PubMed Health⌕ Search

Biomedical subjects

S M Tiquia

Publications and source records attributed to S M Tiquia.

11 recordsLinked to original sources

Stability in a denitrifying fluidized bed reactor.

This study evaluates changes in the microbial community structure and function of a pilot-scale denitrifying fluidized bed reactor during periods of constant operating conditions and periods of perturbation. The perturbations consisted of a shutdown period without feed, two disturbances in which biofilms were mechanically sheared from carrier particles, and a twofold step increase in feed nitrate concentration. In the absence of perturbations, nitrate removal was stable and consistently greater than 99%. The structure and dynamics of the microbial community were studied using cloning and sequencing techniques and terminal restriction fragment length polymorphism (T-RFLP) of the SSU rRNA gene. Under unperturbed operating conditions, stable function was accompanied by high constancy and low variability of community structure with the majority of terminal restriction fragments (T-RFs) appearing throughout operation at consistent relative abundances. Several of the consistently present T-RFs correlated with clone sequences closely related to Acidovorax (98% similarity), Dechloromonas (99% similarity), and Zoogloea (98% similarity), genera recently identified by molecular analyses of similar systems. Significant changes in community structure and function were not observed after the shutdown period. In contrast, following the increase in loading rate and the mechanical disturbances, new T-RFs appeared. After both mechanical disturbances, function and community structure recovered. However, function was much more resilient than community structure. The similarity of response to the mechanical disturbances despite differences in community structure and operating conditions suggests that flexible community structure and potentially the activity of minor members under nonperturbation conditions promotes system recovery.

Biodegradation, Environmental↗

Microbial community dynamics in manure composts based on 16S and 18S rDNA T-RFLP profiles.

Compost processing is assumed to be related to the microbial communities present. However, methods that will evaluate these relationships are not well understood. In this study, terminal restriction fragment length polymorphism (T-RFLP) analysis was used to evaluate the diversity of PCR-amplified bacterial 16S and fungal 18S rDNA communities from manure composts at different stages of composting (initial [day 0], thermophilic [day 24], and mature [day 104]). Results showed that the bacterial and fungal community profiles changed over the composting process, with bacterial communities showing a higher diversity compared with the fungal communities. During the thermophilic stage (day 24), the diversity of the bacterial communities increased, while the fungal communities decreased. As the compost reached maturity (day 104), a reverse pattern was observed between the diversity of bacterial and fungal communities. That is, the 18S rDNA T-RFLP-based diversity indices increased, while the 16S rDNA T-RFLP-based diversity decreased. Differences in temperature profiles at different stages of composting impacted the chemical properties and the diversity of the microbial communities. The day 104 compost (mature) had lower water, organic matter and C contents and higher C and OM loss compared with the day 0 (initial) and day 24 (thermophilic) composts, which affected the diversity of the microbial communities. The results presented here demonstrated that distinctive community patterns from manure composts could be rapidly generated using T-RFLP analysis. The succession of peaks in combination of increasing and decreasing peak heights at different stage of composting indicates the high potential of T-RFLP technique to monitor the dynamics of microbial communities, and their variation qualitatively and quantitatively.

Animals↗

Microbiological parameters as indicators of compost maturity.

