Biomedical subjects

Thomas J Meyer

Publications and source records attributed to Thomas J Meyer.

At least 19 recordsLinked to original sources

PubMed2006

EGenBio: a data management system for evolutionary genomics and biodiversity.

BACKGROUND: Evolutionary genomics requires management and filtering of large numbers of diverse genomic sequences for accurate analysis and inference on evolutionary processes of genomic and functional change. We developed Evolutionary Genomics and Biodiversity (EGenBio; http://egenbio.lsu.edu) to begin to address this. DESCRIPTION: EGenBio is a system for manipulation and filtering of large numbers of sequences, integrating curated sequence alignments and phylogenetic trees, managing evolutionary analyses, and visualizing their output. EGenBio is organized into three conceptual divisions, Evolution, Genomics, and Biodiversity. The Genomics division includes tools for selecting pre-aligned sequences from different genes and species, and for modifying and filtering these alignments for further analysis. Species searches are handled through queries that can be modified based on a tree-based navigation system and saved. The Biodiversity division contains tools for analyzing individual sequences or sequence alignments, whereas the Evolution division contains tools involving phylogenetic trees. Alignments are annotated with analytical results and modification history using our PRAED format. A miscellaneous Tools section and Help framework are also available. EGenBio was developed around our comparative genomic research and a prototype database of mtDNA genomes. It utilizes MySQL-relational databases and dynamic page generation, and calls numerous custom programs. CONCLUSION: EGenBio was designed to serve as a platform for tools and resources to ease combined analysis in evolution, genomics, and biodiversity.

Animals↗

PubMed2006

Henry Taube: inorganic chemist extraordinaire.

The numerous innovative contributions of Henry Taube to modern inorganic chemistry are briefly reviewed. Highlights include the determination of solvation numbers and lability, elucidation of substitution mechanisms, discovery and documentation of inner-sphere electron transfer, and discovery of the remarkable coordination chemistry of ruthenium and osmium ammine complexes with unsaturated ligands and mixed-valence complexes and their fundamental relationship to intramolecular electron transfer.

Journal Article↗

PubMed2006

Electrocatalytic oxidation of tyrosine by parallel rate-limiting proton transfer and multisite electron-proton transfer.

The oxidation of the amino acids tyrosine and tryptophan by complexes based on M(bpy)33+ (M = Ru, Os) was studied by monitoring the cyclic voltammetry of the metal complex in the presence of the oxidizable amino acids. Addition of both amino acids to aqueous solutions of the metal complexes in phosphate buffer produced electrocatalytic enhancement in the oxidative wave observed at indium tin oxide electrodes. The kinetics for the oxidation by the Ru(III) and Os(III) forms was determined by digital simulation. The oxidation kinetics for tryptophan were consistent with outer-sphere electron transfer, giving an expected dependence of the oxidation rate constant on the reduction potential of the metal complex. In contrast, oxidation of tyrosine at pH 7.5 did not give an appreciable dependence on the metal complex potential. These results were explained by a kinetic model where proton transfer from tyrosine to phosphate can be the rate-limiting step in competition with a concerted, multisite electron-proton-transfer pathway that is observed at lower base concentrations. These results suggest that tyrosine oxidation in enzymes can access both pathways depending on the solvent accessibility of the oxidized residue and the availability of a suitable proton acceptor.

Catalysis↗

PubMed2006

Photoinduced charge transfer between CdSe nanocrystal quantum dots and Ru-polypyridine complexes.

In this communication, we demonstrate a new approach to sensitization of Ru-polypyridine complexes by using semiconductor nanocrystal quantum dots (NQDs). When mixed in solution, the complexes functionalized by carboxylic groups adsorb onto the surface of the NQDs. Excitation of NQDs by 400 nm light leads to fast, 5 ps hole transfer from the photoexcited NQDs to the surface-adsorbed complexes. This result indicates that Ru complexes can be sensitized by CdSe NQDs, which opens interesting opportunities for designing new types of photocatalytic materials for solar energy conversion applications. These materials will take advantage of broad size-controlled absorption spectra and large extinction coefficients of NQDs as well as the unique property of NQDs to respond to absorption of a single photon by producing multiple electron-hole pairs.

