Sigma- and pi-electron delocalization: focus on substituent effects.
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Journal Article↗
Biomedical subjects
Tadeusz Marek Krygowski
Publications and source records attributed to Tadeusz Marek Krygowski.
Interrelation between H-bond and Pi-electron delocalization.
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Journal Article↗
On the aromatic character of the heterocyclic bases of DNA and RNA.
Studies based on ab initio optimized geometries (at B3LYP/6-311+G** and MP2/6-311+G** levels) and on experimental structures retrieved from the Cambridge Structural Database (CSD) reveal that the nucleobases constituting DNA and RNA differ significantly in their aromatic character, as shown by the geometry-based index of aromaticity HOMA that ranges from 0.466 for thymine to 0.917 for adenine, based on B3LYP/6-311+G** calculations, and 0.495-0.926, respectively, if based on the MP2/6-311+G** level. Aromaticity of the bases decreases markedly with an increase of the number of double-bond C=X (X = N, O) substituents at the rings. H-bonds involving C=O groups in Watson-Crick pairs cause an increase of the aromatic character of the rings.
Adenine↗