Biomedical subjects

S J Doran

Publications and source records attributed to S J Doran.

7 recordsLinked to original sources

PubMed2001

A CCD-based optical CT scanner for high-resolution 3D imaging of radiation dose distributions: equipment specifications, optical simulations and preliminary results.

Methods based on magnetic resonance imaging for the measurement of three-dimensional distributions of radiation dose are highly developed. However, relatively little work has been done on optical computed tomography (OCT). This paper describes a new OCT scanner based on a broad beam light source and a two-dimensional charge-coupled device (CCD) detector. A number of key design features are discussed including the light source; the scanning tank, turntable and stepper motor control; the diffuser screen onto which images are projected and the detector. It is shown that the non-uniform pixel sensitivity of the low-cost CCD detector used and the granularity of the diffuser screen lead to a serious ring artefact in the reconstructed images. Methods are described for eliminating this. The problems arising from reflection and refraction at the walls of the gel container are explained. Optical ray-tracing simulations are presented for cylindrical containers with a variety of radii and verified experimentally. Small changes in the model parameters lead to large variations in the signal intensity observed in the projection data. The effect of imperfect containers on data quality is discussed and a method based on a 'correction scan' is shown to be successful in correcting many of the related image artefacts. The results of two tomography experiments are presented. In the first experiment, a radiochromic Fricke gel sample was exposed four times in different positions to a 100 kVp x-ray beam perpendicular to the plane of imaging. Images of absorbed dose with slice thickness of 140 microm were acquired. with 'true' in-plane resolution of 560 x 560 microm2 at the edge of the 72 mm field of view and correspondingly higher resolution at the centre. The nominal doses measured correlated well with the known exposure times. The second experiment demonstrated the well known phenomenon of diffusion in the dosemeter gels and yielded a value of (0.12 +/- 0.02) mm2 s(-1) for the diffusion coefficient of the xylenol orange/iron complex. Finally, the overall implications of the above findings for dosimetry using OCT are discussed.

Dose-Response Relationship, Radiation↗

PubMed2000

Burst excitation for quantitative diffusion imaging with multiple b-values.

A quantitative imaging sequence has been developed to exploit the intrinsic sensitivity of Burst NMR data to molecular diffusion. In the scan time of a single spin echo experiment, it is possible to acquire many images of the same slice, with a different T(2) and diffusion weighting. Under favorable conditions, it is possible to obtain both the diffusion coefficient and T(2) from the same experiment; or, by correcting for T(2) relaxation using a control image, more precise diffusion coefficients may be measured. The quantitative values in rat brain are in agreement with those from conventional experiments. The major gains of this method are the potentially reduced scan time, the higher number of acquired images corresponding to different diffusion weightings, the reduced sensitivity to inter-scan motion artifact and to local variations in magnetic susceptibility, and an automatic co-registration between T(2) and diffusion images. Problems with the sequence include a lower signal-to-noise ratio than is achievable with diffusion-weighted spin-echo imaging, the limitation of measuring only in-plane components of diffusion and, at present, single-slice acquisition.

Animals↗

PubMed2000

Burst imaging: rotation artifacts and how to correct them.

The effect of coherent rotational motion on images acquired with the ultrafast single-shot spin-echo Burst sequence has been analyzed. Previous experience has demonstrated that sample rotation during Burst experiments has the potential to cause severe image artifacts. In this paper we show that no distortions are visible when the readout gradient is parallel to the rotation axis, but that there is a very distinctive behavior for the case of the rotation axis orthogonal to the imaging plane. The mathematical expression that describes the resulting signal is presented and is used as a basis for a method of correcting the k-space data. The conditions under which undistorted images may be recovered are discussed. It is shown that there is an asymmetry, dependent on the rotation direction, in both the manifestation of the artifact and the range of angular velocities over which one can correct the images. Data from an agar gel phantom rotating at a known rate are used to show how the theory is successful at reconstructing images, with no free parameters. The range of angular velocities over which correction is possible depends on the timing parameters of the pulse sequence, but for these data was -0.016 < omega less, similar 0.1 revolutions/s. Volunteer experiments have confirmed that the theory is applicable to patient motion and can correct motional distortion even when the exact rate is not known a priori. By optimizing the reconstruction to restore a known sample geometry/aspect ratio, an estimate of the rotation angular frequency is obtained with a precision of +/-10%.