Journal Article↗

PubMed2006

Synthesis and characterization of oligoproline-based molecular assemblies for light harvesting.

Helical oligoproline arrays provide a structurally well-defined environment for building photochemical energy conversion assemblies. The use of solid-phase peptide synthesis (SPPS) to prepare four such arrays, consisting of 16, 17, 18, and 19 amino acid residues, is described here. Each array contains the chromophore [Rub'(2)m](PF(6))(2) (b' = 4,4'-diethylamidocarbonyl-2,2'-bipyridine; m = 4-methyl-2,2'-dipyridine-4'-carboxylic acid) and the electron transfer donor PTZ (phenothiazine). The arrays differ systematically in the distance between the redox-active metal complex and PTZ sites. They have been used in photophysical studies to provide insight into the distance dependence of electron transfer. (J. Am. Chem. Soc. 2004, 126, 14506-14514). This work describes the synthesis, purification, and characterization of the oligoproline arrays, including a general procedure for the synthesis of related arrays.

Electrons↗

PubMed2006

Green primary explosives: 5-nitrotetrazolato-N2-ferrate hierarchies.

The sensitive explosives used in initiating devices like primers and detonators are called primary explosives. Successful detonations of secondary explosives are accomplished by suitable sources of initiation energy that is transmitted directly from the primaries or through secondary explosive boosters. Reliable initiating mechanisms are available in numerous forms of primers and detonators depending upon the nature of the secondary explosives. The technology of initiation devices used for military and civilian purposes continues to expand owing to variations in initiating method, chemical composition, quantity, sensitivity, explosive performance, and other necessary built-in mechanisms. Although the most widely used primaries contain toxic lead azide and lead styphnate, mixtures of thermally unstable primaries, like diazodinitrophenol and tetracene, or poisonous agents, like antimony sulfide and barium nitrate, are also used. Novel environmentally friendly primary explosives are expanded here to include cat[Fe(II)(NT)(3)(H(2)O)(3)], cat(2)[Fe(II)(NT)(4)(H(2)O)(2)], cat(3)[Fe(II)(NT)(5)(H(2)O)], and cat(4)[Fe(II)(NT)(6)] with cat = cation and NT(-) = 5-nitrotetrazolato-N(2). With available alkaline, alkaline earth, and organic cations as partners, four series of 5-nitrotetrazolato-N(2)-ferrate hierarchies have been prepared that provide a plethora of green primaries with diverse initiating sensitivity and explosive performance. They hold great promise for replacing not only toxic lead primaries but also thermally unstable primaries and poisonous agents. Strategies are also described for the systematic preparation of coordination complex green primaries based on appropriate selection of ligands, metals, and synthetic procedures. These strategies allow for maximum versatility in initiating sensitivity and explosive performance while retaining properties required for green primaries.

Cations↗

PubMed2006

Green primaries: environmentally friendly energetic complexes.

Primary explosives are used in small quantities to generate a detonation wave when subjected to a flame, heat, impact, electric spark, or friction. Detonation of the primary explosive initiates the secondary booster or main-charge explosive or propellant. Long-term use of lead azide and lead styphnate as primary explosives has resulted in lead contamination at artillery and firing ranges and become a major health hazard and environmental problem for both military and civilian personnel. Devices using lead primary explosives are manufactured by the tens of millions every year in the United States from primers for bullets to detonators for mining. Although substantial synthetic efforts have long been focused on the search for greener primary explosives, this unresolved problem has become a "holy grail" of energetic materials research. Existing candidates suffer from instability or excessive sensitivity, or they possess toxic metals or perchlorate. We report here four previously undescribed green primary explosives based on complex metal dianions and environmentally benign cations, (cat)(2)[M(II)(NT)(4)(H(2)O)(2)] (where cat is NH(4)(+) or Na(+), M is Fe(2+) or Cu(2+), and NT(-) is 5-nitrotetrazolato-N(2)). They are safer to prepare, handle, and transport than lead compounds, have comparable initiation efficiencies to lead azide, and offer rapid reliable detonation comparable with lead styphnate. Remarkably, they possess all current requirements for green primary explosives and are suitable to replace lead primary explosives in detonators. More importantly, they can be synthesized more safely, do not pose health risks to personnel, and cause much less pollution to the environment.

