Biomedical subjects

Xiao-Hui Duan

Publications and source records attributed to Xiao-Hui Duan.

4 recordsLinked to original sources

PubMed2005

Theoretical investigation of spectral properties and tautomerization mechanism of 2-aminopurine.

In this work the spectral properties and tautomerization mechanism of 2-aminopurine are investigated using quantum chemical calculations. TD-DFT results lead to a conclusion that two tautomers of 2-aminopurine discussed in this work are fluorescent and present the pi-->pi* transition feature of vertical excitation and emission. It is predicted that the tautomerization of 2-aminopurine hardly occurs in a direct isomerization mechanism because of the high barrier. However, the explicit involvement of water molecules into the system reduces the barrier height considerably and hence makes the ground state reaction feasible. An explanation for the almost equal populations of the two tautomers in polar solvent is given through reaction mechanism analysis.

2-Aminopurine↗

PubMed2005

Quantum chemical study on excited states and electronic coupling matrix element in a catechol-bridge-dicyanoethylene system.

The excited states of a donor-bridge-acceptor (DBA) model system have been investigated using time-dependent density-functional theory (TD-DFT) in vacuo and in solution. It is found that the MPW1PW91 functional always gives higher excitation energies than those with a B3LYP functional. Results from both TD-B3LYP and TD-MPW1PW91 are found consistent with the experimental observations. The two most intense absorptions of the DBA system, one resulting from the local excitation of catechol moiety and the other from that of dicyanoethylene, possess the pipi* transition feature. It seems that the solvent polarity does not remarkably influence the positions of absorption peaks. The spectroscopic properties of isolated donor, acceptor, and bridge and the donor-bridge compound have been investigated at the TD-B3LYP/6-31+G* and TD-MPW1PW91/6-31+G* levels. Results indicate that the donor and the acceptor are weakly coupled with the bridge. Therefore, it is more likely that the electron transfer takes place through a superexchange mechanism. In addition, we calculate the electronic coupling matrix elements according to the generalized Mulliken-Hush theory, and the detailed analyses also predict that the strong absorptions are due to the local excitation of the DBA system.

Acetonitriles↗

PubMed2005

Time-dependent density functional theory study on intramolecular charge transfer and solvent effect of dimethylaminobenzophenone.

The lower singlet excited states for dimethylaminobenzophenone have been investigated as a function of the twisting motion with inclusion of solvent effects. Theoretical calculations have been performed using time-dependent density functional theory. The B3LYP and MPW1PW91 functionals with a 6-311+G(2d,p) basis set have been used to compute transition energies. The solvent effects have been described within the polarizable continuum model. Ground-state geometries are optimized using density functional theory with both B3LYP and MPW1PW91 functionals combined with 6-31G(d) basis sets. Vertical absorption energy calculations characterize the lower singlet excited states both in vacuum and in different kinds of solvents. A large redshift of the absorption maximum in the polar solvent suggests an intramolecular charge transfer character of the excited state. We have constructed the potential energy curves of two possible twisting motions of the excited states both in vacuum and in the polar solvent of acetonitrile: the twisting of only the dimethylamino group and the twisting of the dimethylaminophenyl group with respect to the benzoyl group. Both twisting processes predict the formation of the twisted intramolecular charge transfer state associated with the crossing of a low barrier. The presence of the polar solvent significantly changes the shape of the energy curves. Calculated emission energies for both the isolated and the solvated systems show a large Stokes shift between the absorption and fluorescence maxima. Two possible twisting motions produce similar fluorescence spectroscopic consequences. Our results including solvent effects explain the weak "dual-fluorescence" feature of dimethylaminobenzophenone, and imply that the two possible twisting motions may occur in the excited-state relaxation dynamics, but the twisting of the dimethylamino group seems to take place easier.

Journal Article↗

PubMed2004

Investigation of photoinduced electron transfer in model system of vitamin E-duroquinone by time-dependent density functional theory.

Photoinduced electron transfer of the model system composed of vitamin E and duroquinone has been investigated using time-dependent density functional theory. Calculations for the excited states tell that the photoexcitation of the model system can directly yield the charge transfer states in which the vitamin E moiety is positively charged but the duroquinone moiety is negatively charged. Our theoretical investigations indicate that the second charge transfer state of the model system can also be produced through the decay of higher locally excited state S(4). Since S(4) state in the model system corresponds to S(1) state of the isolated duroquinone used as a model for peroxyl radical, and S(2) state has the character of electron transfer from the tertiary amine group of the vitamin E moiety to the duroquinone moiety, the decay from S(4) to S(2) corresponds to the dynamic process following the photoexcitation of the duroquinone moiety of the model system, i.e., the initial stage of antioxidant reaction of vitamin E. Calculations of the kinetic parameters for the electron transfer have been carried out in the framework of the Marcus-Jortner-Levich formalism. Our calculations confirm that the electron transfer from S(4) to S(2) possesses the character of the inverted regime and the barrier is negligibly small.

Benzoquinones↗