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Timothy J Blanche

Publications and source records attributed to Timothy J Blanche.

2 recordsLinked to original sources

Nyquist interpolation improves neuron yield in multiunit recordings.

Multiunit electrodes, in particular tetrodes and polytrodes, are able to isolate action potentials from many neurons simultaneously. However, inaccuracies in the post-acquisition reconstruction of recorded spike waveforms can affect the reliability of spike detection and sorting. Here we show that bandlimited interpolation with sample-and-hold delay correction reduces waveform variability, leading to improved reliability of threshold-based event detection and improved spike sorting accuracy. Interpolation of continuously acquired data is, however, computationally expensive. A cost-benefit analysis was made of varying sampling rates from 12.5 kHz (no interpolation) to 100 kHz (eight times oversampling, with respect to the Nyquist frequency), taking into consideration the final application of the data. For most purposes, including spike sorting, sample rates below 25 kHz with bandlimited interpolation to 50 kHz were ideal, with negligible gains above this rate. A practical benefit, especially for large electrode arrays, is that the bandwidth and storage requirements can be greatly reduced by using data acquisition rates at or slightly above the Nyquist frequency.

Action Potentials↗

Polytrodes: high-density silicon electrode arrays for large-scale multiunit recording.

We developed a variety of 54-channel high-density silicon electrode arrays (polytrodes) designed to record from large numbers of neurons spanning millimeters of brain. In cat visual cortex, it was possible to make simultaneous recordings from >100 well-isolated neurons. Using standard clustering methods, polytrodes provide a quality of single-unit isolation that surpasses that attainable with tetrodes. Guidelines for successful in vivo recording and precise electrode positioning are described. We also describe a high-bandwidth continuous data-acquisition system designed specifically for polytrodes and an automated impedance meter for testing polytrode site integrity. Despite having smaller interconnect pitches than earlier silicon-based electrodes of this type, these polytrodes have negligible channel crosstalk, comparable reliability, and low site impedances and are capable of making high-fidelity multiunit recordings with minimal tissue damage. The relatively benign nature of planar electrode arrays is evident both histologically and in experiments where the polytrode was repeatedly advanced and retracted hundreds of microns over periods of many hours. It was possible to maintain stable recordings from active neurons adjacent to the polytrode without change in their absolute positions, neurophysiological or receptive field properties.

Action Potentials↗