PubMed Health⌕ Search

Biomedical subjects

Z Gan

Publications and source records attributed to Z Gan.

At least 19 recordsLinked to original sources

Increasing the sensitivity of 2D high-resolution NMR methods applied to quadrupolar nuclei.

Gan and Kwak recently proposed a soft-pulse added mixing (SPAM) idea in the classical two-pulse multiple-quantum magic-angle spinning scheme. In the SPAM method, a soft pi/2 pulse is added after the second hard-pulse (conversion pulse) and all coherence orders in between them are constructively used to obtain the signal. We, here, further extend this idea to distributed samples where the signal mainly results from echo pathways and that from anti-echo pathways dies out after a few t1 increments. We show that, with a combination of SPAM and collection of fewer anti-echoes, an enhancement of the signal to noise ratio by a factor of ca. 3 may be obtained over the z-filtered version. This may prove to be useful even for samples with long T2' relaxation times.

Journal Article↗

Ultra-wide bore 900 MHz high-resolution NMR at the National High Magnetic Field Laboratory.

Access to an ultra-wide bore (105 mm) 21.1 T magnet makes possible numerous advances in NMR spectroscopy and MR imaging, as well as novel applications. This magnet was developed, designed, manufactured and tested at the National High Magnetic Field Laboratory and on July 21, 2004 it was energized to 21.1 T. Commercial and unique homebuilt probes, along with a standard commercial NMR console have been installed and tested with many science applications to develop this spectrometer as a user facility. Solution NMR of membrane proteins with enhanced resolution, new pulse sequences for solid state NMR taking advantage of narrowed proton linewidths, and enhanced spatial resolution and contrast leading to improved animal imaging have been documented. In addition, it is demonstrated that spectroscopy of single site (17)O labeled macromolecules in a hydrated lipid bilayer environment can be recorded in a remarkably short period of time. (17)O spectra of aligned samples show the potential for using this data for orientational restraints and for characterizing unique details of cation binding properties to ion channels. The success of this NHMFL magnet illustrates the potential for using a similar magnet design as an outsert for high temperature superconducting insert coils to achieve an NMR magnet with a field >25 T.

Image Enhancement↗

New pillared layered gallium phosphonates in the gallium/1,2-ethylenediphosphonic acid system.

1,2-Ethylenediphosphonic acid reacts with gallium nitrate in water to give new pillared layered gallium phosphonates, the structure of which depends on the experimental conditions used for their preparation. Thus, Ga(4)(O(3)PC(2)H(4)PO(3))(3) (1) and Ga(2)(OH)(2)(O(3)PC(2)H(4)PO(3)) (2) were isolated and the structure of 1 was solved by single-crystal X-ray diffraction, while 2 was shown to have the same metal/PO(3) arrangement as the previously described Ga(OH)(O(3)PCH(3)). Ga(4)(O(3)PC(2)H(4)PO(3))(3) (1) is triclinic, with space group P1 with Z = 2, a = 5.1480(4), b = 8.0354(7), and c = 12.383(1) A; alpha = 91.34(1), beta = 101.40(1), and gamma = 90.86(1) degrees; V = 501.9(1) A(3). The structure of 1 is unusual with (i) mixed GaO(4) and GaO(5) sites while a 6-fold coordination is observed for gallium in (2) and (ii) the presence of the organic moiety within both the layers and the interlayer space. The two compounds were fully characterized using (31)P and (71)Ga solid-state NMR.

Journal Article↗

Structural characterization of MAO and related aluminum complexes. 1. Solid-state (27)Al NMR with comparison to EFG tensors from ab initio molecular orbital calculations.

Experimental and ab initio molecular orbital techniques are developed for study of aluminum species with large quadrupole coupling constants to test structural models for methylaluminoxanes (MAO). The techniques are applied to nitrogen- and oxygen-containing complexes of aluminum and to solid MAO isolated from active commercial MAO preparations. (Aminato)- and (propanolato)aluminum clusters with 3-, 4-, and 6-coordinate aluminum sites are studied with three (27)Al NMR techniques optimized for large (27)Al quadrupole coupling constants: field-swept, frequency-stepped, and high-field MAS NMR. Four-membered (aminato)aluminum complexes with AlN(4) coordination yield slightly smaller C(q) values than similar AlN(2)C(2) sites: 12.2 vs 15.8 MHz. Planar 3-coordinate AlN(2)C sites have the largest C(q) values, 37 MHz. In all cases, molecular orbital calculations of the electric field gradient tensors yields C(q) and eta values that match with experiment, even for a large hexameric (aminato)aluminum cage. A D(3d) symmetry hexaaluminum oxane cluster, postulated as a model for MAO, yields a calculated C(q) of -23.7 MHz, eta = 0.7474, and predicts a spectrum that is too broad to match the field-swept NMR of methylaluminoxane, which shows at least three sites, all with C(q) values greater than 15 MHz but less than 21 MHz. Thus, the proposed hexaaluminum cluster, with its strained four-membered rings, is not a major component of MAO. However, calculations for dimers of the cage complex, either edge-bridged or face-bridged, show a much closer match to experiment. Also, MAO preparations differ, with a gel form of MAO having significantly larger (27)Al C(q) values than a nongel form, a conclusion reached on the basis of (27)Al NMR line widths in field-swept NMR spectra acquired from 13 to 24 T.

