Biomedical subjects

Sonny S Mark

Publications and source records attributed to Sonny S Mark.

5 recordsLinked to original sources

PubMed2006

Bionanofabrication of metallic and semiconductor nanoparticle arrays using S-layer protein lattices with different lateral spacings and geometries.

Two-dimensional (2-D) surface layer (S-layer) protein lattices isolated from the gram-positive bacterium Deinococcus radiodurans and the acidothermophilic archaeon Sulfolobus acidocaldarius were investigated and compared for their ability to biotemplate the formation of self-assembled, ordered arrays of inorganic nanoparticles (NPs). The NPs employed for these studies included citrate-capped gold NPs and various species of CdSe/ZnS core/shell quantum dots (QDs). The QD nanocrystals were functionalized with different types of thiol ligands (negative- or positive-charged/short- or long-chain length) in order to render them hydrophilic and thus water-soluble. Transmission electron microscopy, Fourier transform analyses, and pair correlation function calculations revealed that ordered nanostructured arrays with a range of spacings (approximately 7-22 nm) and different geometrical arrangements could be fabricated through the use of the two types of S-layers. These results demonstrate that it is possible to exploit the physicochemical/structural diversity of prokaryotic S-layer scaffolds to vary the morphological patterning of nanoscale metallic and semiconductor NP arrays.

Cadmium Compounds↗

PubMed2006

Real-time analysis of enzymatic surface-initiated polymerization using surface plasmon resonance (SPR).

The kinetics of enzymatic surface-initiated polymerization of PHB on gold surface has been examined by SPR and the resultant polymer layers characterized by AFM and FT-IR spectrometry. The immobilized enzyme catalyzed surface-initiated polymerization of 3HB-CoA, resulting in the formation of a polymer brush on the surface. The rate of polymer growth from the surface was monitored by SPR in real-time. Polymer growth as measured by the increase in the resonance angle showed no apparent lag phase during the polymerization reaction. SPR analysis also revealed that the thickness of the polymer film could be controlled by varying the initial enzyme density on the surface. The average thicknesses of the PHB film after polymerization reaction were 95, 45 and 15 nm for the surfaces that were treated with 0.5, 0.3 and 0.1*10(-6) M of enzyme, respectively. The binding of PHA synthase at different concentration to the mixed SAMs and subsequent polymerization.

Acyltransferases↗

PubMed2006

Self-assembly of dendrimer-encapsulated nanoparticle arrays using 2-D microbial S-layer protein biotemplates.

We investigated the formation of self-assembled two-dimensional (2-D) arrays of dendrimer-encapsulated platinum nanoparticles (Pt-DENs) using prokaryotic surface-layer (S-layer) proteins as biomacromolecular templates. The Pt-DENs (mean core diameter 1.8 +/- 0.5 nm) were synthesized by chemical reduction of metal ion species complexed within the interior of fourth-generation, hydroxyl-terminated, starburst poly(amidoamine) dendrimers (G4 PAMAM-OH). Detailed structural and elemental composition analyses performed using high-resolution transmission electron microscopy, energy-dispersive X-ray spectroscopy, electron energy loss spectroscopy, and X-ray photoelectron spectroscopy indicated that the dendrimer-metal nanocomposite particles were crystalline in nature rather than amorphous and that at least some quantity of the platinum found within the particles is present in the expected zerovalent state. By using the S-layer lattices from the acidothermophilic archaeon Sulfolobus acidocaldarius and the Gram-positive bacterium Deinococcus radiodurans as a biotemplate, hexagonal- and honeycomb-ordered arrays of the Pt-DENs were successfully fabricated under a range of different pH conditions via noncovalent nanoparticle-protein interactions. Fast Fourier transform analyses of transmission electron microscopy images verified that the fabricated Pt-DEN assemblies displayed mean periodicities that corresponded well with the lattice constants of the native protein templates (i.e., 22 and 18 nm for S. acidocaldarius and D. radiodurans S layers, respectively). Our results demonstrate that utilizing pre-synthesized Pt-DENs in conjunction with microbial S-layer proteins displaying highly periodic topochemical properties can be an effective, novel route for creating patterned arrays of Pt nanoparticles with potential technological applications.

