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Thomas Krüger

Publications and source records attributed to Thomas Krüger.

8 recordsLinked to original sources
PubMed2005

Theoretical study of the interaction between selected adhesives and oxide surfaces.

We investigate the competition of the various organic components of two representative adhesive systems for reactive defect sites at model surfaces of both SiO2 and Al2O3. The reaction energies of resin monomers, curing agents, and in some cases also of additional adhesion promoters with the defects are calculated. We applied a density-functional based tight-binding method including a self-consistent correction of the Mulliken charges, which has already proven to be a useful tool for computational materials science, delivering reliable structural and energetic information.

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PubMed2005

Validation of the density-functional based tight-binding approximation method for the calculation of reaction energies and other data.

We investigated the performance of the approximative density functional method DFTB versus BLYP and G2 with respect to zero-point corrected reaction energies, vibrational frequencies, and geometry parameters for a set of 28 reactions and 22 representative molecules containing C, H, N, and O (DFTB--density-functional based tight-binding approximation). The DFTB reaction energies show a mean absolute deviation versus the G2 reference of 4.3 kcalmol only. The corresponding value for the vibrational frequencies amounts to 75 cm(-1) versus BLYP/cc-pVTZ. With very few exceptions bond lengths and angles are in excellent agreement with the results of higher-level methods.

Journal Article↗
PubMed2004

Synthesis of [(MeCyt)2H]I-structure and stability of a dimeric threefold hydrogen-bonded 1-methylcytosinium 1-methylcytosine cation.

Reaction of trimethylsilyl-protected cytosine with methyl iodide afforded N1-methylated product. Subsequent treatment with ethanol resulted in cleavage of the protection group forming [(MeCyt)2H]I (4). Identity of was confirmed by microanalysis, mass spectrometry, 1H and 13C NMR spectroscopy and by single-crystal X-ray diffraction analysis. Crystals of consist of dimeric [(MeCyt)2H]+ cations and I- anions. These ions are arranged in the crystal such that there is a strong base stacking (mean stacking distance 3,467 angstroms) and, furthermore, pi interactions between I- and cytosine rings (mean distance 3,737 angstroms). The dimeric [(MeCyt)2H]+ cations are centrosymmetric having three strong hydrogen bonds, namely two terminal N4-H...O' ones (N4...O' 2.815(4) angstroms) and a central N3-H...N3' (N3...N3' 2.813(4) angstroms) one. Quantum chemical calculations on the DFT level of theory show that the gas phase structure of the dimeric cation exhibits two different terminal N-HO hydrogen bonds, a stronger (N4...O' 2.722 angstroms) and a weaker one (N4'...O 2.960 angstroms). The central N3-HN3[prime or minute] hydrogen bond (N3...N3' 2.852 angstroms) was characterized to have an unsymmetrically located proton and a typical double minimum potential with a very low activation barrier. The interaction energy between [(MeCyt)H]+ and MeCyt yielding [(MeCyt)2H]+ was calculated to be -42.4 kcal mol(-1)(ZPE and BSSE corrected). Comparison with the interaction energy (calculated on the same level of the theory) between cytosine and guanine yielding the triply hydrogen-bonded Watson-Crick dimer (-24.2 kcal mol(-1)) revealed a much higher stability of the hydrogen bonds in [(MeCyt)2H]+.

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PubMed2003

Unusual coupling reactions of aldehydes and alkynes: a novel preparation of substituted phthalic acid derivatives by automated synthesis.

Based upon a highly versatile multicomponent methodology, a new one-pot synthesis of substituted phthalic acid derivatives from alpha,beta-unsaturated aldehydes was developed. The reaction involves the intermediacy of an acetamidodiene species which undergoes Diels-Alder addition to diethyl acetylenedicarboxylate. The resultant acetamidocyclohexadiene is subject to elimination of acetamide under the reaction conditions to give rise to substituted diethyl phthalates in good yields. This domino condensation-cycloaddition-elimination sequence has been applied to a variety of alpha,beta-unsaturated aldehydes. Furthermore, we demonstrated the exploitation of parallelized and automated synthesis technology for the rapid screening of reaction conditions and compositions. Detailed studies revealed the catalytic role of the employed acetamide and the occurrence of a stereoselective 1,4-syn elimination pathway under standard conditions.

Journal Article↗
PubMed2002

Oligovalent link atoms in embedding calculations.

Making reasonable statements about large systems is a notoriously difficult task of quantum chemistry. If such a system consists of a small but electronically important region, the core, which requires a treatment on a high level of theory, and a larger remainder, the bulk, which only acts in a perturbative fashion and thus admits a description on a lower level of theory, then it is appropriate to partition it accordingly and use an embedding scheme to provide for the coupling of the two regions. In many cases of said partitioning it will be necessary to cut covalent bonds so that the emerging free valences have to be saturated by link atoms. Mostly hydrogen atoms are used. However, it may be necessary to separate the entire system so that bulk atoms are generated that are bound to two or three core atoms at once, that is, such bulk atoms are divalent or even trivalent with respect to the core. In the present article we demonstrate by means of several silane molecules, ranging from Si3H8 to Si104H92, that the use of oligovalent link atoms is quite promising.

Journal Article↗
PubMed2002

Process-dissociation procedure: a testable model for considering assumptions about the stochastic relation between consciously controlled and automatic processes.

This paper presents an extension of the process-dissociation procedure with wordstem completion, which makes possible the measurement of the stochastic relationship between consciously controlled and automatic processes. By means of an indirect wordstem completion test, the conditional probabilities of conscious remembering with and without automatic processes can be successfully determined. A multinomial model for the evaluation of this extended process-dissociation procedure is presented. This model makes the distinction between voluntary and involuntary conscious memory processes possible and has been applied to two experiments discussed in this paper. The results show that the assumption of stochastic independence is often violated, albeit not as strongly as predicted by the redundancy or exclusivity model variants. Two conscious processes were found, voluntary and involuntary conscious memory processes, each with a different probability of occurrence.

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PubMed2002

Influence of ion channels on the proliferation of human chondrocytes.

The goal of the study was to examine connections between ion channel activity and the proliferation of human chondrocytes. Chondrocytes were isolated form human osteoarthritic knee joint cartilage. In this study the concentration-dependent influence of the ion channel modulators tetraethylammonium (TEA), 4-aminopyridine (4-AP), 4',4' diisothiocyanato-stilbene-2,2'-disulfonic acid (DIDS), 4-acetamido-4'-isothiocyano-2,2'-disulfonic acid stilbene (SITS), verapamil (vp) and lidocaine (lido) on the membrane potential and the proliferation of human chondrocytes was investigated using flow cytometry and the measurement of (3)H-thymidine incorporation as measure for the cell proliferation. The results show an effect of the used ion channel modulators causing a change of the membrane potential of human chondrocytes. The maximal measurable effects of the membrane potential were listed with 0.25 mmol/l verapamil (-18%) and 0.1 mmol/l lidocaine (+20%). When measuring DNA distribution, it became apparent that the human chondrocytes are diploid cells with a very low proliferation tendency. After 12 days culture duration, lidocaine and 4-AP cause an increase of the DNA synthesis rate being a limited effect. These results allow the conclusion of an influence of ion channel modulators on chondrocyte proliferation. To gain knowledge of the regulation of chondrocyte proliferation via ion channel modulators could serve the research of new osteoarthritis treatment concepts.

4,4'-Diisothiocyanostilbene-2,2'-Disulfonic Acid↗