Biomedical subjects

Xiaowen Xue

Publications and source records attributed to Xiaowen Xue.

4 recordsLinked to original sources

PubMed2005

A threshold for charge transfer in aromatic interactions? A quantitative study of pi-stacking interactions.

[structure: see text] Attractive interactions between substituted arenes in the parallel displaced configuration have been quantitatively studied using triptycene-derived molecular conformational reporters. Charge-transfer bands are observed for models where the interactions are between strong donor and acceptors. Substituent effects on the strength of the aromatic interaction follow opposite trends for strongly electron-deficient arenes and mildly perturbed arenes. The free energy of interactions for models with strong electron donors and acceptors does not follow a linear correlation in the Hammett plot. Electrostatic models alone do not account for the nonlinearity of the free energy-substituents plot.

Electrons↗

PubMed2005

Off-center oxygen-arene interactions in solution: a quantitative study.

[reaction: see text] Triptycenes with C1-MeO/RCOO (R = H, Me, Et, i-Pr, CF3) and C9-XC6H4CH2 (X = Me, H, F, CN, CF3) have been prepared to determine lone pair-arene interactions in the off-center configuration. The ratios of the syn and anti conformers were determined by low-temperature NMR spectroscopy. The syn conformer allows the attached arene and the MeO/ester to interact with each other while the anti conformer does not. The free energies of interaction have been derived from the syn/anti ratios. Compound 7 in the ester series with X = H and R = CF3 is the only compound that shows a slightly repulsive interaction (0.08 kcal/mol). Compound 2e in the MeO series with X = CF3 exhibits an attractive interaction (-0.47 +/- 0.05 kcal mol). All other compounds show smaller attractive interactions.

Journal Article↗

PubMed2005

The strength of parallel-displaced arene-arene interactions in chloroform.

[reaction: see text] Triptycene-derived compounds have been prepared to serve as conformational equilibrium reporters for direct measurements of arene-arene interactions in the parallel-displaced orientation. A series of such compounds bearing arenes with different substituents were synthesized, and the ratios of the syn and anti conformers were determined by variable-temperature NMR spectroscopy. The syn conformer allows attached arenes to interact with each other while the anti conformer does not. The free energies derived from the syn/anti ratios in chloroform range from slightly positive (0.2 kcal/mol) to considerably negative (-0.98 kcal mol) values. The interactions between the arenes bearing electron-donating groups (EDG) are either negligible or slightly repulsive, while the interactions between arenes bearing electron-withdrawing groups (EWG) are attractive. Intermediate free energy values are obtained for those compounds bearing arenes with one EDG and one EWG.

Journal Article↗

PubMed2002

The origin of diastereofacial control in allylboration reactions using tartrate ester derived allylboronates: attractive interactions between the Lewis acid coordinated aldehyde carbonyl group and an ester carbonyl oxygen.

Transition-state structures for the allylboration reaction between the tartrate ester and tartramide modified allylboronates and acetaldehyde are located at the B3LYP/6-31G* level of theory. An attractive interaction between the boron-activated aldehyde and the ester or amide carbonyl oxygen lone pair is found to play a major role in the favored transition states 11a and 13. This attractive interaction appears to be electrostatic in origin. However, an n --> pi* charge-transfer type of interaction has not been ruled out. The distance (2.77 A) between the aldehydic hydrogen and the carbonyl oxygen in transition state 13 is beyond the sum of van der Waals radii. The formyl C-H...O bond angle (109 degrees) in this transition structure deviates far from linearity. Therefore, hydrogen-bonding interactions between the formyl C-H and the amide carbonyl oxygen are considered negligible. The distance (3.81 A) between the aldehydic oxygen and the amide carbonyl oxygen in the diastereomeric, disfavored transition state 14 is also beyond the van der Waals radii, which suggests that n/n electronic repulsion plays a lesser role in stereodifferentiation in the allylboration reaction than originally proposed.

Acetaldehyde↗