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S Capaccioli

Publications and source records attributed to S Capaccioli.

At least 19 recordsLinked to original sources

Dielectric secondary relaxations in polypropylene glycols.

Broadband dielectric measurements of polypropylene glycol of molecular weight M(w)=400 g / mol (PPG 400) were carried out at ambient pressure over the wide temperature range from 123 to 353 K. Three relaxation processes were observed. Besides the structural alpha relaxation, two secondary relaxations, beta and gamma, were found. The beta process was identified as the true Johari-Goldstein relaxation by using a criterion based on the coupling model prediction. The faster gamma relaxation, well separated from the primary process, undoubtedly exhibits the anomalous behavior near the glass transition temperature (T(g)) which is reflected in the presence of a minimum of the temperature dependence of the gamma-relaxation time. We successfully applied the minimal model [Dyre and Olsen, Phys. Rev. Lett. 91, 155703 (2003)] to describe the entire temperature dependence of the gamma-relaxation time. The asymmetric double-well potential parameters obtained by Dyre and Olsen for the secondary relaxation of tripropylene glycol at ambient pressure were modified by fitting to the minimal model at lower temperatures. Moreover, we showed that the effect of the molecular weight of polypropylene glycol on the minimal model parameters is significantly larger than that of the high pressure. Such results can be explained by the smaller degree of hydrogen bonds formed by longer chain molecules of PPG at ambient pressure than that created by shorter chains of PPG at high pressure.

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What can we learn by squeezing a liquid?

Relaxation times tau(T,upsilon) for different temperatures, T, and specific volumes, upsilon, collapse to a master curve vs Tupsilon(gamma), with gamma a material constant. The isochoric fragility, mV, is also a material constant, inversely correlated with gamma. From these experimental facts, we obtain a three-parameter function that accurately fits tau(T,upsilon) data for several glass-formers over the supercooled regime, without any divergence of tau below Tg. Although the values of the three parameters depend on the material, only gamma significantly varies; thus, by normalizing material-specific quantities related to gamma, a universal power law for the dynamics is obtained.

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Do theories of the glass transition, in which the structural relaxation time does not define the dispersion of the structural relaxation, need revision?

Upon decreasing temperature or increasing pressure, a noncrystallizing liquid will vitrify; that is, the structural relaxation time, taualpha, becomes so long that the system cannot attain an equilibrium configuration in the available time. Theories, including the well-known free volume and configurational entropy models, explain the glass transition by invoking a single quantity that governs the structural relaxation time. The dispersion of the structural relaxation (i.e., the structural relaxation function) is either not addressed or is derived as a parallel consequence (or afterthought) and thus is independent of taualpha. In these models the time dependence of the relaxation bears no fundamental relationship to the value of taualpha or other dynamic properties. Such approaches appear to be incompatible with a general experimental fact recently discovered in glass-formers: for a given material at a fixed value of taualpha, the dispersion is constant, independent of thermodynamic conditions (T and P); that is, the shape of the alpha-relaxation function depends only on the relaxation time. If derived independently of taualpha, it is an unlikely result that the dispersion of the structural relaxation would be uniquely defined by taualpha.

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Two secondary modes in decahydroisoquinoline: which one is the true Johari Goldstein process?

Broadband dielectric measurements were carried out at isobaric and isothermal conditions up to 1.75 GPa for reconsidering the relaxation dynamics of decahydroisoquinoline, previously investigated by Richert et al. [R. Richert, K. Duvvuri, and L.-T. Duong, J. Chem. Phys. 118, 1828 (2003)] at atmospheric pressure. The relaxation time of the intense secondary relaxation tau(beta) seems to be insensitive to applied pressure, contrary to the alpha-relaxation times tau(alpha). Moreover, the separation of the alpha- and beta-relaxation times lacks correlation between shapes of the alpha-process and beta-relaxation times, predicted by the coupling model [see for example, K. L. Ngai, J. Phys.: Condens. Matter 15, S1107 (2003)], suggesting that the beta process is not a true Johari-Goldstein (JG) relaxation. From the other side, by performing measurements under favorable conditions, we are able to reveal a new secondary relaxation process, otherwise suppressed by the intense beta process, and to determine the temperature dependence of its relaxation times, which is in agreement with that of the JG relaxation.