AIMS: The objectives of this study were to determine the changes of microbial properties of pig manure collected from pens with different management strategies and composted using different turning and moisture regimes; relate their association with humification parameters and compost temperature; and identify the most suitable microbial indicators of compost maturity. METHODS AND RESULTS: Six different microbial parameters, including total bacterial count, oxygen consumption rate, ATP content, dehydrogenase activity, and microbial biomass C and N, along with humification parameters [humic acid (HA), fulvic acid (FA) and HA : FA ratio] and compost temperature were monitored during composting. Significant positive correlations were found between temperature and microbial properties, including O2 consumption rate, ATP content, dehydrogenase activity, and microbial biomass N. The humification parameters also showed significant correlations with microbial properties of the manure compost. For instance, HA contents of pig manures was positively correlated with total aerobic heterotrophs, and microbial biomass N and C; and negatively correlated with O2 consumption rate, ATP content, and dehydrogenase activity. Among the six microbial parameters examined, dehydrogenase activity was the most important factor affecting compost temperature and humification parameters. Composting strategies employed in this study affected the speed of composting and time of maturation. If the moisture content is maintained weekly at 60% with a 4-day turning frequency, the pig manure will reach maturity in 56 days. CONCLUSIONS: The composting process went through predictable changes in temperature, microbial properties and chemical components despite differences in the initial pig manure and composting strategies used. Among the six microbial parameters used, dehydrogenase activity is the most suitable indicator of compost maturity. Compared with respiration rate, ATP content and microbial biomass procedures, dehydrogenase activity is the simplest, quickest, and cheapest method that can be used to monitor the stability and maturity of composts. SIGNIFICANCE AND IMPACT OF THE STUDY: The results presented here show that microbial parameters can be used in revealing differences between composts and compost maturity. The statistical relationship established between humification parameters and microbial parameters, particularly dehydrogenase activity, demonstrates that it is possible to monitor the composting process more easily and rapidly by avoiding longer and more expensive analytical procedures.

Adenosine Triphosphate↗

Bacterial community profiles on feathers during composting as determined by terminal restriction fragment length polymorphism analysis of 16S rDNA genes.

Composting is one of the more economical and environmentally safe methods of recycling feather waste generated by the poultry industry, since 90% of the feather weight consists of crude keratin protein, and feathers contain 15% N. However, the keratin in waste feathers is resistant to biodegradation and may require the addition of bacterial inocula to enhance the degradation process during composting. Two keratin-degrading bacteria isolated from plumage of wild songbirds and identified as Bacillus licheneformis (OWU 1411T) and Streptomyces sp. (OWU 1441) were inoculated into poultry feather composts (1.13 x 10(8) cfu g(-1) feathers) and co-composted with poultry litter and straw in 200-l compost vessels. Composting temperatures, as well as CO(2) and NH(3) evolution, were measured in these vessels to determine the effects of inoculation on the rate and extent of poultry feather decomposition during composting. Terminal restriction fragment length polymorphisms of 16S rRNA genes were used to follow changes in microbial community structure during composting. The results indicated that extensive carbon conversion occurred in both treatments (55.5 and 56.1%). The addition of the bacterial inocula did not enhance the rate of waste feather composting. The microbial community structure over time was very similar in inoculated and uninoculated waste feather composts.

Ammonia↗

Evaluation of organic matter and nutrient composition of partially decomposed and composted spent pig litter.

Characterization of soil-applied organic material is necessary in order to clarify the nature of the organic matterand nutrients in it. In this study, the organic matter and nutrient contents of the spent pig litter (a mixture of partially decomposed pig manure and sawdust) was characterized before and after windrow composting to: (1) determine their changes during composting, and (2) assess the suitability of the composted spent litter as a soil amendment. Results demonstrated that the time required to reach maturity, and the composition of composted spent litter, depended on the chemical properties of the initial compost feedstock as well as the compost strategies used during composting. Total N, P, and K concentrations of the composted litter depended on chemical properties of the initial material. On the other hand, C:N ratio, humic and fulvic acid and cation-exchange capacity were influenced by differences in composition of the initial spent litter and composting strategy. If moisture content was maintained weekly at 60% with a four-day turning frequency, the litter reached maturity in 56 days. Maturation of spent litter was accompanied by a decline in total C, water-extractable metals, NH(4)(+)-N, increase in ash, (NO(3)(-)+NO(2)(-)-N, humic acid, humic acid:fulvic acid ratio, and cation exchange capacity, and elimination of phytotoxicity. The stability of nutrient and organic matter, acceptable pH and electrical conductivity values, and low levels of undesirable components such as heavy metals and phytotoxic compounds of the spent litter provided substantial evidence that agronomically suitable compost can be obtained after composting in windrows.

Animals↗

Evolution of extracellular enzyme activities during manure composting.