Journal Article↗

PubMed2005

Chemical approaches to artificial photosynthesis. 2.

The goal of artificial photosynthesis is to use the energy of the sun to make high-energy chemicals for energy production. One approach, described here, is to use light absorption and excited-state electron transfer to create oxidative and reductive equivalents for driving relevant fuel-forming half-reactions such as the oxidation of water to O2 and its reduction to H2. In this "integrated modular assembly" approach, separate components for light absorption, energy transfer, and long-range electron transfer by use of free-energy gradients are integrated with oxidative and reductive catalysts into single molecular assemblies or on separate electrodes in photelectrochemical cells. Derivatized porphyrins and metalloporphyrins and metal polypyridyl complexes have been most commonly used in these assemblies, with the latter the focus of the current account. The underlying physical principles--light absorption, energy transfer, radiative and nonradiative excited-state decay, electron transfer, proton-coupled electron transfer, and catalysis--are outlined with an eye toward their roles in molecular assemblies for energy conversion. Synthetic approaches based on sequential covalent bond formation, derivatization of preformed polymers, and stepwise polypeptide synthesis have been used to prepare molecular assemblies. A higher level hierarchial "assembly of assemblies" strategy is required for a working device, and progress has been made for metal polypyridyl complex assemblies based on sol-gels, electropolymerized thin films, and chemical adsorption to thin films of metal oxide nanoparticles.

Journal Article↗

PubMed2005

Mechanism of oxidation of benzaldehyde by polypyridyl oxo complexes of Ru(IV).

The oxidation of benzaldehyde and several of its derivatives to their carboxylic acids by cis-[Ru(IV)(bpy)2(py)(O)]2+ (Ru(IV)=O2+; bpy is 2,2'-bipyridine, py is pyridine), cis-[Ru(III)(bpy)2(py)(OH)]2+ (Ru(III)-OH2+), and [Ru(IV)(tpy)(bpy)(O)]2+ (tpy is 2,2':6',2''-terpyridine) in acetonitrile and water has been investigated using a variety of techniques. Several lines of evidence support a one-electron hydrogen-atom transfer (HAT) mechanism for the redox step in the oxidation of benzaldehyde. They include (i) moderate k(C-H)/k(C-D) kinetic isotope effects of 8.1 +/- 0.3 in CH3CN, 9.4 +/- 0.4 in H2O, and 7.2 +/- 0.8 in D2O; (ii) a low k(H2O/D2O) kinetic isotope effect of 1.2 +/- 0.1; (iii) a decrease in rate constant by a factor of only approximately 5 in CH3CN and approximately 8 in H2O for the oxidation of benzaldehyde by cis-[Ru(III)(bpy)2(py)(OH)]2+ compared to cis-[Ru(IV)(bpy)2(py)(O)]2+; (iv) the appearance of cis-[Ru(III)(bpy)2(py)(OH)]2+ rather than cis-[Ru(II)(bpy)2(py)(OH2)]2+ as the initial product; and (v) the small rho value of -0.65 +/- 0.03 in a Hammett plot of log k vs sigma in the oxidation of a series of aldehydes. A mechanism is proposed for the process occurring in the absence of O2 involving (i) preassociation of the reactants, (ii) H-atom transfer to Ru(IV)=O2+ to give Ru(III)-OH2+ and PhCO, (iii) capture of PhCO by Ru(III)-OH2+ to give Ru(II)-OC(O)Ph+ and H+, and (iv) solvolysis to give cis-[Ru(II)(bpy)2(py)(NCCH3)]2+ or the aqua complex and the carboxylic acid as products.

Journal Article↗

PubMed2005

Electropolymerization of vinylbipyridine complexes of ruthenium(II) and osmium(II) in SiO2 sol-gel films.