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Relation between the alpha-relaxation and Johari-Goldstein beta-relaxation of a component in binary miscible mixtures of glass-formers.

The coupling model was applied to describe the alpha-relaxation dynamics of each component in perfectly miscible mixtures A(1-x)B(x) of two different glass-formers A and B. An important element of the model is the change of the coupling parameter of each component with the composition, x, of the mixture. However, this change cannot be determined directly from the frequency dispersion of the alpha-relaxation of each component because of the broadening caused by concentration fluctuations in the mixture, except in the limits of low concentrations of either component, x --> 0 and x --> 1. Fortunately, the coupling model has another prediction. The coupling parameter of a component, say A, in the mixture determines tau(alpha)/tau(JG), the ratio of the alpha-relaxation time, tau(alpha), to the Johari-Goldstein (JG) secondary relaxation time, tau(JG), of the same component A. This prediction enables us to obtain the coupling parameter, n(A), of component A from the isothermal frequency spectrum of the mixture that shows both the alpha-relaxation and the JG beta-relaxation of component A. We put this extra prediction into practice by calculating n(A) of 2-picoline in binary mixtures with either tri-styrene or o-terphenyl from recently published broadband dielectric relaxation data of the alpha-relaxation and the JG beta-relaxation of 2-picoline. The results of n(A) obtained from the experimental data show its change with composition, x, follows the same pattern as assumed in previous works that address only the alpha-relaxation dynamics of a component in binary mixtures based on the coupling model. There is an alternative view of the thrust of the present work. If the change of n(A) with composition, x, in considering the alpha-relaxation of component A is justified by other means, the theoretical part of the present work gives a prediction of how the ratio tau(alpha)/tau(JG) of component A changes with composition, x. The data of tau(alpha) and tau(JG) of 2-picoline mixed with tri-styrene or o-terphenyl provide experimental support for the prediction.

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Emergence of a new feature in the high pressure-high temperature relaxation spectrum of tri-propylene glycol.

We investigated dielectric relaxation of a tri-propylene glycol system under high compression. By increasing temperature and pressure we observed that a new relaxation process emerges from the low frequency tail of the structural peak. This new peak starts to be visible at about 0.5 GPa and becomes clearly evident at 1.7 GPa. However, this additional peak merges again with the structural one as the glass transition is approached, since it has a weaker temperature dependence. This finding enriches the relaxation scenario of molecular glass formers confirming that the application of very high hydrostatic pressure can favor the detection of new relaxation or otherwise unresolved processes in supercooled liquid systems.

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Adam-Gibbs model for the supercooled dynamics in the ortho-terphenyl ortho-phenylphenol mixture.

Dielectric measurements of the alpha-relaxation time were carried out on a mixture of ortho-terphenyl (OTP) with ortho-phenylphenol, over a range of temperatures at two pressures, 0.1 and 28.8 MPa. These are the same conditions for which heat capacity, thermal expansivity, and compressibility measurements were reported by Takahara et al. [S. Takahara, M. Ishikawa, O. Yamamuro, and T. Matsuo, J. Phys. Chem. B 103, 3288 (1999)] for the same mixture. From the combined dynamic and thermodynamic data, we determine that density and temperature govern to an equivalent degree the variation of the relaxation times with temperature. Over the measured range, the dependence of the relaxation times on configurational entropy is in accord with the Adam-Gibbs model, and this dependence is invariant to pressure. Consistent with the implied connection between relaxation and thermodynamic properties, the kinetic and thermodynamic fragilities are found to have the same pressure independence. In comparing the relaxation properties of the mixture to those of neat OTP, density effects are stronger in the former, perhaps suggestive of less efficient packing.

