SCOR: a Structural Classification of RNA database.

Peter S Klosterman; Makio Tamura; Stephen R Holbrook; Steven E Brenner

doi:10.1093/nar/30.1.392

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SCOR: a Structural Classification of RNA database.

Peter S Klosterman·Makio Tamura·Stephen R Holbrook·Steven E Brenner

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Abstract

The Structural Classification of RNA (SCOR) database provides a survey of the three-dimensional motifs contained in 259 NMR and X-ray RNA structures. In one classification, the structures are grouped according to function. The RNA motifs, including internal and external loops, are also organized in a hierarchical classification. The 259 database entries contain 223 internal and 203 external loops; 52 entries consist of fully complementary duplexes. A classification of the well-characterized tertiary interactions found in the larger RNA structures is also included along with examples. The SCOR database is accessible at http://scor.lbl.gov.

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Animals Base Pairing Conserved Sequence Crystallography, X-Ray Databases, Nucleic Acid Forecasting Information Storage and Retrieval Internet Nuclear Magnetic Resonance, Biomolecular Nucleic Acid Conformation RNA Structure-Activity Relationship User-Computer Interface Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, P.H.S.

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Peter S Klosterman, Makio Tamura, Stephen R Holbrook, Steven E Brenner. 2002-01-01. SCOR: a Structural Classification of RNA database.. https://doi.org/10.1093/nar%2F30.1.392

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