Journal Article↗

Crystallization, melting, and enzymatic degradation of biodegradable poly(butylene succinate-co-14 mol % ethylene succinate) copolyester.

The crystal structure and growth kinetics of melt-crystallized poly(butylene succinate-co-14 mol % ethylene succinate) [P(BS-co-14 mol % ES)] copolyester have been investigated at a wide crystallization temperature range of 30 to 90 degrees C. By means of wide-angle X-ray diffraction (WAXD), the copolyester composed of BS and ES units has been identified to have the same crystal structure with that of poly(butylene succinate) (PBS) homopolymer, suggesting that only PBS sequences crystallize while that the ES units are in an amorphous form. On the basis of secondary nucleation theory, two regimes of II and III have been observed and their transition temperature is around 80 degrees C. The spherulitic morphologies of P(BS-co-14 mol % ES) copolyester developed from banded spherulites to the normal ones without banding extinction patterns as the crystallization temperature increased. The melting behavior of P(BS-co-14 mol % ES) copolyester under different conditions has been studied by differential scanning calorimetry (DSC). Four melting peaks and one exothermal peak on the melting curves were observed during heating process, and their origination is discussed. The enzymatic degradation was carried out on the melt-crystallized P(BS-co-14 mol % ES) thin film by an extracellar PHB depolymerase from Pseudomonas stutzeri and the morphologies of lamellar crystals before and after degradation have been examined by atomic force microscopy (AFM). The results have indicated that enzymatically degradable ES units exist on the surface of lamellar crystals and are hydrolyzed by the enzyme, while that the crystalline cores composed of PBS chains are not degraded.

Absorbable Implants↗

Solid-state microstructures, thermal properties, and crystallization of biodegradable poly(butylene succinate) (PBS) and its copolyesters.

Studies of solid-state structures under different crystallization conditions, melting behavior, and crystal growth kinetics are reported for biodegradable aliphatic poly(butylene succinate) (PBS) and its random copolyesters of poly(butylene succinate-co-14 mol %ethylene succinate) [P(BS-co-14 mol %ES)] and poly(butylene succinate-co-15 mol %hexamethylene succinate) [P(BS-co-15 mol %HS)]. The crystal structures of two copolyesters determined by wide-angle X-ray diffraction (WAXD) are the same as that of the PBS homopolymer, suggesting that the second comonomers ES or HS units are excluded from the crystalline core and are in an amorphous state. The further investigations on the crystalline and amorphous phase structures and sizes by small-angle X-ray scattering (SAXS) method have provided quantitative evidence that the existence of second comonomers increases the amorphous thickness of copolyesters but that the influences of comonomers on the lamellar crystal structure and size of copolyesters are complicated. The origin of the complexity and its influences on the equilibrium melting temperature T(m)(0) of copolyester are discussed in the present paper. Gibbs-Thomson and Hoffman-Weeks equations were applied for the determination of T(m)(0) of PBS, P(BS-co-14 mol %ES), and P(BS-co-15 mol %HS)-three samples. Two equations gave different T(m)(0) values for each sample. On the basis of the Gibbs-Thomson equation, the P(BS-co-15 mol %HS) copolyester has the same T(m)(0) value as that of the PBS homopolymer, while the P(BS-co-14 mol %ES) copolyester has a lower one. This is due to the different influences of the second comonomers on the crystalline phase structure indicated by SAXS results, and the Gibbs-Thomson equation has been suggested to be more reliable. The crystal growth kinetics of the three samples was analyzed by using the secondary nucleation theory, and the influences of various parameters on the regime transition and nucleation constant were studied. Meanwhile some interrelations between regime transition temperature and melting behavior were found for the three samples.

Biodegradation, Environmental↗

Distribution of polycyclic aromatic hydrocarbons in aerosols and dustfall in Macao.

Polycyclic aromatic hydrocarbons (PAHs), widespread environmental pollutants, have been measured in aerosols and dustfall in Macao. In this paper, we compare concentration distributions and determine the partitioning of PAHs in aerosols and dustfall for different areas, sampling times and sampling heights. The results demonstrate that the concentrations of sigmaPAHs in aerosols and dustfall vary at the different sites and heights. The concentrations of sigmaPAHs and most of the individual PAHs in aerosols at night were higher than those in the daytime when using the unit of microg/g and lower than those when using the unit of microg m(-3). It is shown that the distribution of individual PAHs in aerosols differs significantly from that in dustfall.