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Relation between the activation energy of the Johari-Goldstein beta relaxation and T(g) of glass formers.

For glass-forming substances, we show that the ratio E(beta)/RT(g) can be predicted quantitatively from the coupling model. Here E(beta) is the glassy state activation enthalpy of the Johari-Goldstein beta relaxation, T(g) is the glass transition temperature of the alpha relaxation, and R is the gas constant. The calculated value is in good agreement with the experimental value in many glass formers. The results locate the origin of this cross correlation between E(beta) of the Johari-Goldstein beta relaxation and T(g) of the alpha relaxation, although there are some notable exceptions to this cross correlation.

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Dynamics of supercooled and glassy dipropyleneglycol dibenzoate as functions of temperature and aging: Interpretation within the coupling model framework.

Dielectric relaxation measurements of a typical small molecular glassformer, dipropyleneglycol dibenzoate show the presence of two secondary relaxations. Their dynamic properties differ in the equilibrium liquid and glassy states, as well as the changes during structural recovery after rapid quenching the liquid to form a glass. These differences enable us to identify the slower secondary relaxation as the genuine Johari-Goldstein (JG) beta-relaxation, acting as the precursor of the primary alpha-relaxation. Agreement between the JG beta-relaxation time and the independent relaxation time of the coupling model leads to predicted quantitative relations between the JG beta-relaxation and the alpha-relaxation that are supported by the experimental data.

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Molecular dynamics study of the thermal and the density effects on the local and the large-scale motion of polymer melts: scaling properties and dielectric relaxation.

Results from a molecular dynamics simulation of a melt of unentangled polymers are presented. The translational motion, the large-scale and the local reorientation processes of the chains, as well as their relations with the so-called "normal" and "segmental" dielectric relaxation modes are thoroughly investigated in wide temperature and pressure ranges. The thermodynamic states are well fitted by the phenomenological Tait equation of state. A global time-temperature-pressure superposition principle of both the translational and the rotational dynamics is evidenced. The scaling is more robust than the usual Rouse model. The latter provides insight but accurate comparison with the simulation calls for modifications to account for both the local chain stiffness and the nonexponential relaxation. The study addresses the issue whether the temperature or the density is a dominant control parameter of the dynamics or the two quantities give rise to comparable effects. By examining the ratio /alphatau//alphaP between the isochronic and isobaric expansivities, one finds that the temperature is dominant when the dynamics is fast. If the relaxation slows down, the fluctuations of the free volume increase their role and become comparable to those of the thermal energy. Detectable cross-correlation between the "normal-mode" and the "segmental" dielectric relaxations is found and contrasted with the usual assumption of independent modes.

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Antisense oligonucleotide drug design.

Maneuvering single gene expression is not only an optimal way to study gene function but also an ambitious goal, which will lead to the treatment of a variety of human diseases whose main pathogenetic event is a genetic alteration. The recent efforts focusing on the genome project have led to array based, high throughput, gene expression analysis techniques that allow the study of complex molecular networks. Combining these powerful new technologies with modulation of gene expressions is making it possible to unravel complex molecular networks or, vice versa, to find new gene products responsible for pathological conditions on which exogenous modulation can be productive. Efficient and specific modulation of gene expression can be obtained either by producing transgenic or gene knockout organisms or cells (gene targeting), or by treating organisms or cells with short synthetic nucleic acid segments in antisense orientation with respect to the targeted mRNAs (mRNA targeting by antisense strategy). While genome manipulation is a time consuming and expensive approach, requiring invasive intervention, the "antisense strategy" is characterized by high flexibility resulting from safeness, specificity, reversibility, modulability, and low cost. The rationale of the antisense strategy is that, once one gene sequence is known, its expression can be silenced by application of synthetic single-strand nucleic acid segments (oligonucleotides) whose sequence is in antisense orientation compared to the targeted mRNA. Recently, this "informational" strategy has been boosted by the discovery of the RNA interference: a natural mechanism by which cells are thought to fight detrimental exogenous viruses and endogenous transposons. Despite promising futures, antisense-based therapeutics are far from being an established reality. This review analyses the recent improvements in antisense-based gene expression modulation, focuses on the treatment of diseases in the light of the past, and provides our personal findings on this topic.