AIMS: The objectives of this work were to determine the extracellular enzyme profiles during composting, relate the activities of these enzymes to the changes in microbial population and compare the enzyme profiles between two manures. METHODS AND RESULTS: API ZYM assay was used to monitor the activities of 19 extracellular enzymes during poultry and pig manure composting. Results showed an overall increase in diversity and relative abundance of enzymes present. The relative abundance and activities of enzymes were higher in poultry manure than in pig manure. Among the 19 enzymes tested, esterase, valine amino-peptidase and alpha-galactosidase were the most abundant enzymes in poultry manure, whereas it was N-acetyl-beta-glucosaminidase for the pig manure. A number of these enzymes correlated with change in numbers of different microbial groups during composting. CONCLUSIONS: The composting process represented a combined activity of a wide succession of environments, as one enzyme/microbial group overlapped the other and each emerged gradually due to the continual change in temperature and progressive breakdown of complex compounds to simpler ones. SIGNIFICANCE AND IMPACT OF THE STUDY: The results presented here show the applicability of the API ZYM test not only in monitoring the quantitative and qualitative fluctuation of the available substrate during composting, but also in revealing differences in composts and compost maturity.

Actinomycetales↗

Fate of nitrogen during composting of chicken litter.

Chicken litter (a mixture of chicken manure, wood shavings, waste feed, and feathers) was composted in forced-aeration piles to understand the changes and losses of nitrogen (N) during composting. During the composting process, the chemical [different N fractions, organic matter (OM), organic carbon (C), and C:N ratio], physical, and microbial properties of the chicken litter were examined. Cumulative losses and mass balances of N and organic matter were also quantified to determine actual losses during composting. The changes in total N concentration of the chicken litter piles were essentially equal to those of the organic N. The inorganic N concentrations were low, and that organic N was the major nitrogenous constituent. The ammonium (NH(4)(+))-N concentration decreased dramatically during first 35 days of composting. However, the rapid decrease in NH(4)(+)-N during composting did not coincide with a rapid increase in (NO(3)(-)+NO(2)(-))-N concentration. The concentration of (NO(3)(-)+NO(2)(-))-N was very low (<0.5 g kg(-1)) at day 0, and this level remained unchanged during the first 35 days of composting suggesting that N was lost during composting. Losses of N in this composting process were governed mainly by volatilization of ammonia (NH(3)) as the pile temperatures were high and the pH values were above 7. The narrow C:N ratio (<20:1) have also contributed to losses of N in the chicken litter. The OM and total organic C mass decreased with composting time. About 42 kg of the organic C was converted to CO(2). On the other hand, 18 kg was lost during composting. This loss was more than half (59%) of the initial N mass of the piles. Such a finding demonstrates that composting reduced the value of the chicken litter as N fertilizer. However, the composted chicken contained a more humified (stabilized) OM compared with the uncomposted chicken litter, which would enhance its value as a soil conditioner.

Journal Article↗

Composting of spent pig litter in turned and forced-aerated piles.

A study was carried out to compare the compositing efficiency of spent litter (a mixture of partially decomposed pig manure and sawdust) in turned and forced-aerated piles. Duplicate piles were built with manual turning (every 4 days) during composting, and duplicate piles were set up with forced aeration using an air pump. The present study demonstrated that the efficiency of composting in the turned and forced-aerated piles was similar. Spent litter in these piles reached maturity at the same time (60 days). The forced-aerated piles went through similar physical, chemical, and microbial changes with the turned piles during composting. The forced-aerated composting system was also as effective as the turned system in eliminating Salmonella sp. in the spent litter. These results suggest that a forced-aerated composting system could be used as an alternative method in composting spent litter. The similarities in temporal changes in temperature, chemical, and microbiological properties of the forced-aerated piles, compared with the turned piles, indicate that addition of a bulking agent under forced aerated composting of spent litter is not necessary. The partially decomposed sawdust in the spent litter provided enough free air space, allowing the delivery of oxygen for the microorganisms in the spent litter piles.

Journal Article↗

Effects of bacterial inoculum and moisture adjustment on composting of pig manure.