Aerosols↗

[Water distribution and microclimatic effects of sprinkler irrigation on spring wheat field].

Measurements of sprinkler irrigation on spring wheat field indicated that spring wheat canopy could intercept water by 25-30%, and compared with that above canopy in first milking period, the uniformity coefficient below canopy could be increased by 7-9%. Floating and evaporation loss of sprinkler irrigation water could reach 20-25% of the total. In addition, sprinkler irrigation on spring wheat field could decrease air and soil temperature, and increase air actual vapor pressure and relative humidity, which played a definite role in restraining crop transpiration.

Microclimate↗

Spin dynamics of polarization inversion spin exchange at the magic angle in multiple spin systems.

Polarization inversion spin exchange at the magic angle (PISEMA) [J. Magn. Reson. A 109, 270 (1994)] is an important experiment in NMR structural characterization of membrane proteins in oriented lipid bilayers. This paper presents a theoretical and experimental study of the spin dynamics in PISEMA to investigate the line-narrowing mechanism. The study focuses on the effect of neighboring protons on the spin exchange of a strongly coupled spin pair. The spin exchange is solved analytically for simple spin systems and is numerically simulated for many-spin systems. The results show that the dipolar couplings from the neighboring protons of a strongly coupled spin pair perturb the spin exchange only in the second order, therefore it has little contribution to the linewidth of PISEMA spectra in comparison to the separated-local-field spectra. The effects from proton resonance offset and the mismatch of the Hartmann-Hahn condition are also discussed along with experimental results using model single-crystal samples.

Magnetic Resonance Spectroscopy↗

Imaging membrane protein helical wheels.

Resonance patterns have been observed in 2D solid-state NMR spectra of the transmembrane segment of M2 protein from Influenza A virus in oriented samples reflecting the helical wheel of this alpha-helix. The center of this pattern uniquely defines the helical tilt with respect to the bilayer normal without a need for resonance assignments. The distribution of resonances from amino acid specific labels around the "PISA wheel" defines the rotational orientation of the helix and yields preliminary site-specific assignments. With assignments high-resolution structural detail, such as differences in tilt and rotational orientation along the helical axis leading to an assessment of helical coiling, can be obtained.

Influenza A virus↗

Biodegradable poly(ethylene succinate) (PES). 1. Crystal growth kinetics and morphology.

Crystal growth rates of melt-crystallized poly(ethylene succinate) (PES) with a number-average molecular weight Mn of 21,100 and polydispersity of 1.86, respectively, were studied in an extensive temperature range. On the basis of secondary nucleation theory, only one transition between regime III and regime II was found at around 71 degrees C, but no transition of regime II-->I was detected by kinetic analysis. The ratio of nucleation constants KgIII in regime III to KgII in regime II was influenced by the value of activation energy U*, and tended to 2 as predicted by the theory when U* was set as 3688 cal/mol. The morphological changes at spherulitic level and lamellar level in regime II and regime III were examined by using an optical microscope (OM) and atomic force microscope (AFM). Although spherulitic morphologies were found in both regime II and regime III by optical microscopy, further investigations made by following the crystallization process using OM and by checking the lamellar morphology using AFM revealed morphological changes during the crystal growth process and different crystal morphologies in regime II and regime III. Meanwhile by using ultrathin film (approximately 100 nm in thickness), the morphology of lamellar crystals of lozenge-shape outline and composed of single crystals has been studied by AFM technique. The results indicate that there is indeed a transition from regime II to regime III at around 71 degrees C for the isothermal crystallization of PES with an increasing degree of undercooling.

Biodegradation, Environmental↗

Biodegradable poly(ethylene succinate) (PES). 2. Crystal morphology of melt-crystallized ultrathin film and its change after enzymatic degradation.

Poly(ethylene succinate) (PES) ultrathin films with an initial thickness of approximately 100 nm were prepared by the solution cast method on either cover glass or freshly cleaved mica as the substrate. The ultrathin films were then melt-crystallized at a given temperature for a certain period of time. The surface morphologies of these films on the substrates were observed by an atomic force microscope (AFM) and an optical microscope (OM) under ambient conditions. Two different crystal morphologies having fibril-like structure and flat-on lamellar crystals with a certain width were formed, and their growth mechanisms were discussed in association with previous kinetic data. It has been shown that at a higher crystallization temperature such as 85 degrees C (smaller degree of undercooling) the crystal aggregates tend to form lozenge-shaped hedrites which evolved from a single crystal. The enzymatic degradation of PES crystals on the ultrathin films was carried out by using a PHB depolymerase from Pseudomonas stutzeri at room temperature. The crystal morphologies before and after enzymatic degradation were examined by AFM. The lamellar crystals were hydrolyzed into many small fragments, and these fragments had the same thickness as that of the lamellar crystals before enzymatic degradation. The analysis of morphological results for PES lamellar crystals has revealed the existence of many defects on the surface of melt-crystallized lamellar crystals. These defects were preferentially attacked by the enzyme molecules. Hydrolysis starts from the chains folding in crystal defect area and proceeds along the lateral edges, i.e., along the direction perpendicular to the folding chain.