Animals↗

The mechanisms of apoptosis in biology and medicine: a new focus for ophthalmology.

Defects in apoptosis (programmed cell death) have recently emerged as being closely involved in the pathogenesis of most ocular diseases and, therefore, apoptosis is now a topic of exponential interest in ophthalmology. This review summarizes recent works on mechanisms of apoptosis, from its initiation and modulation to the switching-on of its execution machinery. Interactions of cell death with cell division programs to orchestrate ontogenesis, aging, and adult life and their alterations in human diseases are pointed out. Two main apoptotic signaling pathways are identified: a death receptor-dependent (extrinsic) pathway and a mitochondrion-dependent (intrinsic) pathway. Mitochondrion harbors both antiapoptotic (Bcl-2, Bcl-XL) and apoptotic factors (Smac/Diablo, Apaf-1, cytochrome c). Its permeability transition pore (mPTP) is the main trigger of cell suicide. The process of mPTP opening, in association with extrusion to cytoplasm of a variety of apoptotic factors, is shown. Cytochrome c is one of these apoptotic factors. When expelled to cytoplasm, this double-faced respiratory chain component assembles with two other modules, Apaf-1 and procaspase 9, to form a protein complex--the apoptosome--that starts apoptosis execution. Another respiratory chain component, the CoQ10, is believed to counteract mPTP opening. What makes apoptosis particularly exciting for medicine is that its dysfunctions play a central role in the pathogenesis of several human diseases. For instance, excesses of apoptosis lead to cell loss that accompanies neurodegenerative diseases, whereas genetically determined defects of apoptosis lead to the deregulated cell proliferation typical of cancer. A variety of ophthalmologic diseases, such as post-keratectomy haze, corneal lesions, cataract, glaucoma, senile maculopathies, and genetic ocular pathologies, that underlie apoptosis dysfunctions are treated in detail in the other reviews of this issue.

Animals↗

Relaxation processes in an epoxy resin studied by time-resolved optical Kerr effect.

The dynamics of the epoxy resin phenyl glycidyl ether, a fragile glass-forming liquid, is investigated in the liquid and supercooled phases by time-resolved optical Kerr effect experiment with an heterodyne detection technique. We tested the mode-coupling theory and found that the predicted dynamic scenario allows to reproduce properly the measured signal, for t>1 ps, in the whole temperature interval investigated. Furthermore, the values of T(c) and lambda, obtained from the analysis of three different and independent dynamic regimes (alpha regime, von Schweidler, beta regime), are in remarkable agreement. Moreover, relaxation times obtained from optical Kerr effect and dielectric spectroscopy measurements are compared. The two time scales differ only for a constant factor in the whole temperature interval investigated.

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Apoptosis is associated with modifications of bcl-2 mRNA AU-binding proteins.

The expression of genes requiring finely tuned control is regulated by a posttranscriptional mechanism involving mRNA A + U-rich elements (AREs) cooperating with ARE-binding proteins (AUBPs) in modulation of mRNA stability. We reported previously that an ARE in the bcl-2 mRNA 3'-untranslated region (3'-UTR) had destabilizing activity and was involved in bcl-2 downregulation during apoptosis in vitro. Here we demonstrate that the bcl-2 ARE complexes with a number of specific AUBPs, whose pattern undergoes changes following application of apoptotic stimuli. The caspase inhibitor Z-VAD-fmk strongly attenuates both bcl-2 mRNA decay and bcl-2 AUBP pattern changes elicited by apoptotic stimuli, indicating the involvement of bcl-2 AUBPs in bcl-2 mRNA stability control.

3' Untranslated Regions↗

Damaged microtubules can inactivate BCL-2 by means of the mTOR kinase.