Adsorption↗

PubMed2004

Dendrimer-functionalized self-assembled monolayers as a surface plasmon resonance sensor surface.

We report here a multistep route for the immobilization of DNA and proteins on chemically modified gold substrates using fourth-generation NH(2)-terminated poly(amidoamine) dendrimers supported by an underlying amino undecanethiol (AUT) self-assembled monolayer (SAM). Bioactive ultrathin organic films were prepared via layer-by-layer self-assembly methods and characterized by fluorescence microscopy, variable angle spectroscopic ellipsometry, atomic force microscopy (AFM), X-ray photoelectron spectroscopy (XPS), and attenuated total internal reflection Fourier transform infrared spectroscopy (ATR-FTIR). The thickness of the AUT SAM base layer on the gold substrates was determined to be 1.3 nm from ellipsometry. Fluorescence microscopy and AFM measurements, in combination with analyses of the XPS/ATR-FTIR spectra, confirmed the presence of the dendrimer/biopolymer molecules on the multilayer sensor surfaces. Model proteins, including streptavidin and rabbit immunoglobulin proteins, were covalently attached to the dendrimer layer using linear cross-linking reagents. Through surface plasmon resonance measurements, we found that sensor surfaces containing a dendrimer layer displayed an increased protein immobilization capacity, compared to AUT SAM sensor surfaces without dendrimer molecules. Other SPR studies also revealed that the dendrimer-based surfaces are useful for the sensitive and specific detection of DNA-DNA interactions. Significantly, the multicomponent films displayed a high level of stability during repeated regeneration and hybridization cycles, and the kinetics of the DNA-DNA hybridization process did not appear to be influenced by surface mass transport limiting effects.

Biosensing Techniques↗

PubMedDate not supplied

A heavy metal biotrap for wastewater remediation using poly-gamma-glutamic acid.

Poly-gamma-glutamic acid (gamma-PGA) obtained from Bacillus licheniformis ATCC 9945 was evaluated as a potential biosorbent material for use in the removal of heavy metals from aqueous solution. Copper (Cu(2+)) was chosen as the model heavy metal used in these studies since it is extensively used by electroplating and other industries, has been the model for many other similar studies, and can be easily assayed through a number of convenient methods. Cu(2+)-gamma-PGA binding parameters under varying conditions of pH, temperature, ionic strength, and in the presence of other heavy metal ions were determined for the purified biopolymer using a specially designed dialysis apparatus. Applying the Langmuir adsorption isotherm model showed that gamma-PGA had a copper capacity approaching 77.9 mg/g and a binding constant of 32 mg/L (0.5 mM) at pH 4.0 and 25 degrees C. Cu(2+)-gamma-PGA adsorption was relatively temperature independent between 7 and 40 degrees C, while an increase in ionic strength led to a decrease in metal ion binding. Cd(2+) and Zn(2+) ions compete with Cu(2+) for binding sites on the gamma-PGA biopolymer. Metal uptake by gamma-PGA was further tested using a tangential flow filtration apparatus in a diafiltration mode in which metal was continually processed through a dilute solution of gamma-PGA without allowing for equilibrium to be established. The circulating polymer solution was able to complex metal as well as successfully prevent passage of unbound copper ions present in solution through the membrane. Using 500 mL of a 0.2% gamma-PGA solution, up to 97% of a 50 mg/L copper sulfate solution processed at a flow rate of 115 mL/min was retained by the polymer. For a 10 mg/L solution of Cu(2+) as copper sulfate, filtrate concentrations of Cu(2+) never rose above 0.6 mg/L while processing 2.5 L of dilute copper sulfate.

Cations↗