PF(6)(-) salts of the complexes [Ru(vbpy)(3)](2+) and [Os(vbpy)(3)](2+) (vbpy = 4-methyl-4'-vinyl-2,2'-bipyridine) have been electropolymerized into the pores of SiO(2) sol-gel films deposited on conductive Tin(IV)-doped indium oxide-coated glass slides (ITO, In(2)O(3):Sn). The resulting transparent composites represent a new class of materials of general formulas ITO/SG-poly-[Ru(vbpy)(3)](PF(6))(2) and ITO/SG-poly-[Os(vbpy)(3)](PF(6))(2). The composites are stable with respect to loss of complexes to the external solution and demonstrate several interesting phenomena: (1) Sol-gel pores, serving as diffusion channels for the vbpy complexes and counterions, play a key role in the formation of the polymer and dictate the electrochemical properties of the resulting composite. (2) Dynamic polymer growth occurs within individual diffusion channels creating parallel structures of filled and unfilled channels. (3) Unidirectional charge transfer and a "bilayer" effect have been shown to operate in ITO/SG-poly-[Ru(vbpy)(3)](PF(6))(2) films exposed to [Os(vbpy)(3)](PF(6))(2) in the external solution. (4) Photophysical properties of the metal-to-ligand charge transfer (MLCT) excited states in ITO/SG-poly-[Ru(vbpy)(3)](PF(6))(2) composites are significantly modified compared to electropolymerized films on ITO or model monomeric complexes in solution.

Journal Article↗

PubMed2005

Iminic N-bound iminophosphorano versus nitrilic n-bound iminophosphorano Os(IV) complexes: a new double derivatization of the nitrido ligand.

The reactions between trans-[Os(IV)(tpy)(Cl)(2)(NCN)] (1) and PPh(3) and between trans-[Os(IV)(tpy)(Cl)(2)(NPPh(3))](+) (2) and CN(-) provide new examples of double derivatization of the nitrido ligand in an Os(VI)-nitrido complex (Os(VI)N). The nitrilic N-bound product from the first reaction, trans-[Os(II)(tpy)(Cl)(2)(NCNPPh(3))] (3), is the coordination isomer of the first iminic N-bound product from the second reaction, trans-[Os(II)(tpy)(Cl)(2)(N(CN)(PPh(3)))] (4). In CH(3)CN at 45 degrees C, 4 undergoes isomerrization to 3 followed by solvolysis and release of (N-cyano)iminophosphorane, NCNPPh(3). These reactions demonstrate new double derivatization reactions of the nitrido ligand in Os(VI)N with its implied synthetic utility.

Journal Article↗

PubMed2005

Ultrafast energy transfer between the 3MLCT state of [Ru(II)(dmb)2(bpy-an)]2+ and the covalently appended anthracene.

The time scale for triplet-triplet energy transfer (EnT) between a Ru(II) chromophore and a ligand bound anthracene acceptor in [Ru(II)(dmb)2(bpy-an)]2+ (dmb = 4,4'-dimethyl-2,2-bipyridine; bpy-an = 4-(9-anthrylethylene), 4-methyl-2,2-bipyridine) has been measured using femtosecond transient absorption spectroscopy. The appearance of the anthracene excited state is monitored following photoexcitation to a metal-to-ligand charge transfer (MLCT) state via the pi pi* absorption of the triplet excited state of anthracene. Our time-resolved experiments show the presence of fast, sub-100 ps energy transfer to the anthracene occurring on two characteristic time scales of 23 and 72 ps.

Journal Article↗

PubMed2005

Photoelectrochemistry on Ru(II)-2,2'-bipyridine-phosphonate-derivatized TiO2 with the I3-/I- and quinone/hydroquinone relays. Design of photoelectrochemical synthesis cells.