Rapamycin, a specific inhibitor of the serine/threonine mTOR kinase, markedly inhibited both cell growth and apoptosis in human B-cell lines. Besides arresting cells in G(1) by increasing p27(kip1), rapamycin tripled the cellular level of the BCL-2 protein. The activity was dose-dependent and specific for the p27(kip1) and BCL-2 proteins. Rapamycin did not affect bcl-2 mRNA although it increased cellular BCL-2 concentration by inhibiting phosphorylation, a mechanism initiating the decay process. To add new insight, we combined rapamycin treatment with treatment by taxol, which, by damaging microtubules, can phosphorylate BCL-2 and activate apoptosis. It was found that the mTOR kinase was activated in cells treated with taxol or with nocodazole although it was inhibited in cells pre-treated with rapamycin. BCL-2 phosphorylation, apoptosis and hyperdiploidy were also inhibited by rapamycin. In contrast, taxol-induced microtubule stabilization or metaphase synchronization were not inhibited by rapamycin. Taken together, these findings indicate that mTOR belongs to the enzymatic cascade that, starting from damaged microtubules, phosphorylates BCL-2. By regulating apoptosis, in addition to the control of a multitude of growth-related pathways, mTOR plays a nodal role in signaling G(1) and G(2)-M events.

Apoptosis↗

Effect of pressure on the dynamics of glass formers.

A description of the pressure dependence of the structural relaxation time has been derived from the Adam-Gibbs theory by writing the configurational entropy in terms of the excess heat capacity and the molar thermal expansion. This new equation was tested successfully on dielectric relaxation data for an epoxy compound over a wide range of temperature and pressure.

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Pressure dependence of structural relaxation time in terms of the Adam-Gibbs model.

A new equation describing the behavior of the structural relaxation time, tau(T,P), as a function of both pressure and temperature, is discussed. This equation has been derived from the Adam-Gibbs theory by writing the configurational entropy, S(c), in terms of the excess thermal heat capacity and of the molar thermal expansion. Consequently, the parameters introduced in the expression are directly related to specific physical properties of the material, such as the thermal expansion coefficient alpha and the isothermal bulk modulus K0. At a fixed pressure, for low pressures, the found equation reduces to a Vogel-Fulcher-Tammann equation of tau versus temperature with the fragility parameter independent from pressure. The equation for tau(T,P) was successfully tested directly by fitting the dielectric relaxation time data for two isothermal and one isobaric measurements on diglycidyl ether of bisphenol-A, carried out in previous experiments. The parameters estimated by the best fit were in reasonable agreement with the values determined from the known physical properties of the material. Finally, the expression for the change versus pressure of the temperatures at which the same value of tau(max) is obtained (e.g., the change versus pressure of the glass transition temperature) agrees with several expressions previously proposed in the literature to provide a phenomenological description of the observed phenomena.

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Induction of apoptosis and mitosis inhibition by degraded DNA lipotransfection mimicking genotoxic drug effects.

Genotoxic damage induces cell cycle arrest and/or apoptosis by activation of p53 oncosuppressor protein. A number of anticancer drugs are genotoxic and their damaging effect upon cells is mediated by this mechanism. Microinjection of defined DNA species directly into nucleus has been reported previously to activate p53 and inhibit cell cycle. Here, we demonstrate that simple addition of heterogeneous degraded DNA to cultured cells (Rat-1 fibroblasts) in combination with lipotransfecting agent DOTAP leads to apoptosis induction and mitosis inhibition by a molecular mechanism which mimics that of the cellular response to genotoxic anticancer agents. Indeed, both cellular effects induced by lipotransfected degraded DNA (essentially, heterogeneous small DNA fragments) are associated to p53 activation and modulated by two apoptosis-related genes, such as bcl-2 and c-myc, which also modulate the apoptotic threshold to anticancer agents. Here we raise the hypothesis of exogenous DNA segment lipotransfection as possible new tool for anticancer therapy.

Animals↗