Biomedical subjects

Xia Jing

Publications and source records attributed to Xia Jing.

3 recordsLinked to original sources

PubMed2005

Bio-Health Information: a Preliminary Review of On-line Cystic Fibrosis Resources.

The aims of this study are to determine, and to better understand, elements that are common across a range of bio-health information resources; and to characterize those resources in terms of search and display functionality. Our ultimate goal is to better define the role of bio-health information in clinical practice and in biological research. This paper reports our first step, which is to compare different web-based resources that describe cystic fibrosis. The resources came from PubMed, Nucleotide, EMBL-EBI, DDBJ, OMIM, MeSH, ICD-10, and the Cystic Fibrosis Mutation Database. We found obvious differences in terms of scope and purpose. However, while there were obvious similarities between related resources in terms of content, we also found differences among these resources in terms of display form, specificity of qualifiers, file format and the potential for computer processing. While our work is in its early stages, this study has clarified the nature of bio-health information resources and has allowed us to begin to characterize these resources in terms of their suitability in clinical practice and in biological research.

Cystic Fibrosis↗

PubMed2004

BioPD: a web-based information center for bioactive peptides.

Bioactive peptide database (BioPD) is a web-based knowledge base that contains more than 1100 protein sequences from human, mouse and rat, which are putative or are known to be bioactive peptides. In addition to peptide sequences and the annotation, the database also contains gene sequences with annotation, protein interaction and disease data related to the peptides. Each entry has as many references as possible to support the information represented. BioPD consists of six parts: PROTEIN, GENE, DISEASE, LINKS, INTERACTION, and REFERENCE. The database is searchable through keyword, gene and protein name, receptor name, etc. The links to PDB, InterPro, Pfam, OMIM, etc. are provided in each entry. Thus BioPD is formed as an information center for the bioactive peptide and serves as a gateway for exploration of bioactive peptides. The database can be accessed at http://biopd.bjmu.edu.cn.

Animals↗

PubMed2004

[Construction of directory for biomedical databases on INTERNET].

OBJECTIVE: To construct a global directory of biomedical databases(DBD), which can be used free of charge on INTERNET. It will be convenient for researchers to find out related databases quickly, easily and accurately by using DBD since there are not enough useful tools for database retrieval. Biomedical databases will be an accelerator in development of biomedicine with the help of DBD. METHODS: PubMed and Google were main tools for searching related databases. Proper search strategy with rigorous indexing rules helped us to filter databases. The database management system was Microsoft SQL-Server 2000. The web pages of DBD were designed with Macromedia Dreamwaver MX. ASP (active server pages) technology was used to deal with the key words and scores sent by users. RESULTS: There were 66 subjects and 1 258 databases in DBD at this time. We released the Chinese and English versions of DBD on the INTERNET at the same time http://cmbi.bjmu.edu.cn/DBList/index.htm http://cmbi.bjmu.edu.cn/DBList/index_en.htm . Score system was also established to evaluate the content of the indexed databases. Users can search DBD by subjects key words and alphabetic databases' names easily. CONCLUSION: DBD has laid the primary foundation for further core biomedical database evaluation system. DBD, as a useful tool for biomedical database retrieval, will be of great aid to users since databases have played a more and more important role in the biomedical research.

Databases as Topic↗