Photocurrent measurements have been made on nanocrystalline TiO2 surfaces derivatized by adsorption of a catalyst precursor, [Ru(tpy)(bpy(PO3H2)2)(OH2)]2+, or chromophore, [Ru(bpy)2 (bpy(PO3H2)2)]2+ (tpy is 2,2':6',2' '-terpyridine, bpy is 2,2'-bipyridine, and bpy(PO3H2)2 is 2,2'-bipyridyl-4,4'-diphosphonic acid), and on surfaces containing both complexes. This is an extension of earlier work on an adsorbed assembly containing both catalyst and chromophore. The experiments were carried out with the I3-/I- or quinone/hydroquinone (Q/H2Q) relays in propylene carbonate, propylene carbonate-water mixtures, and acetonitrile-water mixtures. Electrochemical measurements show that oxidation of surface-bound Ru(III)-OH2(3+) to Ru(IV)=O(2+) is catalyzed by the bpy complex. Addition of aqueous 0.1 M HClO4 greatly decreases photocurrent efficiencies for adsorbed [Ru(tpy)(bpy(PO3H2)2)(OH2)]2+ with the I3-/I- relay, but efficiencies are enhanced for the Q/H2Q relay in both propylene carbonate-HClO4 and acetonitrile-HClO4 mixtures. The dependence of the incident photon-to-current efficiency (IPCE) on added H2Q in 95% propylene carbonate and 5% 0.1 M HClO4 is complex and can be interpreted as changing from rate-limiting diffusion to the film at low H2Q to rate-limiting diffusion within the film at high H2Q. There is no evidence for photoelectrochemical cooperativity on mixed surfaces containing both complexes with the IPCE response reflecting the relative surface compositions of the two complexes. These results provide insight into the possible design of photoelectrochemical synthesis cells for the oxidation of organic substrates.

Journal Article↗

PubMed2005

Effect of surface immobilization on intramolecular and intermolecular electron transfer in a chromophore-donor-acceptor assembly.

A chromophore-donor-acceptor assembly [Ru(bpyCOOH)(bpyCH(2)MV(2+)) (bpyCH(2)PTZ)](4+)(1) (where bpyCOOH = 4-carboxylic acid-4'-methyl-2,2'-bipyridine, bpyCH(2)MV(2+) = 1-[(4'-methyl-2,2'-bipyridin-4-yl)methyl]-1'-methyl-4,4'-bipyridinediium, and bpyCH(2)PTZ = 10-[(4'-methyl-2,2'-bipyridin-4-yl)methyl]phenothiazine) has been adsorbed on the surface of nanocrystalline ZrO(2) and its excited state properties studied by emission and transient absorption spectroscopy. In deaerated acetonitrile solution, the complex emits weakly with an emission quantum yield of phi(em) approximately equal to 0.01 with an excited-state lifetime of tau approximately equal to 20 ps. Emission from the surface-adsorbed complex is intense, with phi(em) approximately equal to 0.4 and tau approximately equal to 40 ns. The increase in emission on the surface is likely due to a significant inhibition to the electron-transfer quenching of the metal-to-ligand charge transfer (MLCT) excited state caused by surface adsorption-induced changes in the redox potentials. Transient (nanosecond time scale) absorption monitoring, following laser flash photolysis, reveals the presence of a transient or transients that are formed during the flash. Transient spectral changes that occur during and after the flash are consistent with the formation and decay of the intermediate ZrO(2)-[Ru(bpyCOOH)(bpyCH(2)MV(+*))(bpyCH(2)PTZ(+*))](4+). It returns to the ground state by both intramolecular and intermolecular processes. Intramolecular electron transfer occurs with k(BET) = 6.3 x 10(6) s(-1) (tau = 160 ns), which is comparable to the rate constant for back-electron transfer in solution. The back-electron transfer is a second-order process and is much slower, with k(BET) = 390 M(-1) s(-1) (tau = 2.6 ms).

Journal Article↗

PubMed2004

Evidence for through-space electron transfer in the distance dependence of normal and inverted electron transfer in oligoproline arrays.