Artifacts↗

PubMed1999

Dynamics of polymerization in polyacrylamide gel (PAG) dosimeters: (II) modeling oxygen diffusion.

Oxygen contamination of a polyacrylamide gel (PAG) dosimeter can have a significant detrimental effect upon the performance characteristics of the gel as a dosimeter. Oxygen contamination can occur during preparation, but can also arise from the diffusion of atmospheric oxygen through vessel walls. Even 'trace' amounts of oxygen present in any gaseous space (usually nitrogen filled) between the surface of the PAG and the vessel seal can have a detectable effect. This paper describes a method used to quantify the detrimental effects of a range of oxygen concentrations upon the performance of the PAG. The results of diffusion studies for air and pure oxygen diffusing into the PAG over time are presented and coupled with a novel method of calculating oxygen concentrations in the PAG. Results obtained suggest that the diffusion is Fickian. The coefficient of diffusion D has been calculated to be (8+/-2) x 10(-6) cm2 s(-1) for oxygen diffusing into PAG stored at 4 degrees C, under the assumption that the diffusion mechanism is independent of the concentration of the diffusing species. In addition, a quantitative relation has been established between the transverse relaxation rate R2 of the PAG and the concentration of oxygen present. The implications of these findings for polymer gel dosimetry are discussed.

Acrylic Resins↗

PubMed1997

STEAM-Burst: a single-shot, multi-slice imaging sequence without rapid gradient switching.

The stimulated-echo acquisition mode-Burst sequence is a single-shot, multi-slice imaging technique that does not involve rapid gradient switching. A Burst excitation pulse train is followed by a 90 degrees hard pulse and, after a mixing time, by a 90 degrees slice-selective pulse. A read gradient refocuses a set of stimulated echoes, which can be phase-encoded to form an image. By repeating the selective pulse N times, each time with the carrier frequency offset differently, it is possible to sample N slices in a single-shot. A comparison is made of the sequence with other three-dimensional single-shot methods. Experiments implementing the technique on a 3 T whole-body imaging system and a 2 T, 31-cm bore animal imager are described. Both phantom and brain images are presented. The principal advantages of the new sequence are its speed, the absence of rapid gradient switching and corresponding freedom from artifacts, its insensitivity to static magnetic field inhomogeneities, and its low acoustic noise. The main disadvantages are the low signal-to-noise ratio of the images produced and the concomitant limitation in resolution.

Animals↗

PubMed1996

Rapid repetition of the "burst" sequence: the role of diffusion and consequences for imaging.

When the Burst pulse sequence (Hennig et al. MAGMA 1, 39-48 (1993)) is applied with elementary pulses of finite flip angle, a non-uniform longitudinal magnetization is created, in the form of a series of fine bands of saturated spins. Both during and after the pulse train, the molecules contained within these bands diffuse. In this paper a full description is given of the evolution of the non-uniform longitudinal magnetization subsequent to the pulse train and the theory is verified experimentally. The value of the diffusion coefficient influences strongly the signal obtained when the Burst sequence is repeated rapidly. The consequences of this for imaging are discussed and, in particular, for the so-called "frequency-shifted" Burst technique.

Humans↗

PubMed1995

Echo-time-encoded burst imaging (EBI): a novel technique for spectroscopic imaging.

A new technique for rapid spectroscopic imaging is presented. The proposed experiment enables a complete mapping of the two-dimensional reciprocal space kx, k sigma, and thus the acquisition of a 1D spectroscopic image in a single scan. The properties of the pulse sequence, based on the use of a burst of low flip angle pulses, are analyzed in the framework of linear response theory, and it is shown that chemical shift information may be introduced into the spatially encoded echoes. First experimental results are presented demonstrating that 32 x 32 proton spectroscopic images may be acquired within less than 1 min with a conventional imaging system.

Humans↗