Spent litter (a mixture of partially composted pig manure and sawdust) was taken from pig pens employing the pig-on-litter system with and without the addition of a commercial bacterial product (Odor control (OC)-organic fertilizers (OF)). A duplicate series of windrows was set up with spent litter which contained the bacterial product and a further duplicate series was set up with spent litter which did not contain the bacterial product. All four sets had their initial moisture content adjusted to 60% but one of each duplicate pair had its moisture content adjusted to 60% during the entire period of further composting in windrows. The rate of further (windrow) composting was significantly different in the litter which contained no bacterial product and which only had its moisture content adjusted at the beginning of the experiment. Decomposition was incomplete in this set even after day 91. In the three other sets, the rate of decomposition was faster and the spent litter became stabilised by day 56. This result suggests that if the bacterial product has been added during the initial pig-on-litter composting process, moisture adjustment during further (windrow) composting is not important. Conversely, if moisture was adjusted during further composting, the addition of bacterial product during initial pig-on-litter composting would be of no value. Such a finding is of remarkable significance in the further composting of spent litter since this indicates that the process could be run on a much more economical basis.

Journal Article↗

Composting of spent pig litter at different seasonal temperatures in subtropical climate.

To investigate the effects of seasonal temperatures on the composting of spent pig-manure sawdust litter (spent litter), two sets of experiments were carried out: one during winter, the other during summer. Physicochemical and microbial parameters including temperature, pH, inorganic N, humification indicators (HA and FA), heavy metals (Cu and Zn), total aerobic heterotrophs, ATP content and dehydrogenase activity were measured to understand changes in the spent litter during composting. Results demonstrated that the composting was faster during summer than winter. The spent litter during the summer trial reached maturity at day 56 whereas that of the winter trial was still immature at the end of composting (days 91). Microbial activities during the thermophilic stage of composting were much lower in the winter trial. Values began to increase during the latter part of composting, indicating that the spent litter in this winter trial was biologically unstable and must be further composted to reach full maturity. The changes in the microbial activities of the spent litter during summer or winter reflected the changes in their temperatures and chemical properties. The maturation of the spent litter during summer was accompanied by stabilization of the microbial and chemical properties and a drop in temperature to ambient level. Results of correlation analysis showed that temperature correlated not only with the microbial parameters but also with most of the chemical parameters. These parameters also correlated with each other. Among all the parameters measured, the trend of temperature changes is the simplest and most rapid parameter that can be used to evaluate the maturity of spent litter.

Journal Article↗

Effects of composting on phytotoxicity of spent pig-manure sawdust litter.

The phytotoxicity of spent pig-manure sawdust litter (spent litter) was evaluated during further composting. Aqueous extracts of the spent litter were prepared by shaking the sample with water (1:10 w/v), and the toxicity of these extracts was determined on relative seed germination, relative root elongation and germination index (GI, a factor of relative seed germination and relative root elongation). The sensitivity of six plant species, namely Brassica parachinensis (Chinese cabbage), Brassica albogalera (Chinese kale), Allium sativum (onion), Cucumis sativus (cucumber), Amaranthus espinosus (Chinese spinach), and Lycopersicon esculentum (tomato) were compared. The effect of different moisture levels during composting on the phytotoxicity of the spent litter was also examined. Phytotoxicity of the spent litter was only evident during the earlier stage of composting (first 14 days) and, that seed germination and root elongation reached 100% (same as the control) towards the end of the composting. The concentrations of the major inhibitors, water-extractable Cu and Zn, and NH4(+)-N of the spent litter, declined during composting, indicating that these inhibitors were gradually eliminated as composting proceeded. Multiple regression analysis showed that the NH4(+)-N content of the spent litter was the most important chemical factor affecting phytotoxicity of the plant species selected for this study. Relative root elongation and GI were more sensitive indicators of phytotoxicity than seed germination. In the present study, the GI's of all plant species were >80% at day 60, indicating that the spent litter had reached its maturation by day 60. The responses of different plant species to the water-extracts of the spent litter were different. Among the six species, Chinese cabbage and Chinese spinach were the most sensitive species, and tomato and cucumber were the least sensitive species to indicate phytotoxicity of the spent litter. Moisture adjustment during the composting process did not affect the results of the phytotoxicity test.

Journal Article↗