Biomedical subjects

Tetsuro Toyoda

Publications and source records attributed to Tetsuro Toyoda.

2 recordsLinked to original sources

PubMed2003

KnowledgeEditor: a new tool for interactive modeling and analyzing biological pathways based on microarray data.

UNLABELLED: KnowledgeEditor is a graphical workbench for biological experts to model biomolecular network graphs. The modeled network data are represented by SRML, and can be published via the internet with the help of plug-in module 'GSCope'. KnowledgeEditor helps us to model and analyze biological pathways based on microarray data. It is possible to analyze the drawn networks by simulating up-down regulatory cascade in molecular interactions. AVAILABILITY: KnowledgeEditor is available at http://gscope.gsc.riken.go.jp/.

Cluster Analysis↗

PubMed2003

GSCope: a clipped fisheye viewer effective for highly complicated biomolecular network graphs.

UNLABELLED: A graphical tool to visualize highly complicated biomolecular network graphs is described. It helps us to understand the graphs from macroscopic and microscopic viewpoints by incorporating continuous transition from global to clipped hyperbolic projection. GSCope also helps us to find a molecule in the graphs by offering several searching functions. It is useful to publish biomolecular network graphs on the internet. AVAILABILITY: GSCope is available at http://gscope.gsc.riken.go.jp.

Computer Graphics↗