Four new helical oligoproline assemblies containing 16, 17, 18, and 19 proline residues and ordered arrays of a Ru(II)-bipyridyl chromophore and a phenothiazine electron-transfer donor have been synthesized in a modular fashion by solid-phase peptide synthesis. These arrays are illustrated and abbreviated as CH(3)CO-Pro(6)-Pra(PTZ)-Pro(n)()-Pra(Ru(II)b(2)m)(2+)-Pro(6)-NH(2), where PTZ is 3-(10H-phenothiazine-10)propanoyl and (Ru(II)b'(2)m)(2+) is bis(4,4'-diethylamide-2,2'-bipyridine)(4-methyl,4'-carboxylate,2,2'-bipyridine)ruthenium(II) dication with n = 2 (2), 3 (3), 4 (4), and 5 (5). They contain PTZ as an electron-transfer donor and (Ru(II)b'(2)m)(2+) as a metal-to-ligand charge transfer (MLCT) light absorber and are separated by proline-to-proline through-space distances ranging from 0 (n = 2) to 12.9 A (n = 5) relative to the n = 2 case. They exist in the proline-II helix form in water, as shown by circular dichroism measurements. Following laser flash Ru(II) --> b'(2)m MLCT excitation at 460 nm in water, excited-state PTZ --> Ru(2+) quenching (k(2)) occurs by reductive electron transfer, followed by Ru(+) --> PTZ(+) back electron transfer (k(3)), as shown by transient absorption and emission measurements in water at 25 degrees C. Quenching with DeltaG degrees = -0.1 eV is an activated process, while back electron transfer occurs in the inverted region, DeltaG degrees = -1.8 eV, and is activationless, as shown by temperature dependence measurements. Coincidentally, both reactions have comparable distance dependences, with k(2)( )()varying from = 1.9 x 10(9) (n = 2) to 2.2 x 10(6) s(-)(1) (n = 4) and k(3) from approximately 2.0 x 10(9) (n = 2) to 2.2 x 10(6) s(-)(1) (n = 4). For both series there is a rate constant enhancement of approximately 10 for n = 5 compared to n = 4 and a linear decrease in ln k with the through-space separation distance, pointing to a significant and probably dominant through-space component to intrahelical electron transfer.

Electrons↗

PubMed2004

Colossal kinetic isotope effects in proton-coupled electron transfer.

The kinetics of reduction of benzoquinone (Q) to hydroquinone (H(2)Q) by the Os(IV) hydrazido (trans-[Os(IV)(tpy)(Cl)(2)(N(H)N(CH(2))(4)O)]-PF(6) = [1]PF(6), tpy = 2,2':6',2"-terpyridine), sulfilimido (trans-[Os(IV)-(tpy)(Cl)(2)(NS(H)-4-C(6)H(4)Me)]PF(6) = [2]PF(6)), and phosphoraniminato (trans-[Os(IV)(Tp)(Cl)(2)(NP(H)(Et)(2))] = [3], Tp(-) = tris(pyrazolyl)-borate) complexes have been studied in 1:1 (vol/vol) CH(3)CN/H(2)O and CH(3)CN/D(2)O (1.0 M in NH(4)PF(6)/KNO(3) at 25.0 +/- 0.1 degrees C). The reactions are first order in both [Q] and Os(IV) complex and occur by parallel pH-independent (k(1)) and pH-dependent (k(2)) pathways that can be separated by pH-dependent measurements. Saturation kinetics are observed for the acid-independent pathway, consistent with formation of a H-bonded intermediate (K(A)) followed by a redox step (k(red)). For the pH-independent pathway, k(1)(H(2)O)/k(1)(D(2)O) kinetic isotope effects are 455 +/- 8 for [1(+)], 198 +/- 6 for [2(+)], and 178 +/- 5 for [3]. These results provide an example of colossal kinetic isotope effects for proton-coupled electron transfer reactions involving nitrogen, sulfur, and phosphorus as proton-donor atoms.

Electron Transport↗

PubMed2004

Stepwise oxidation of anilines by cis-[RuIV(bpy)2(py)(O)]2+.