Biodegradation, Environmental↗

Isolation, affinity purification, and identification of piglet small intestine mucosa receptor for enterotoxigenic Escherichia coli k88ac+ fimbriae.

An affinity chromatography technique was utilized to isolate and purify the receptors of Escherichia coli K88ac(+) fimbriae from the mucus of the small intestines of newborn piglets. Purified K88ac+ fimbriae were covalently immobilized onto a beaded agarose matrix (Sepharose 4B). The immobilized fimbriae were used for the affinity purification of the K88ac+ receptors. Only two major proteins were tightly and specifically bound to the immobilized fimbriae after the column containing bound receptor was washed exhaustively with a buffer containing a high concentration of salt and a detergent. The receptors were eluted as a single component at a low pH. The isolated proteins were then subjected to enzyme-linked immunosorbent assay, sodium dodecyl sulfate-polyacrylamide gel electrophoresis, and Western blot (immunoblot) analyses. The two proteins were of high purity, were responsible for nearly all of the fimbrial binding capacity of the crude mucus, and had molecular masses of 26 and 41 kDa. The method for isolation of E. coli binding proteins is simple and yields purified intestinal receptors in a single chromatographic run. The intestinal mucus of different piglets has different proportions of the two receptor proteins.

Animals↗

Active-latent glycosylation strategy toward Lewis X pentasaccharide in a form suitable for neoglycoconjugate syntheses.

Glycosylation of 4-nitrophenyl 2-acetamido-6-O-tert-butyldiphenylsilyl-2-deoxy-1-thio-beta-D-gluc opyranoside with phenyl 2,3,4,6-tetra-O-benzoyl-1-thio-beta-D-galactopyranoside in the presence of NIS and TfOH as catalyst gave the lactosamine derivative regiospecifically in high yield. Further 3-O-fucosylation with phenyl 2,3,4-tri-O-benzyl-1-thio-beta-L-fucopyranoside using DMTST as promoter afforded the Lex trisaccharide intermediate. The latent glycosyl donor was transformed into its active form (p-acetamidothiophenyl) by reduction with zinc in acetic acid and N-acetylation. Glycosidation with p-nitrothiophenyl lactoside acceptor in the presence of NIS/TfOH as catalyst gave the Lex pentasaccharide in 71% yield.

Carbohydrate Conformation↗

[Detection of fungi from agricultural commodities with serological method].

The types of fungus antigen and the purification of fungus antigen, the purification of anti-fungus antibody, and the application of serology in detecting fungi from agricultural commodities are introduced. Fungi antigen are mainly from extra-cellular protein and extra-cellular polysaccharide. The method for antigen purification was the same as the common method used to separate and purify proteins and polysaccharides. The specificity of an antibody is the most important parameter for the quality of antibody. As long as the specificity of a antibody is high, the antibody could detect the target fungi from agricultural commodities.

Animals↗

Protease and protease inhibitor assays using biotinylated casein coated on a solid phase.

A new type of solid-phase assay for proteases and protease inhibitors has been developed using biotinylated casein. The assay involves coating of titer plate wells with biotinylated casein, hydrolysis of this substrate with a protease such as trypsin, reaction of the biotin from the unhydrolyzed substrate with an alkaline phosphatase-streptavidin complex, and finally quantification of the amount of casein remaining on the plate using alkaline phosphatase activity as the indicator. The activity of the bound indicator enzyme is oppositely related to the protease activity of the sample. In addition, the assay can be modified for quantitating the corresponding amount of protease inhibitor in the sample. The assay is simple, sensitive, accurate, inexpensive, and amenable to automation.

Biotinylation↗

Colorimetric competitive inhibition method for the quantification of avidin, streptavidin and biotin.

A colorimetric competitive inhibition assay for avidin, streptavidin and biotin was developed. The method for avidin or streptavidin was based on the competitive binding between avidin or streptavidin and a streptavidin-enzyme conjugate for biotinylated dextrin immobilized on the surface of a microtitre plate. For biotin quantitation the competition is between free biotin and the immobilized biotin for the streptavidin-enzyme conjugate. The limits of detection which was determined as the concentration of competitor required to give 90% of maximal absorbency (100% inhibition) was approximately 20 ng/100 microl per assay for avidin and streptavidin and 0.4 pg/100 microl per assay for biotin. The methods are simple, rapid, highly sensitive and adaptable to high throughput analysis.

Avidin↗