Gramene: a resource for comparative grass genomics.

Doreen Ware; Pankaj Jaiswal; Junjian Ni; Xiaokang Pan; Kuan Chang; Kenneth Clark; Leonid Teytelman; Steve Schmidt; Wei Zhao; Samuel Cartinhour; Susan McCouch; Lincoln Stein

doi:10.1093/nar/30.1.103

PubMed · 11752266

Gramene: a resource for comparative grass genomics.

Doreen Ware·Pankaj Jaiswal·Junjian Ni·Xiaokang Pan·Kuan Chang·Kenneth Clark·Leonid Teytelman·Steve Schmidt·Wei Zhao·Samuel Cartinhour·Susan McCouch·Lincoln Stein

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Abstract

Gramene (http://www.gramene.org) is a comparative genome mapping database for grasses and a community resource for rice. Rice, in addition to being an economically important crop, is also a model monocot for understanding other agronomically important grass genomes. Gramene replaces the existing AceDB database 'RiceGenes' with a relational database based on Oracle. Gramene provides curated and integrative information about maps, sequence, genes, genetic markers, mutants, QTLs, controlled vocabularies and publications. Its aims are to use the rice genetic, physical and sequence maps as fundamental organizing units, to provide a common denominator for moving from one crop grass to another and is to serve as a portal for interconnecting with other web-based crop grass resources. This paper describes the initial steps we have taken towards realizing these goals.

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Chromosome Mapping Computer Graphics Database Management Systems Databases, Genetic Forecasting Genes, Plant Genetic Markers Genome, Plant Information Storage and Retrieval Internet Mutation Oryza Poaceae Quantitative Trait, Heritable Sequence Homology Journal Article Research Support, U.S. Gov't, Non-P.H.S.

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Doreen Ware, Pankaj Jaiswal, Junjian Ni, Xiaokang Pan, Kuan Chang, Kenneth Clark, Leonid Teytelman, Steve Schmidt, Wei Zhao, Samuel Cartinhour, Susan McCouch, Lincoln Stein. 2002-01-01. Gramene: a resource for comparative grass genomics.. https://doi.org/10.1093/nar%2F30.1.103

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