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S J O'Brien

Publications and source records attributed to S J O'Brien.

420 records · Page 24Linked to original sources

Molecular genetic divergence of orang utan (Pongo pygmaeus) subspecies based on isozyme and two-dimensional gel electrophoresis.

The orang utan (Pongo pygmaeus), as currently recognized, includes two geographically separated subspecies: Pongo pygmaeus pygmaeus, which resides on Borneo, and P. p. abelii, which inhabits Sumatra. At present, there is no known route of gene flow between the two populations except through captive individuals which have been released back into the wild over the last several decades. The two subspecies are differentiated by morphological and behavioral characters, and they can be distinguished by a subspecies specific pericentric chromosomal inversion. Nei-genetic distances were estimated between orang utan subspecies, gorilla, chimpanzee and humans using 44 isozyme loci and using 458 soluble fibroblast proteins which were resolved by two-dimensional gel electrophoresis. Phenetic analysis of both data sets supports the following conclusions: the orang utan subspecies distances are approximately 10 times closer to each other than they are to the African apes, and the orang utan subspecies are approximately as divergent as are the two chimpanzee species. Comparison of the genetic distances to genetic distance estimates done in the same laboratory under identical conditions reveals that the distance between Bornean vs. Sumatran orang utans is 5-10 times the distance measured between several pairs of subspecies including lions, cheetahs, and tigers. Near species level molecular genetic distances between orang utan subspecies would support the separate management of Bornean and Sumatran orang utans as evolutionary significant units (Ryder 1987). Evolutionary topologies were constructed from the distance data using both cladistic and phenetic methods. The majority of resulting trees affirmed previous molecular evolutionary studies that indicated that man and chimpanzee diverged from a common ancestor subsequent to the divergence of gorilla from the common ancestor.

Animals↗

The avian and mammalian ets genes: molecular characterization, chromosome mapping, and implication in human leukemia.

The mammalian homologs of the ets-region from the transforming gene of avian erythroblastosis virus, E26, consist of two distinct domains located on different chromosomes. Using somatic cell hybrid panels, the mammalian homologs of the 5' v-ets-domain, ets-1, were mapped to chromosome 11 in man, to chromosome 9 in mouse, and to chromosome D1 in cat. The mammalian homologs of the 3'v-ets domain, ets-2, were similarly mapped to human chromosome 21, to mouse chromosome 16, and to feline chromosome C2. We conclude that the ets sequence shared by the virus, chicken, and man is likely to contain at least two functionally dissociable domains, identifiable as ets-1 and ets-2. The human ets- locus is transcriptionally active and encodes a single mRNA of 6.8 kb, while the second locus, human ets-2 encodes three mRNAs of 4.7, 3.2 and 2.7 kb. By contrast, the chicken homolog, having a contiguous ets-1 and ets-2 sequence, is primarily expressed in normal chicken cells as a single 7.5 kb mRNA. Because chromosome translocations have been associated with different human hematopoietic malignancies, we have used our human probes to study specific translocations occurring in acute leukemias. The human ets- gene was found to translocate from chromosome 11 to 4 in t(4;11) (q21;23) and the human ets-2 gene was found to translocate from chromosome 21 to 8 in t(8;21) (q22;q22). Significantly, both translocations were associated with an expression of ets genes which differed from that found in normal diploid lymphoid cells.

Acute Disease↗

Mycoplasma hominis- tissue cell interactions: a review with new observations on phenotypic and genotypic properties.

Strains of Mycoplasma hominis isolated from different tissues of patients with a variety of disease processes and from cell culture substrates show marked phenotypic and genotypic heterogeneity, as determined by their antigenic and isozyme properties and by [3H]DNA-DNA hybridization and DNA cleavage pattern analyses. Strains isolated from the same tissues (blood of postpartum patients or human urogenital tract or cell culture substrates) have very high genomic homology and form clusters of similar strains. Clusters of strains that colonize similar specialized urogenital tissues may initiate diseases that reflect damage to the particular tissue colonized. Antigenic markers such as those for attachment components for different strain clusters may help determine the role, if any, played by strain differences in the etiology of a family of urogenital diseases.

Adhesiveness↗

On the distribution and characteristics of isozyme expression in Mycoplasma, Acholeplasma, and Ureaplasma species.

A summary of a survey of three genera of mycoplasmatales (Mycoplasma, Acholeplasma, and Ureaplasma) for isozyme expression is presented. Isozyme analysis of mycoplasmas has been employed in at least three distinct areas: (1) as genetic markers for identification, individualization, and taxonomic classification; (2) as markers for cell culture contamination; and (3) as a qualitative measure of the operative metabolic pathways in the diverse species. We have found five ubiquitous enzymes: purine nucleoside phosphorylase, adenylate kinase, inorganic pyrophosphatase, dipeptidase, and esterase. Three enzymes, glucose-6-phosphate dehydrogenase, phosphogluconate dehydrogenase, and superoxide dismutase, were restricted to Acholeplasma species and were not detected in Mycoplasma or Ureaplasma. Four glycolytic enzymes, glucose phosphate isomerase, triose phosphate isomerase, glyceraldehyde-3-phosphate dehydrogenase, and lactate dehydrogenase, were restricted to those species of Mycoplasma and Acholeplasma capable of glucose fermentation. Two of these glycolytic enzymes, glucose phosphate isomerase and lactate dehydrogenase, were detected in serovars I and II of U. urealyticum, which is inconsistent with the non-glycolytic activity in this genus.

Acholeplasma↗

Linkage disequilibrium in admixed populations: applications in gene mapping.

A method to detect linkage of genetic traits to polymorphic DNA markers in outbred populations when pedigree analysis is not feasible is presented. The procedure takes advantage of increased linkage disequilibrium that occurs when isolated races or subspecies mate and interbreed. By selecting restriction fragment length polymorphism (RFLP) or microsatellite marker loci that have different allele frequencies in admixed populations, genetic associations produced de novo by hybridization will persist as a function of theta (map distance) for 10-20 generations after initial interbreeding. By careful selection of loci and study populations, the procedure detects linkage of traits otherwise refractory to linkage analysis.

Alleles↗