The net six-electron oxidation of aniline to nitrobenzene or azoxybenzene by cis-[Ru(IV)(bpy)(2)(py)(O)](2+) (bpy is 2,2'-bipyridine; py is pyridine) occurs in a series of discrete stages. In the first, initial two-electron oxidation is followed by competition between oxidative coupling with aniline to give 1,2-diphenylhydrazine and capture by H(2)O to give N-phenylhydroxylamine. The kinetics are first order in aniline and first order in Ru(IV) with k(25.1 degrees C, CH(3)CN) = (2.05 +/- 0.18) x 10(2) M(-1) s(-1) (DeltaH(++) = 5.0 +/- 0.7 kcal/mol; DeltaS(++) = -31 +/- 2 eu). On the basis of competition experiments, k(H)2(O)/k(D)2(O) kinetic isotope effects, and the results of an (18)O labeling study, it is concluded that the initial redox step probably involves proton-coupled two-electron transfer from aniline to cis-[Ru(IV)(bpy)(2)(py)(O)](2+) (Ru(IV)=O(2+)). The product is an intermediate nitrene (PhN) or a protonated nitrene (PhNH(+)) which is captured by water to give PhNHOH or aniline to give PhNHNHPh. In the following stages, PhNHOH, once formed, is rapidly oxidized by Ru(IV)=O(2+) to PhNO and PhNHNHPh to PhN=NPh. The rate laws for these reactions are first order in Ru(IV)=O(2+) and first order in reductant with k(14.4 degrees C, H(2)O/(CH(3))(2)CO) = (4.35 +/- 0.24) x 10(6) M(-1) s(-1) for PhNHOH and k(25.1 degrees C, CH(3)CN) = (1.79 +/- 0.14) x 10(4) M(-1) s(-1) for PhNHNHPh. In the final stages of the six-electron reactions, PhNO is oxidized to PhNO(2) and PhN=NPh to PhN(O)=NPh. The oxidation of PhNO is first order in PhNO and in Ru(IV)=O(2+) with k(25.1 degrees C, CH(3)CN) = 6.32 +/- 0.33 M(-1) s(-1) (DeltaH(++) = 4.6 +/- 0.8 kcal/mol; DeltaS(++) = -39 +/- 3 eu). The reaction occurs by O-atom transfer, as shown by an (18)O labeling study and by the appearance of a nitrobenzene-bound intermediate at low temperature.

Journal Article↗

PubMed2004

Solvent dependence of intramolecular electron transfer in a helical oligoproline assembly.

The helical oligoproline assembly CH3-CO-Pro-Pro-Pro-Pra(Ptzpn)-Pro-Pro-Pra(RuIIb2m2+ -Pro-Pro-Pra(Anq)-Pro-Pro-Pro-NH2, having a spatially ordered array of functional sites protruding from the proline backbone, has been prepared. The 13-residue assembly formed a linear array containing a phenothiazine electron donor, a tris(bipyridine)ruthenium(II) chromophore, and an anthraquinone electron acceptor with the proline II secondary structure as shown by circular dichroism measurements. Following RuII --> b2m metal-to-ligand charge-transfer (MLCT) excitation at 457 nm, electron-transfer quenching occurs, ultimately to give a redox-separated (RS) state containing a phenothiazine (PTZ) radical cation at the Pra(Ptzpn) site and an anthraquinone (ANQ) radical anion at the Pra(Anq) site. The redox-separated state was formed with 33-96% efficiency depending on the solvent, and the transient stored energy varied from -1.46 to -1.71 eV at 22 +/- 2 degrees C. The dominant quenching mechanism is PTZ reductive quenching of the initial RuIII(b2m*-) MLCT excited state which is followed by m*- --> ANQ electron transfer to give the RS state. Back electron transfer is highly exergonic and occurs in the inverted region. The rate constant for back electron transfer is solvent dependent and varies from 5.2 x 10(6) to 7.7 x 10(6) s-1 at 22 +/- 2 degrees C. It is concluded that back electron transfer occurs by direct ANQ*- --> PTZ*+ electron transfer. Based on independently evaluated kinetic parameters, the electron-transfer matrix element is HDA approximately 0.13 cm-1.

2,2'-Dipyridyl↗