 171 degrees of forward elevation and 84 degrees of external rotation in abduction. According to the criteria of Rowe et al., 97 per cent of the results were good or excellent.

Adolescent↗
PubMed1988

Ligament-tendon fixation: analysis of a new stitch and comparison with standard techniques.

A newly devised locking loop tendon-ligament suture was evaluated for its clinical application. The suture is relatively simple to use and is particularly suited to flat structures such as the medial collateral ligament, joint capsule, and patellar tendon. It affects tension and resistance to pull out without exerting major purse stringing or bunching. In a laboratory setting, this suture technique has been compared to fixation by individual sutures and several varieties of staple fixation. Simple suture fixation was quite weak, measuring 100 newtons (N). Staple fixation is not only weaker than the ligament suture, but is more highly dependent on bone quality and is generally more variable. When employed with strong suture material, a doubled ligament suture was found to be nearly twice as strong (392 N) as staple fixation into bone (208 N) and demonstrated a mean pullout strength close to the forces observed on human anterior cruciate ligaments. In combination with a well placed ligament staple into good quality bone, fixation was further enhanced (482 N) and statistically significantly improved (P greater than .05).

Animals↗
PubMed1987

Normal and stenotic renal arteries: experimental balloon-expandable intraluminal stenting.

Elastic recoil of the vessel wall is a common cause of failure of percutaneous transluminal angioplasty in renal arteries. To oppose such recoil, balloon-expandable metal stents were implanted in artificially stenotic renal arteries in pigs and normal renal arteries in dogs and pigs. The stents were then examined angiographically and histologically at regular intervals. All stents were completely covered with endothelialized neointima in 3 weeks. There was no difference in intimal thickness between the stenotic and nonstenotic renal arteries. A large stent diameter and a large open or nonmetal surface may cause less intimal hyperplasia, but nonturbulent, fast arterial flow is probably the most important factor in ensuring long-term patency of the vessel.

Angioplasty, Balloon↗